RNA–Protein interactions for RNA: ENST00000434927.5

RBM39-214, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-214ENST00000434927 NEDD9Q14511 834 aa10.76□□□□□ -0.69
RBM39-214ENST00000434927 HIC1Q14526 733 aa10.76□□□□□ -0.69
RBM39-214ENST00000434927 TCTN1Q2MV58 587 aa10.76□□□□□ -0.69
RBM39-214ENST00000434927 XRRA1Q6P2D8 792 aa10.76□□□□□ -0.69
RBM39-214ENST00000434927 METTL7BQ6UX53 244 aa10.76□□□□□ -0.69
RBM39-214ENST00000434927 CATIPQ7Z7H3 387 aa10.76□□□□□ -0.69
RBM39-214ENST00000434927 GPKOWQ92917 476 aaPredicted RBP eCLIP10.76□□□□□ -0.698e-13■□□□□ 10.2
RBM39-214ENST00000434927 SENP7Q9BQF6 1050 aa10.76□□□□□ -0.69
RBM39-214ENST00000434927 SPZ1Q9BXG8 430 aa10.76□□□□□ -0.69
RBM39-214ENST00000434927 USP26Q9BXU7 913 aa10.76□□□□□ -0.69
RBM39-214ENST00000434927 TUT1Q9H6E5 874 aaKnown RBP10.76□□□□□ -0.69
RBM39-214ENST00000434927 MLXIPQ9HAP2 919 aa10.76□□□□□ -0.69
RBM39-214ENST00000434927 TAF6LQ9Y6J9 622 aa10.76□□□□□ -0.69
RBM39-214ENST00000434927 SIP14410 1827 aa10.76□□□□□ -0.69
RBM39-214ENST00000434927 REV3LO60673 3130 aa10.75□□□□□ -0.69
RBM39-214ENST00000434927 XIRP2A4UGR9 3374 aa10.75□□□□□ -0.69
RBM39-214ENST00000434927 RSPH10B2B2RC85 870 aa10.75□□□□□ -0.69
RBM39-214ENST00000434927 FIBPO43427 364 aa10.75□□□□□ -0.69
RBM39-214ENST00000434927 RSPH10BP0C881 870 aa10.75□□□□□ -0.69
RBM39-214ENST00000434927 KIF5BP33176 963 aa10.75□□□□□ -0.69
RBM39-214ENST00000434927 TFF2Q03403 129 aa10.75□□□□□ -0.69
RBM39-214ENST00000434927 SEMA3FQ13275 785 aa10.75□□□□□ -0.69
RBM39-214ENST00000434927 SKIV2LQ15477 1246 aaKnown RBP10.75□□□□□ -0.69
RBM39-214ENST00000434927 SPRED2Q7Z698 418 aa10.75□□□□□ -0.69
RBM39-214ENST00000434927 FCHSD1Q86WN1 690 aa10.75□□□□□ -0.69
RBM39-214ENST00000434927 ATP6V0A1Q93050 837 aa10.75□□□□□ -0.69
RBM39-214ENST00000434927 TGS1Q96RS0 853 aaKnown RBP10.75□□□□□ -0.69
RBM39-214ENST00000434927 LZTS2Q9BRK4 669 aa10.75□□□□□ -0.69
RBM39-214ENST00000434927 ZBED2Q9BTP6 218 aa10.75□□□□□ -0.69
RBM39-214ENST00000434927 TCF20Q9UGU0 1960 aaKnown RBP10.75□□□□□ -0.69
RBM39-214ENST00000434927 COL4A6Q14031 1691 aa10.75□□□□□ -0.69
RBM39-214ENST00000434927 LINC01553A4QN01 128 aa10.74□□□□□ -0.69
RBM39-214ENST00000434927 NOP56O00567 594 aaKnown RBP10.74□□□□□ -0.69
RBM39-214ENST00000434927 SMIM10L2AP0DMW4 78 aa10.74□□□□□ -0.69
RBM39-214ENST00000434927 SMIM10L2BP0DMW5 78 aa10.74□□□□□ -0.69
RBM39-214ENST00000434927 THPOP40225 353 aa10.74□□□□□ -0.69
RBM39-214ENST00000434927 HTRA4P83105 476 aaPredicted RBP10.74□□□□□ -0.69
RBM39-214ENST00000434927 PLEKHG4Q58EX7 1191 aa10.74□□□□□ -0.69
RBM39-214ENST00000434927 PCNX4Q63HM2 1172 aa10.74□□□□□ -0.69
RBM39-214ENST00000434927 KRT40Q6A162 431 aa10.74□□□□□ -0.69
RBM39-214ENST00000434927 TMCO2Q7Z6W1 182 aaPredicted RBP10.74□□□□□ -0.69
RBM39-214ENST00000434927 ZNF654Q8IZM8 581 aa10.74□□□□□ -0.69
RBM39-214ENST00000434927 TMTC2Q8N394 836 aa10.74□□□□□ -0.69
RBM39-214ENST00000434927 DBF4BQ8NFT6 615 aa10.74□□□□□ -0.69
RBM39-214ENST00000434927 CTCFLQ8NI51 663 aaPredicted RBP10.74□□□□□ -0.69
RBM39-214ENST00000434927 SP7Q8TDD2 431 aaPredicted RBP10.74□□□□□ -0.69
RBM39-214ENST00000434927 HLA-CQ95604 372 aa10.74□□□□□ -0.69
RBM39-214ENST00000434927 RRP36Q96EU6 259 aaKnown RBP10.74□□□□□ -0.69
RBM39-214ENST00000434927 GPR20Q99678 358 aa10.74□□□□□ -0.69
RBM39-214ENST00000434927 RNPEPQ9H4A4 650 aa10.74□□□□□ -0.69
RBM39-214ENST00000434927 SUGCTQ9HAC7 445 aa10.74□□□□□ -0.69
RBM39-214ENST00000434927 LY9Q9HBG7 655 aa10.74□□□□□ -0.69
RBM39-214ENST00000434927 INSL6Q9Y581 213 aa10.74□□□□□ -0.69
RBM39-214ENST00000434927 MEIS2O14770 477 aa10.73□□□□□ -0.69
RBM39-214ENST00000434927 TREHO43280 583 aa10.73□□□□□ -0.69
RBM39-214ENST00000434927 SORBS3O60504 671 aa10.73□□□□□ -0.69
RBM39-214ENST00000434927 AMHP03971 560 aa10.73□□□□□ -0.69
RBM39-214ENST00000434927 GNAT1P11488 350 aa10.73□□□□□ -0.69
RBM39-214ENST00000434927 LIFRP42702 1097 aa10.73□□□□□ -0.69
RBM39-214ENST00000434927 GNAQP50148 359 aa10.73□□□□□ -0.69
RBM39-214ENST00000434927 KCNQ1P51787 676 aa10.73□□□□□ -0.69
RBM39-214ENST00000434927 ADAM17P78536 824 aa10.73□□□□□ -0.69
RBM39-214ENST00000434927 CYFIP1Q7L576 1253 aa10.73□□□□□ -0.69
RBM39-214ENST00000434927 GIMAP8Q8ND71 665 aaPredicted RBP10.73□□□□□ -0.69
RBM39-214ENST00000434927 SMARCC2Q8TAQ2 1214 aa10.73□□□□□ -0.69
RBM39-214ENST00000434927 GDPD5Q8WTR4 605 aa10.73□□□□□ -0.69
RBM39-214ENST00000434927 CUL5Q93034 780 aa10.73□□□□□ -0.69
RBM39-214ENST00000434927 ZFP91Q96JP5 570 aaPredicted RBP10.73□□□□□ -0.69
RBM39-214ENST00000434927 TMEM87BQ96K49 555 aa10.73□□□□□ -0.69
RBM39-214ENST00000434927 BCAS3Q9H6U6 928 aa10.73□□□□□ -0.69
RBM39-214ENST00000434927 SEC63Q9UGP8 760 aaKnown RBP10.73□□□□□ -0.69
RBM39-214ENST00000434927 ZNF215Q9UL58 517 aaPredicted RBP10.73□□□□□ -0.69
RBM39-214ENST00000434927 SUPT16HQ9Y5B9 1047 aaKnown RBP10.73□□□□□ -0.69
RBM39-214ENST00000434927 RBM8AQ9Y5S9 174 aaKnown RBP10.73□□□□□ -0.69
RBM39-214ENST00000434927 KAT6AQ92794 2004 aa10.73□□□□□ -0.69
RBM39-214ENST00000434927 DOCK5Q9H7D0 1870 aa10.72□□□□□ -0.69
RBM39-214ENST00000434927 SH2B2O14492 632 aaPredicted RBP10.72□□□□□ -0.69
RBM39-214ENST00000434927 MCM5P33992 734 aa10.72□□□□□ -0.69
RBM39-214ENST00000434927 FAM26DQ5JW98 314 aa10.72□□□□□ -0.69
RBM39-214ENST00000434927 USP17L6PQ6QN14 398 aa10.72□□□□□ -0.69
RBM39-214ENST00000434927 CASC1Q6TDU7 716 aa10.72□□□□□ -0.69
RBM39-214ENST00000434927 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.72□□□□□ -0.694e-12■■■■■ 35.4
RBM39-214ENST00000434927 RPAINQ86UA6 219 aa10.72□□□□□ -0.69
RBM39-214ENST00000434927 NLRX1Q86UT6 975 aa10.72□□□□□ -0.69
RBM39-214ENST00000434927 TEX2Q8IWB9 1127 aa10.72□□□□□ -0.69
RBM39-214ENST00000434927 SEPT8Q92599 483 aa10.72□□□□□ -0.69
RBM39-214ENST00000434927 APBB2Q92870 758 aa10.72□□□□□ -0.69
RBM39-214ENST00000434927 GPRASP2Q96D09 838 aa10.72□□□□□ -0.69
RBM39-214ENST00000434927 CDHR1Q96JP9 859 aa10.72□□□□□ -0.69
RBM39-214ENST00000434927 SAMD11Q96NU1 681 aa10.72□□□□□ -0.69
RBM39-214ENST00000434927 NECAB3Q96P71 396 aaPredicted RBP10.72□□□□□ -0.69
RBM39-214ENST00000434927 C1QTNF1Q9BXJ1 281 aa10.72□□□□□ -0.69
RBM39-214ENST00000434927 NRCAMQ92823 1304 aa10.72□□□□□ -0.69
RBM39-214ENST00000434927 PRC1O43663 620 aa10.71□□□□□ -0.69
RBM39-214ENST00000434927 CALM1P0DP23 149 aa10.71□□□□□ -0.69
RBM39-214ENST00000434927 CALM2P0DP24 149 aa10.71□□□□□ -0.69
RBM39-214ENST00000434927 CALM3P0DP25 149 aa10.71□□□□□ -0.69
RBM39-214ENST00000434927 COL9A1P20849 921 aa10.71□□□□□ -0.69
RBM39-214ENST00000434927 TAF2Q6P1X5 1199 aa10.71□□□□□ -0.69
RBM39-214ENST00000434927 MYOCDQ8IZQ8 938 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms