RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 GRXCR1A8MXD5 290 aa20.96■□□□□ 0.95
HMGN1-207ENST00000436324 ATP9AO75110 1047 aa20.96■□□□□ 0.95
HMGN1-207ENST00000436324 LGALS2P05162 132 aa20.96■□□□□ 0.95
HMGN1-207ENST00000436324 AKAP17AQ02040 695 aaKnown RBP20.96■□□□□ 0.95
HMGN1-207ENST00000436324 BFSP2Q13515 415 aa20.96■□□□□ 0.95
HMGN1-207ENST00000436324 CTAGE1Q96RT6 745 aa20.96■□□□□ 0.95
HMGN1-207ENST00000436324 GPR20Q99678 358 aa20.96■□□□□ 0.95
HMGN1-207ENST00000436324 ANO3Q9BYT9 981 aa20.96■□□□□ 0.95
HMGN1-207ENST00000436324 PRPF3O43395 683 aaKnown RBP20.95■□□□□ 0.94
HMGN1-207ENST00000436324 IQCF3P0C7M6 154 aa20.95■□□□□ 0.94
HMGN1-207ENST00000436324 MTMR1Q13613 665 aa20.95■□□□□ 0.94
HMGN1-207ENST00000436324 PKN1Q16512 942 aa20.95■□□□□ 0.94
HMGN1-207ENST00000436324 JAKMIP3Q5VZ66 844 aa20.95■□□□□ 0.94
HMGN1-207ENST00000436324 HERVK_113Q902F9 699 aa20.95■□□□□ 0.94
HMGN1-207ENST00000436324 VWCEQ96DN2 955 aa20.95■□□□□ 0.94
HMGN1-207ENST00000436324 CDHR1Q96JP9 859 aa20.95■□□□□ 0.94
HMGN1-207ENST00000436324 SENP7Q9BQF6 1050 aa20.95■□□□□ 0.94
HMGN1-207ENST00000436324 SLC26A6Q9BXS9 759 aa20.95■□□□□ 0.94
HMGN1-207ENST00000436324 TM6SF1Q9BZW5 370 aa20.95■□□□□ 0.94
HMGN1-207ENST00000436324 PDRG1Q9NUG6 133 aa20.95■□□□□ 0.94
HMGN1-207ENST00000436324 CXXC1Q9P0U4 656 aaPredicted RBP20.95■□□□□ 0.94
HMGN1-207ENST00000436324 NID2Q14112 1375 aa20.95■□□□□ 0.94
HMGN1-207ENST00000436324 H3BRB1 525 aa20.94■□□□□ 0.94
HMGN1-207ENST00000436324 FOSP01100 380 aaPredicted RBP20.94■□□□□ 0.94
HMGN1-207ENST00000436324 KCNA2P16389 499 aa20.94■□□□□ 0.94
HMGN1-207ENST00000436324 STK3Q13188 491 aa20.94■□□□□ 0.94
HMGN1-207ENST00000436324 HIC1Q14526 733 aa20.94■□□□□ 0.94
HMGN1-207ENST00000436324 NTRK3Q16288 839 aa20.94■□□□□ 0.94
HMGN1-207ENST00000436324 RASIP1Q5U651 963 aa20.94■□□□□ 0.94
HMGN1-207ENST00000436324 TRIM50Q86XT4 487 aa20.94■□□□□ 0.94
HMGN1-207ENST00000436324 CCDC155Q8N6L0 562 aa20.94■□□□□ 0.94
HMGN1-207ENST00000436324 CYP2W1Q8TAV3 490 aa20.94■□□□□ 0.94
HMGN1-207ENST00000436324 DHX38Q92620 1227 aaKnown RBP20.94■□□□□ 0.94
HMGN1-207ENST00000436324 MTIF3Q9H2K0 278 aaKnown RBP20.94■□□□□ 0.94
HMGN1-207ENST00000436324 TUT1Q9H6E5 874 aaKnown RBP20.94■□□□□ 0.94
HMGN1-207ENST00000436324 JADE2Q9NQC1 790 aa20.94■□□□□ 0.94
HMGN1-207ENST00000436324 ZBBXA8MT70 800 aa20.93■□□□□ 0.94
HMGN1-207ENST00000436324 PITPNM1O00562 1244 aa20.93■□□□□ 0.94
HMGN1-207ENST00000436324 ADAMTS3O15072 1205 aa20.93■□□□□ 0.94
HMGN1-207ENST00000436324 EVCP57679 992 aa20.93■□□□□ 0.94
HMGN1-207ENST00000436324 GIMAP8Q8ND71 665 aaPredicted RBP20.93■□□□□ 0.94
HMGN1-207ENST00000436324 MXRA8Q9BRK3 442 aa20.93■□□□□ 0.94
HMGN1-207ENST00000436324 FTOQ9C0B1 505 aaKnown RBP eCLIP20.93■□□□□ 0.947e-6■■□□□ 12.9
HMGN1-207ENST00000436324 GLT8D2Q9H1C3 349 aa20.93■□□□□ 0.94
HMGN1-207ENST00000436324 SEMA6BQ9H3T3 888 aa20.93■□□□□ 0.94
HMGN1-207ENST00000436324 SZT2Q5T011 3432 aa20.93■□□□□ 0.94
HMGN1-207ENST00000436324 LAMA3Q16787 3333 aa20.92■□□□□ 0.94
HMGN1-207ENST00000436324 RBAK-RBAKDNI3L0D1 243 aa20.92■□□□□ 0.94
HMGN1-207ENST00000436324 SMIM10L2AP0DMW4 78 aa20.92■□□□□ 0.94
HMGN1-207ENST00000436324 SMIM10L2BP0DMW5 78 aa20.92■□□□□ 0.94
HMGN1-207ENST00000436324 IFNAR1P17181 557 aa20.92■□□□□ 0.94
HMGN1-207ENST00000436324 ZNF76P36508 570 aa20.92■□□□□ 0.94
HMGN1-207ENST00000436324 PBX2P40425 430 aa20.92■□□□□ 0.94
HMGN1-207ENST00000436324 CLK2P49760 499 aaKnown RBP20.92■□□□□ 0.94
HMGN1-207ENST00000436324 CAGE1Q8TC20 777 aa20.92■□□□□ 0.94
HMGN1-207ENST00000436324 GUCD1Q96NT3 240 aa20.92■□□□□ 0.94
HMGN1-207ENST00000436324 TTYH1Q9H313 450 aaPredicted RBP20.92■□□□□ 0.94
HMGN1-207ENST00000436324 C6orf50Q9HD87 102 aa20.92■□□□□ 0.94
HMGN1-207ENST00000436324 C17orf102A2RUQ5 167 aa20.91■□□□□ 0.94
HMGN1-207ENST00000436324 ARP10275 920 aa20.91■□□□□ 0.94
HMGN1-207ENST00000436324 DNAJB2P25686 324 aa20.91■□□□□ 0.94
HMGN1-207ENST00000436324 RFC2P35250 354 aa20.91■□□□□ 0.94
HMGN1-207ENST00000436324 PTK7Q13308 1070 aa20.91■□□□□ 0.94
HMGN1-207ENST00000436324 AP3B2Q13367 1082 aa20.91■□□□□ 0.94
HMGN1-207ENST00000436324 CCDC12Q8WUD4 166 aaPredicted RBP20.91■□□□□ 0.94
HMGN1-207ENST00000436324 WNT8BQ93098 351 aa20.91■□□□□ 0.94
HMGN1-207ENST00000436324 RNF26Q9BY78 433 aaPredicted RBP20.91■□□□□ 0.94
HMGN1-207ENST00000436324 KCNH7Q9NS40 1196 aa20.91■□□□□ 0.94
HMGN1-207ENST00000436324 DOCK5Q9H7D0 1870 aa20.9■□□□□ 0.94
HMGN1-207ENST00000436324 PFKMP08237 780 aa20.9■□□□□ 0.94
HMGN1-207ENST00000436324 CKBP12277 381 aa20.9■□□□□ 0.94
HMGN1-207ENST00000436324 SELPP16109 830 aa20.9■□□□□ 0.94
HMGN1-207ENST00000436324 TCF7P36402 384 aaPredicted RBP20.9■□□□□ 0.94
HMGN1-207ENST00000436324 SREBF1P36956 1147 aa20.9■□□□□ 0.94
HMGN1-207ENST00000436324 SSRP1Q08945 709 aaKnown RBP20.9■□□□□ 0.94
HMGN1-207ENST00000436324 CEP55Q53EZ4 464 aa20.9■□□□□ 0.94
HMGN1-207ENST00000436324 LRRC8DQ7L1W4 858 aa20.9■□□□□ 0.94
HMGN1-207ENST00000436324 AFAP1L1Q8TED9 768 aa20.9■□□□□ 0.94
HMGN1-207ENST00000436324 SEPT1Q8WYJ6 367 aa20.9■□□□□ 0.94
HMGN1-207ENST00000436324 ATP6V0A1Q93050 837 aa20.9■□□□□ 0.94
HMGN1-207ENST00000436324 ZNF274Q96GC6 653 aaPredicted RBP20.9■□□□□ 0.94
HMGN1-207ENST00000436324 PBX4Q9BYU1 374 aa20.9■□□□□ 0.94
HMGN1-207ENST00000436324 ZMYND12Q9H0C1 365 aa20.9■□□□□ 0.94
HMGN1-207ENST00000436324 RNPEPQ9H4A4 650 aa20.9■□□□□ 0.94
HMGN1-207ENST00000436324 SETD4Q9NVD3 440 aa20.9■□□□□ 0.94
HMGN1-207ENST00000436324 VPS54Q9P1Q0 977 aa20.9■□□□□ 0.94
HMGN1-207ENST00000436324 ZNF215Q9UL58 517 aaPredicted RBP20.9■□□□□ 0.94
HMGN1-207ENST00000436324 SLC4A7Q9Y6M7 1214 aa20.9■□□□□ 0.94
HMGN1-207ENST00000436324 GSTTP1A0A1W2PQM5 241 aa20.89■□□□□ 0.93
HMGN1-207ENST00000436324 ESYT2A0FGR8 921 aa20.89■□□□□ 0.93
HMGN1-207ENST00000436324 CPLX1O14810 134 aa20.89■□□□□ 0.93
HMGN1-207ENST00000436324 MAFGO15525 162 aa20.89■□□□□ 0.93
HMGN1-207ENST00000436324 ARHGAP4P98171 946 aa20.89■□□□□ 0.93
HMGN1-207ENST00000436324 TEX2Q8IWB9 1127 aa20.89■□□□□ 0.93
HMGN1-207ENST00000436324 RASGRP4Q8TDF6 673 aa20.89■□□□□ 0.93
HMGN1-207ENST00000436324 TIFAQ96CG3 184 aa20.89■□□□□ 0.93
HMGN1-207ENST00000436324 UIMC1Q96RL1 719 aa20.89■□□□□ 0.93
HMGN1-207ENST00000436324 TREHO43280 583 aa20.88■□□□□ 0.93
HMGN1-207ENST00000436324 ACTN1P12814 892 aa20.88■□□□□ 0.93
HMGN1-207ENST00000436324 MARK3P27448 753 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms