RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 ECEL1O95672 775 aa13.48□□□□□ -0.25
SEMA3F-206ENST00000434342 CACNB1Q02641 598 aaPredicted RBP13.48□□□□□ -0.25
SEMA3F-206ENST00000434342 THEMIS2Q5TEJ8 643 aa13.48□□□□□ -0.25
SEMA3F-206ENST00000434342 RRAGAQ7L523 313 aa13.48□□□□□ -0.25
SEMA3F-206ENST00000434342 DDX12PQ92771 950 aa13.48□□□□□ -0.25
SEMA3F-206ENST00000434342 RAB34Q9BZG1 259 aa13.48□□□□□ -0.25
SEMA3F-206ENST00000434342 KANSL2Q9H9L4 492 aa13.48□□□□□ -0.25
SEMA3F-206ENST00000434342 A0A1B0GUL6 1792 aa13.48□□□□□ -0.25
SEMA3F-206ENST00000434342 ATP2C2O75185 946 aa13.47□□□□□ -0.25
SEMA3F-206ENST00000434342 KIF4AO95239 1232 aa13.47□□□□□ -0.25
SEMA3F-206ENST00000434342 PREPLQ4J6C6 727 aaPredicted RBP13.47□□□□□ -0.25
SEMA3F-206ENST00000434342 MSANTD4Q8NCY6 345 aa13.47□□□□□ -0.25
SEMA3F-206ENST00000434342 PNMA5Q96PV4 448 aa13.47□□□□□ -0.25
SEMA3F-206ENST00000434342 NDST4Q9H3R1 872 aa13.47□□□□□ -0.25
SEMA3F-206ENST00000434342 IL1R1P14778 569 aa13.47□□□□□ -0.25
SEMA3F-206ENST00000434342 MATR3P43243 847 aaKnown RBP eCLIP13.47□□□□□ -0.25
SEMA3F-206ENST00000434342 MRPS25P82663 173 aaKnown RBP13.47□□□□□ -0.25
SEMA3F-206ENST00000434342 USP4Q13107 963 aa13.47□□□□□ -0.25
SEMA3F-206ENST00000434342 GSPT2Q8IYD1 628 aaKnown RBP13.47□□□□□ -0.25
SEMA3F-206ENST00000434342 RIOX1Q9H6W3 641 aa13.47□□□□□ -0.25
SEMA3F-206ENST00000434342 DDX4Q9NQI0 724 aaKnown RBP13.47□□□□□ -0.25
SEMA3F-206ENST00000434342 USP40Q9NVE5 1235 aa13.47□□□□□ -0.25
SEMA3F-206ENST00000434342 AHDC1Q5TGY3 1603 aaPredicted RBP13.47□□□□□ -0.25
SEMA3F-206ENST00000434342 FAM196BA6NMK8 535 aa13.47□□□□□ -0.25
SEMA3F-206ENST00000434342 UPP2O95045 317 aa13.47□□□□□ -0.25
SEMA3F-206ENST00000434342 GYS1P13807 737 aa13.47□□□□□ -0.25
SEMA3F-206ENST00000434342 NT5C2P49902 561 aa13.47□□□□□ -0.25
SEMA3F-206ENST00000434342 SCN7AQ01118 1682 aa13.47□□□□□ -0.25
SEMA3F-206ENST00000434342 CRYMQ14894 314 aa13.47□□□□□ -0.25
SEMA3F-206ENST00000434342 TRAPPC11Q7Z392 1133 aa13.47□□□□□ -0.25
SEMA3F-206ENST00000434342 CACNA2D4Q7Z3S7 1137 aa13.47□□□□□ -0.25
SEMA3F-206ENST00000434342 ADGRF4Q8IZF3 695 aa13.47□□□□□ -0.25
SEMA3F-206ENST00000434342 EP400Q96L91 3159 aa13.47□□□□□ -0.25
SEMA3F-206ENST00000434342 ZCWPW1Q9H0M4 648 aa13.47□□□□□ -0.25
SEMA3F-206ENST00000434342 NLRC4Q9NPP4 1024 aa13.47□□□□□ -0.25
SEMA3F-206ENST00000434342 DDX20Q9UHI6 824 aaKnown RBP13.47□□□□□ -0.25
SEMA3F-206ENST00000434342 RAB21Q9UL25 225 aa13.47□□□□□ -0.25
SEMA3F-206ENST00000434342 SNED1Q8TER0 1413 aa13.46□□□□□ -0.25
SEMA3F-206ENST00000434342 PSMD14O00487 310 aa13.46□□□□□ -0.25
SEMA3F-206ENST00000434342 BBOX1O75936 387 aa13.46□□□□□ -0.25
SEMA3F-206ENST00000434342 DNA2P51530 1060 aa13.46□□□□□ -0.25
SEMA3F-206ENST00000434342 IRAK1P51617 712 aa13.46□□□□□ -0.25
SEMA3F-206ENST00000434342 GNGT1P63211 74 aa13.46□□□□□ -0.25
SEMA3F-206ENST00000434342 CCDC181Q5TID7 509 aa13.46□□□□□ -0.25
SEMA3F-206ENST00000434342 NELFCDQ8IXH7 590 aa13.46□□□□□ -0.25
SEMA3F-206ENST00000434342 MTMR9Q96QG7 549 aa13.46□□□□□ -0.25
SEMA3F-206ENST00000434342 IFIH1Q9BYX4 1025 aaKnown RBP13.46□□□□□ -0.25
SEMA3F-206ENST00000434342 ZC3H12CQ9C0D7 883 aaKnown RBP13.46□□□□□ -0.25
SEMA3F-206ENST00000434342 KLC4Q9NSK0 619 aa13.46□□□□□ -0.25
SEMA3F-206ENST00000434342 MYH8P13535 1937 aa13.46□□□□□ -0.25
SEMA3F-206ENST00000434342 USP17L10C9JJH3 530 aa13.46□□□□□ -0.25
SEMA3F-206ENST00000434342 CDR1P51861 262 aa13.46□□□□□ -0.25
SEMA3F-206ENST00000434342 CACNB3P54284 484 aa13.46□□□□□ -0.25
SEMA3F-206ENST00000434342 TCP10Q12799 353 aa13.46□□□□□ -0.25
SEMA3F-206ENST00000434342 RBBP5Q15291 538 aaKnown RBP13.46□□□□□ -0.25
SEMA3F-206ENST00000434342 MEA1Q16626 185 aa13.46□□□□□ -0.25
SEMA3F-206ENST00000434342 VWA3BQ502W6 1294 aa13.46□□□□□ -0.25
SEMA3F-206ENST00000434342 RETREG2Q8NC44 543 aa13.46□□□□□ -0.25
SEMA3F-206ENST00000434342 CRACR2AQ9BSW2 395 aa13.46□□□□□ -0.25
SEMA3F-206ENST00000434342 TTYH3Q9C0H2 523 aa13.46□□□□□ -0.25
SEMA3F-206ENST00000434342 SERPINB13Q9UIV8 391 aa13.46□□□□□ -0.25
SEMA3F-206ENST00000434342 USP17L15C9J2P7 530 aa13.46□□□□□ -0.26
SEMA3F-206ENST00000434342 USP17L13C9JLJ4 530 aa13.46□□□□□ -0.26
SEMA3F-206ENST00000434342 USP17L11C9JVI0 530 aa13.46□□□□□ -0.26
SEMA3F-206ENST00000434342 USP17L18D6R9N7 530 aa13.46□□□□□ -0.26
SEMA3F-206ENST00000434342 USP17L22D6RA61 530 aa13.46□□□□□ -0.26
SEMA3F-206ENST00000434342 USP17L17D6RBQ6 530 aa13.46□□□□□ -0.26
SEMA3F-206ENST00000434342 USP17L19D6RCP7 530 aa13.46□□□□□ -0.26
SEMA3F-206ENST00000434342 USP17L20D6RJB6 530 aa13.46□□□□□ -0.26
SEMA3F-206ENST00000434342 TRAF5O00463 557 aa13.46□□□□□ -0.26
SEMA3F-206ENST00000434342 NDUFAB1O14561 156 aa13.46□□□□□ -0.26
SEMA3F-206ENST00000434342 ZEB2O60315 1214 aa13.46□□□□□ -0.26
SEMA3F-206ENST00000434342 USP17L24Q0WX57 530 aa13.46□□□□□ -0.26
SEMA3F-206ENST00000434342 USP17L6PQ6QN14 398 aa13.46□□□□□ -0.26
SEMA3F-206ENST00000434342 UNC13DQ70J99 1090 aa13.46□□□□□ -0.26
SEMA3F-206ENST00000434342 YIPF3Q9GZM5 350 aa13.46□□□□□ -0.26
SEMA3F-206ENST00000434342 JMJD4Q9H9V9 463 aa13.46□□□□□ -0.26
SEMA3F-206ENST00000434342 MLXIPQ9HAP2 919 aa13.46□□□□□ -0.26
SEMA3F-206ENST00000434342 DDX25Q9UHL0 483 aaKnown RBP13.46□□□□□ -0.26
SEMA3F-206ENST00000434342 TTLL1O95922 423 aa13.45□□□□□ -0.26
SEMA3F-206ENST00000434342 CXCR5P32302 372 aa13.45□□□□□ -0.26
SEMA3F-206ENST00000434342 EIF4A3P38919 411 aaKnown RBP13.45□□□□□ -0.26
SEMA3F-206ENST00000434342 GRIK3Q13003 919 aa13.45□□□□□ -0.26
SEMA3F-206ENST00000434342 TDRD12Q587J7 1177 aaKnown RBP13.45□□□□□ -0.26
SEMA3F-206ENST00000434342 MEX3CQ5U5Q3 659 aaKnown RBP13.45□□□□□ -0.26
SEMA3F-206ENST00000434342 CENPPQ6IPU0 288 aa13.45□□□□□ -0.26
SEMA3F-206ENST00000434342 TRIM74Q86UV6 250 aa13.45□□□□□ -0.26
SEMA3F-206ENST00000434342 TRIM73Q86UV7 250 aa13.45□□□□□ -0.26
SEMA3F-206ENST00000434342 EHBP1Q8NDI1 1231 aa13.45□□□□□ -0.26
SEMA3F-206ENST00000434342 HNRNPLLQ8WVV9 542 aaKnown RBP13.45□□□□□ -0.26
SEMA3F-206ENST00000434342 TBC1D31Q96DN5 1066 aa13.45□□□□□ -0.26
SEMA3F-206ENST00000434342 GBP3Q9H0R5 595 aa13.45□□□□□ -0.26
SEMA3F-206ENST00000434342 PCDHA12Q9UN75 941 aa13.45□□□□□ -0.26
SEMA3F-206ENST00000434342 ZNF263O14978 683 aa13.45□□□□□ -0.26
SEMA3F-206ENST00000434342 ARID5AQ03989 594 aa13.45□□□□□ -0.26
SEMA3F-206ENST00000434342 ECM1Q16610 540 aa13.45□□□□□ -0.26
SEMA3F-206ENST00000434342 CCDC40Q4G0X9 1142 aa13.45□□□□□ -0.26
SEMA3F-206ENST00000434342 ASPRV1Q53RT3 343 aa13.45□□□□□ -0.26
SEMA3F-206ENST00000434342 PSTPIP2Q9H939 334 aa13.45□□□□□ -0.26
SEMA3F-206ENST00000434342 USO1O60763 962 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms