RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 WTAPQ15007 396 aa8.98□□□□□ -0.97
VPS50-203ENST00000436177 KIAA0753Q2KHM9 967 aa8.98□□□□□ -0.97
VPS50-203ENST00000436177 TTC22Q5TAA0 569 aa8.98□□□□□ -0.97
VPS50-203ENST00000436177 GDF6Q6KF10 455 aaPredicted RBP8.98□□□□□ -0.97
VPS50-203ENST00000436177 CATIPQ7Z7H3 387 aa8.98□□□□□ -0.97
VPS50-203ENST00000436177 SESTD1Q86VW0 696 aa8.98□□□□□ -0.97
VPS50-203ENST00000436177 FCHSD1Q86WN1 690 aa8.98□□□□□ -0.97
VPS50-203ENST00000436177 SAMD3Q8N6K7 520 aa8.98□□□□□ -0.97
VPS50-203ENST00000436177 ARNTL2Q8WYA1 636 aa8.98□□□□□ -0.97
VPS50-203ENST00000436177 TBC1D5Q92609 795 aa8.98□□□□□ -0.97
VPS50-203ENST00000436177 EMID1Q96A84 441 aaPredicted RBP8.98□□□□□ -0.97
VPS50-203ENST00000436177 UHRF1Q96T88 793 aaPredicted RBP8.98□□□□□ -0.97
VPS50-203ENST00000436177 IRX2Q9BZI1 471 aaPredicted RBP8.98□□□□□ -0.97
VPS50-203ENST00000436177 CERS4Q9HA82 394 aa8.98□□□□□ -0.97
VPS50-203ENST00000436177 MLXIPQ9HAP2 919 aa8.98□□□□□ -0.97
VPS50-203ENST00000436177 SEC63Q9UGP8 760 aaKnown RBP8.98□□□□□ -0.97
VPS50-203ENST00000436177 SORBS3O60504 671 aa8.97□□□□□ -0.97
VPS50-203ENST00000436177 PPFIA4O75335 1185 aa8.97□□□□□ -0.97
VPS50-203ENST00000436177 GGPS1O95749 300 aa8.97□□□□□ -0.97
VPS50-203ENST00000436177 F2P00734 622 aa8.97□□□□□ -0.97
VPS50-203ENST00000436177 KIF5BP33176 963 aa8.97□□□□□ -0.97
VPS50-203ENST00000436177 PTK7Q13308 1070 aa8.97□□□□□ -0.97
VPS50-203ENST00000436177 IKBKEQ14164 716 aa8.97□□□□□ -0.97
VPS50-203ENST00000436177 GRM4Q14833 912 aa8.97□□□□□ -0.97
VPS50-203ENST00000436177 CNKSR3Q6P9H4 555 aa8.97□□□□□ -0.97
VPS50-203ENST00000436177 STAG2Q8N3U4 1231 aa8.97□□□□□ -0.97
VPS50-203ENST00000436177 NCOA7Q8NI08 942 aa8.97□□□□□ -0.97
VPS50-203ENST00000436177 CTCFLQ8NI51 663 aaPredicted RBP8.97□□□□□ -0.97
VPS50-203ENST00000436177 CUL5Q93034 780 aa8.97□□□□□ -0.97
VPS50-203ENST00000436177 PDCD2LQ9BRP1 358 aa8.97□□□□□ -0.97
VPS50-203ENST00000436177 KIAA1468Q9P260 1216 aa8.97□□□□□ -0.97
VPS50-203ENST00000436177 HDAC6Q9UBN7 1215 aa8.97□□□□□ -0.97
VPS50-203ENST00000436177 GTF2IRD1Q9UHL9 959 aa8.97□□□□□ -0.97
VPS50-203ENST00000436177 DDX41Q9UJV9 622 aaKnown RBP8.97□□□□□ -0.97
VPS50-203ENST00000436177 EMSYQ7Z589 1322 aa8.97□□□□□ -0.97
VPS50-203ENST00000436177 LAMA4Q16363 1823 aa8.96□□□□□ -0.97
VPS50-203ENST00000436177 LCTP09848 1927 aa8.96□□□□□ -0.97
VPS50-203ENST00000436177 CHD7Q9P2D1 2997 aa8.96□□□□□ -0.97
VPS50-203ENST00000436177 SCN10AQ9Y5Y9 1956 aa8.96□□□□□ -0.98
VPS50-203ENST00000436177 PNMA6FA0A0J9YX94 578 aa8.96□□□□□ -0.98
VPS50-203ENST00000436177 ABHD14A-ACY1A0A1B0GW23 586 aa8.96□□□□□ -0.98
VPS50-203ENST00000436177 DPYSL4O14531 572 aa8.96□□□□□ -0.98
VPS50-203ENST00000436177 TGFB3P10600 412 aa8.96□□□□□ -0.98
VPS50-203ENST00000436177 CKBP12277 381 aa8.96□□□□□ -0.98
VPS50-203ENST00000436177 UBA1P22314 1058 aaKnown RBP8.96□□□□□ -0.98
VPS50-203ENST00000436177 WDR5P61964 334 aaKnown RBP8.96□□□□□ -0.98
VPS50-203ENST00000436177 TAP1Q03518 808 aa8.96□□□□□ -0.98
VPS50-203ENST00000436177 PGM5Q15124 567 aa8.96□□□□□ -0.98
VPS50-203ENST00000436177 SEC23AQ15436 765 aa8.96□□□□□ -0.98
VPS50-203ENST00000436177 CELF3Q5SZQ8 465 aaKnown RBP8.96□□□□□ -0.98
VPS50-203ENST00000436177 CASC1Q6TDU7 716 aa8.96□□□□□ -0.98
VPS50-203ENST00000436177 NFXL1Q6ZNB6 911 aa8.96□□□□□ -0.98
VPS50-203ENST00000436177 STOX1Q6ZVD7 989 aa8.96□□□□□ -0.98
VPS50-203ENST00000436177 CYB5R4Q7L1T6 521 aa8.96□□□□□ -0.98
VPS50-203ENST00000436177 PIBF1Q8WXW3 757 aa8.96□□□□□ -0.98
VPS50-203ENST00000436177 KAT2BQ92831 832 aa8.96□□□□□ -0.98
VPS50-203ENST00000436177 RRP36Q96EU6 259 aaKnown RBP8.96□□□□□ -0.98
VPS50-203ENST00000436177 PIGSQ96S52 555 aa8.96□□□□□ -0.98
VPS50-203ENST00000436177 SEPT9Q9UHD8 586 aaPredicted RBP8.96□□□□□ -0.98
VPS50-203ENST00000436177 MAD2L2Q9UI95 211 aa8.96□□□□□ -0.98
VPS50-203ENST00000436177 ZNF215Q9UL58 517 aaPredicted RBP8.96□□□□□ -0.98
VPS50-203ENST00000436177 C17orf102A2RUQ5 167 aa8.95□□□□□ -0.98
VPS50-203ENST00000436177 PALM3A6NDB9 673 aaPredicted RBP8.95□□□□□ -0.98
VPS50-203ENST00000436177 PPP1R11O60927 126 aaPredicted RBP8.95□□□□□ -0.98
VPS50-203ENST00000436177 STAM2O75886 525 aa8.95□□□□□ -0.98
VPS50-203ENST00000436177 DDAH1O94760 285 aa8.95□□□□□ -0.98
VPS50-203ENST00000436177 AMHP03971 560 aa8.95□□□□□ -0.98
VPS50-203ENST00000436177 CYP21A2P08686 494 aa8.95□□□□□ -0.98
VPS50-203ENST00000436177 GNAT1P11488 350 aa8.95□□□□□ -0.98
VPS50-203ENST00000436177 GSPT1P15170 499 aaKnown RBP8.95□□□□□ -0.98
VPS50-203ENST00000436177 CHMLP26374 656 aa8.95□□□□□ -0.98
VPS50-203ENST00000436177 THPOP40225 353 aa8.95□□□□□ -0.98
VPS50-203ENST00000436177 GHRHRQ02643 423 aa8.95□□□□□ -0.98
VPS50-203ENST00000436177 RBL2Q08999 1139 aa8.95□□□□□ -0.98
VPS50-203ENST00000436177 NEDD9Q14511 834 aa8.95□□□□□ -0.98
VPS50-203ENST00000436177 MYSM1Q5VVJ2 828 aa8.95□□□□□ -0.98
VPS50-203ENST00000436177 FAM117BQ6P1L5 589 aa8.95□□□□□ -0.98
VPS50-203ENST00000436177 VSIG10LQ86VR7 867 aa8.95□□□□□ -0.98
VPS50-203ENST00000436177 IL31RAQ8NI17 732 aa8.95□□□□□ -0.98
VPS50-203ENST00000436177 SMARCC2Q8TAQ2 1214 aa8.95□□□□□ -0.98
VPS50-203ENST00000436177 DHX38Q92620 1227 aaKnown RBP8.95□□□□□ -0.98
VPS50-203ENST00000436177 VWCEQ96DN2 955 aa8.95□□□□□ -0.98
VPS50-203ENST00000436177 MTMR8Q96EF0 704 aa8.95□□□□□ -0.98
VPS50-203ENST00000436177 MTUS1Q9ULD2 1270 aa8.95□□□□□ -0.98
VPS50-203ENST00000436177 COG5Q9UP83 839 aa8.95□□□□□ -0.98
VPS50-203ENST00000436177 CCDC69A6NI79 296 aa8.94□□□□□ -0.98
VPS50-203ENST00000436177 RSPH10B2B2RC85 870 aa8.94□□□□□ -0.98
VPS50-203ENST00000436177 E7EWF7 191 aa8.94□□□□□ -0.98
VPS50-203ENST00000436177 H3BRB1 525 aa8.94□□□□□ -0.98
VPS50-203ENST00000436177 RFXAPO00287 272 aa8.94□□□□□ -0.98
VPS50-203ENST00000436177 OPLAHO14841 1288 aa8.94□□□□□ -0.98
VPS50-203ENST00000436177 FIBPO43427 364 aa8.94□□□□□ -0.98
VPS50-203ENST00000436177 LGR5O75473 907 aa8.94□□□□□ -0.98
VPS50-203ENST00000436177 RGS20O76081 388 aa8.94□□□□□ -0.98
VPS50-203ENST00000436177 CXCL10P02778 98 aa8.94□□□□□ -0.98
VPS50-203ENST00000436177 RSPH10BP0C881 870 aa8.94□□□□□ -0.98
VPS50-203ENST00000436177 HOXD8P13378 290 aaPredicted RBP8.94□□□□□ -0.98
VPS50-203ENST00000436177 GNAQP50148 359 aa8.94□□□□□ -0.98
VPS50-203ENST00000436177 DEFB103AP81534 67 aa8.94□□□□□ -0.98
VPS50-203ENST00000436177 SP4Q02446 784 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms