RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 GNPTABQ3T906 1256 aa12.68□□□□□ -0.38
SPTLC1P4-201ENST00000435997 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.68□□□□□ -0.38
SPTLC1P4-201ENST00000435997 MB21D2Q8IYB1 491 aaPredicted RBP12.68□□□□□ -0.38
SPTLC1P4-201ENST00000435997 DBF4BQ8NFT6 615 aa12.68□□□□□ -0.38
SPTLC1P4-201ENST00000435997 IGDCC4Q8TDY8 1250 aa12.68□□□□□ -0.38
SPTLC1P4-201ENST00000435997 TUT1Q9H6E5 874 aaKnown RBP12.68□□□□□ -0.38
SPTLC1P4-201ENST00000435997 BCAS3Q9H6U6 928 aa12.68□□□□□ -0.38
SPTLC1P4-201ENST00000435997 BDP1A6H8Y1 2624 aa12.68□□□□□ -0.38
SPTLC1P4-201ENST00000435997 C17orf102A2RUQ5 167 aa12.67□□□□□ -0.38
SPTLC1P4-201ENST00000435997 RSPH10B2B2RC85 870 aa12.67□□□□□ -0.38
SPTLC1P4-201ENST00000435997 SPATA31C2B4DYI2 1134 aa12.67□□□□□ -0.38
SPTLC1P4-201ENST00000435997 E7EWF7 191 aa12.67□□□□□ -0.38
SPTLC1P4-201ENST00000435997 PIK3CDO00329 1044 aa12.67□□□□□ -0.38
SPTLC1P4-201ENST00000435997 SGSM2O43147 1006 aa12.67□□□□□ -0.38
SPTLC1P4-201ENST00000435997 FIBPO43427 364 aa12.67□□□□□ -0.38
SPTLC1P4-201ENST00000435997 SORBS3O60504 671 aa12.67□□□□□ -0.38
SPTLC1P4-201ENST00000435997 RSPH10BP0C881 870 aa12.67□□□□□ -0.38
SPTLC1P4-201ENST00000435997 THPOP40225 353 aa12.67□□□□□ -0.38
SPTLC1P4-201ENST00000435997 ADAM17P78536 824 aa12.67□□□□□ -0.38
SPTLC1P4-201ENST00000435997 FCHSD1Q86WN1 690 aa12.67□□□□□ -0.38
SPTLC1P4-201ENST00000435997 NCOA7Q8NI08 942 aa12.67□□□□□ -0.38
SPTLC1P4-201ENST00000435997 ZFP91Q96JP5 570 aaPredicted RBP12.67□□□□□ -0.38
SPTLC1P4-201ENST00000435997 MAP3K14Q99558 947 aa12.67□□□□□ -0.38
SPTLC1P4-201ENST00000435997 GPR20Q99678 358 aa12.67□□□□□ -0.38
SPTLC1P4-201ENST00000435997 ZBED2Q9BTP6 218 aa12.67□□□□□ -0.38
SPTLC1P4-201ENST00000435997 SPZ1Q9BXG8 430 aa12.67□□□□□ -0.38
SPTLC1P4-201ENST00000435997 C1QTNF1Q9BXJ1 281 aa12.67□□□□□ -0.38
SPTLC1P4-201ENST00000435997 USP26Q9BXU7 913 aa12.67□□□□□ -0.38
SPTLC1P4-201ENST00000435997 OSBPL7Q9BZF2 842 aa12.67□□□□□ -0.38
SPTLC1P4-201ENST00000435997 MLXIPQ9HAP2 919 aa12.67□□□□□ -0.38
SPTLC1P4-201ENST00000435997 RAPGEFL1Q9UHV5 662 aa12.67□□□□□ -0.38
SPTLC1P4-201ENST00000435997 TREHO43280 583 aa12.66□□□□□ -0.38
SPTLC1P4-201ENST00000435997 DDAH1O94760 285 aa12.66□□□□□ -0.38
SPTLC1P4-201ENST00000435997 NEDD9Q14511 834 aa12.66□□□□□ -0.38
SPTLC1P4-201ENST00000435997 WTAPQ15007 396 aa12.66□□□□□ -0.38
SPTLC1P4-201ENST00000435997 PCNX4Q63HM2 1172 aa12.66□□□□□ -0.38
SPTLC1P4-201ENST00000435997 RALYLQ86SE5 291 aaKnown RBP12.66□□□□□ -0.38
SPTLC1P4-201ENST00000435997 TRIM50Q86XT4 487 aa12.66□□□□□ -0.38
SPTLC1P4-201ENST00000435997 RUFY2Q8WXA3 655 aa12.66□□□□□ -0.38
SPTLC1P4-201ENST00000435997 ATP6V0A1Q93050 837 aa12.66□□□□□ -0.38
SPTLC1P4-201ENST00000435997 SENP7Q9BQF6 1050 aa12.66□□□□□ -0.38
SPTLC1P4-201ENST00000435997 RNPEPQ9H4A4 650 aa12.66□□□□□ -0.38
SPTLC1P4-201ENST00000435997 LY9Q9HBG7 655 aa12.66□□□□□ -0.38
SPTLC1P4-201ENST00000435997 MTUS1Q9ULD2 1270 aa12.66□□□□□ -0.38
SPTLC1P4-201ENST00000435997 TELO2Q9Y4R8 837 aa12.66□□□□□ -0.38
SPTLC1P4-201ENST00000435997 INSL6Q9Y581 213 aa12.66□□□□□ -0.38
SPTLC1P4-201ENST00000435997 TRIP12Q14669 1992 aaPredicted RBP12.65□□□□□ -0.38
SPTLC1P4-201ENST00000435997 BRWD1Q9NSI6 2320 aa12.65□□□□□ -0.38
SPTLC1P4-201ENST00000435997 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.65□□□□□ -0.38
SPTLC1P4-201ENST00000435997 ERICH2A1L162 156 aa12.65□□□□□ -0.38
SPTLC1P4-201ENST00000435997 NOP56O00567 594 aaKnown RBP12.65□□□□□ -0.38
SPTLC1P4-201ENST00000435997 MEIS2O14770 477 aa12.65□□□□□ -0.38
SPTLC1P4-201ENST00000435997 AMHP03971 560 aa12.65□□□□□ -0.38
SPTLC1P4-201ENST00000435997 SMARCA1P28370 1054 aa12.65□□□□□ -0.38
SPTLC1P4-201ENST00000435997 SART3Q15020 963 aaKnown RBP12.65□□□□□ -0.38
SPTLC1P4-201ENST00000435997 FAM26DQ5JW98 314 aa12.65□□□□□ -0.38
SPTLC1P4-201ENST00000435997 CATIPQ7Z7H3 387 aa12.65□□□□□ -0.38
SPTLC1P4-201ENST00000435997 RPAINQ86UA6 219 aa12.65□□□□□ -0.38
SPTLC1P4-201ENST00000435997 MAP4K1Q92918 833 aa12.65□□□□□ -0.38
SPTLC1P4-201ENST00000435997 C17orf80Q9BSJ5 609 aa12.65□□□□□ -0.38
SPTLC1P4-201ENST00000435997 MTA3Q9BTC8 594 aa12.65□□□□□ -0.38
SPTLC1P4-201ENST00000435997 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.64□□□□□ -0.39
SPTLC1P4-201ENST00000435997 LINC00271P0C7V0 271 aa12.64□□□□□ -0.39
SPTLC1P4-201ENST00000435997 COL19A1Q14993 1142 aa12.64□□□□□ -0.39
SPTLC1P4-201ENST00000435997 FAM117BQ6P1L5 589 aa12.64□□□□□ -0.39
SPTLC1P4-201ENST00000435997 XRRA1Q6P2D8 792 aa12.64□□□□□ -0.39
SPTLC1P4-201ENST00000435997 CYFIP1Q7L576 1253 aa12.64□□□□□ -0.39
SPTLC1P4-201ENST00000435997 ZNF654Q8IZM8 581 aa12.64□□□□□ -0.39
SPTLC1P4-201ENST00000435997 MYOCDQ8IZQ8 938 aa12.64□□□□□ -0.39
SPTLC1P4-201ENST00000435997 LMBR1Q8WVP7 490 aa12.64□□□□□ -0.39
SPTLC1P4-201ENST00000435997 TOP1MTQ969P6 601 aa12.64□□□□□ -0.39
SPTLC1P4-201ENST00000435997 EPHX3Q9H6B9 360 aa12.64□□□□□ -0.39
SPTLC1P4-201ENST00000435997 UBE2ZQ9H832 354 aaPredicted RBP12.64□□□□□ -0.39
SPTLC1P4-201ENST00000435997 C11orf16Q9NQ32 467 aa12.64□□□□□ -0.39
SPTLC1P4-201ENST00000435997 SIP14410 1827 aa12.64□□□□□ -0.39
SPTLC1P4-201ENST00000435997 MYH6P13533 1939 aa12.64□□□□□ -0.39
SPTLC1P4-201ENST00000435997 CTSHP09668 335 aa12.63□□□□□ -0.39
SPTLC1P4-201ENST00000435997 KCNA2P16389 499 aa12.63□□□□□ -0.39
SPTLC1P4-201ENST00000435997 PLA2G5P39877 138 aa12.63□□□□□ -0.39
SPTLC1P4-201ENST00000435997 COL9A3Q14050 684 aaPredicted RBP12.63□□□□□ -0.39
SPTLC1P4-201ENST00000435997 LEXMQ3ZCV2 418 aa12.63□□□□□ -0.39
SPTLC1P4-201ENST00000435997 EPC2Q52LR7 807 aa12.63□□□□□ -0.39
SPTLC1P4-201ENST00000435997 USP17L6PQ6QN14 398 aa12.63□□□□□ -0.39
SPTLC1P4-201ENST00000435997 FBXO22Q8NEZ5 403 aa12.63□□□□□ -0.39
SPTLC1P4-201ENST00000435997 SEPT8Q92599 483 aa12.63□□□□□ -0.39
SPTLC1P4-201ENST00000435997 APBB2Q92870 758 aa12.63□□□□□ -0.39
SPTLC1P4-201ENST00000435997 KHSRPQ92945 711 aaKnown RBP eCLIP12.63□□□□□ -0.39
SPTLC1P4-201ENST00000435997 MRPL38Q96DV4 380 aaKnown RBP12.63□□□□□ -0.39
SPTLC1P4-201ENST00000435997 SAMD11Q96NU1 681 aa12.63□□□□□ -0.39
SPTLC1P4-201ENST00000435997 MYL10Q9BUA6 226 aa12.63□□□□□ -0.39
SPTLC1P4-201ENST00000435997 RC3H2Q9HBD1 1191 aaKnown RBP12.63□□□□□ -0.39
SPTLC1P4-201ENST00000435997 CD320Q9NPF0 282 aa12.63□□□□□ -0.39
SPTLC1P4-201ENST00000435997 SETD4Q9NVD3 440 aa12.63□□□□□ -0.39
SPTLC1P4-201ENST00000435997 RTEL1Q9NZ71 1219 aa12.63□□□□□ -0.39
SPTLC1P4-201ENST00000435997 ZNF215Q9UL58 517 aaPredicted RBP12.63□□□□□ -0.39
SPTLC1P4-201ENST00000435997 RBM8AQ9Y5S9 174 aaKnown RBP12.63□□□□□ -0.39
SPTLC1P4-201ENST00000435997 NRCAMQ92823 1304 aa12.62□□□□□ -0.39
SPTLC1P4-201ENST00000435997 MICAL3Q7RTP6 2002 aa12.62□□□□□ -0.39
SPTLC1P4-201ENST00000435997 MBLAC1A4D2B0 266 aaPredicted RBP12.62□□□□□ -0.39
SPTLC1P4-201ENST00000435997 SH2B2O14492 632 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms