RNA–Protein interactions for RNA: ENST00000433118.5

SMPD4-206, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 3,335 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-206ENST00000433118 SPICE1Q8N0Z3 855 aa11.66□□□□□ -0.54
SMPD4-206ENST00000433118 IQCDQ96DY2 449 aa11.66□□□□□ -0.54
SMPD4-206ENST00000433118 TANGO6Q9C0B7 1094 aa11.66□□□□□ -0.54
SMPD4-206ENST00000433118 LRRC53A6NM62 1247 aa11.66□□□□□ -0.54
SMPD4-206ENST00000433118 SLC20A2Q08357 652 aa11.66□□□□□ -0.54
SMPD4-206ENST00000433118 CALCRLQ16602 461 aa11.66□□□□□ -0.54
SMPD4-206ENST00000433118 CREG2Q8IUH2 290 aa11.66□□□□□ -0.54
SMPD4-206ENST00000433118 LARP4BQ92615 738 aaKnown RBP11.66□□□□□ -0.54
SMPD4-206ENST00000433118 MYMKA6NI61 221 aa11.66□□□□□ -0.54
SMPD4-206ENST00000433118 USP17L10C9JJH3 530 aa11.66□□□□□ -0.54
SMPD4-206ENST00000433118 EEF2P13639 858 aaKnown RBP11.66□□□□□ -0.54
SMPD4-206ENST00000433118 NAP1L1P55209 391 aaKnown RBP11.66□□□□□ -0.54
SMPD4-206ENST00000433118 IKQ13123 557 aaPredicted RBP11.66□□□□□ -0.54
SMPD4-206ENST00000433118 MAN2A1Q16706 1144 aa11.66□□□□□ -0.54
SMPD4-206ENST00000433118 UBE2SQ16763 222 aa11.66□□□□□ -0.54
SMPD4-206ENST00000433118 TMEM266Q2M3C6 531 aa11.66□□□□□ -0.54
SMPD4-206ENST00000433118 NFRKBQ6P4R8 1299 aa11.66□□□□□ -0.54
SMPD4-206ENST00000433118 SND1Q7KZF4 910 aaKnown RBP eCLIP11.66□□□□□ -0.54
SMPD4-206ENST00000433118 CACNA2D4Q7Z3S7 1137 aa11.66□□□□□ -0.54
SMPD4-206ENST00000433118 CCDC84Q86UT8 332 aaPredicted RBP11.66□□□□□ -0.54
SMPD4-206ENST00000433118 ANKRD13CQ8N6S4 541 aa11.66□□□□□ -0.54
SMPD4-206ENST00000433118 LRRC1Q9BTT6 524 aa11.66□□□□□ -0.54
SMPD4-206ENST00000433118 FAM184BQ9ULE4 1060 aa11.66□□□□□ -0.54
SMPD4-206ENST00000433118 FGFR1OPO95684 399 aaKnown RBP11.65□□□□□ -0.54
SMPD4-206ENST00000433118 JAG1P78504 1218 aa11.65□□□□□ -0.54
SMPD4-206ENST00000433118 GRB10Q13322 594 aa11.65□□□□□ -0.54
SMPD4-206ENST00000433118 RBM26Q5T8P6 1007 aaKnown RBP11.65□□□□□ -0.54
SMPD4-206ENST00000433118 UNC13DQ70J99 1090 aa11.65□□□□□ -0.54
SMPD4-206ENST00000433118 HDAC7Q8WUI4 952 aa11.65□□□□□ -0.54
SMPD4-206ENST00000433118 CSRNP1Q96S65 589 aa11.65□□□□□ -0.54
SMPD4-206ENST00000433118 SIK3Q9Y2K2 1263 aa11.65□□□□□ -0.54
SMPD4-206ENST00000433118 TNS1Q9HBL0 1735 aaKnown RBP11.65□□□□□ -0.54
SMPD4-206ENST00000433118 NRXN2Q9P2S2 1712 aa11.65□□□□□ -0.54
SMPD4-206ENST00000433118 SHTN1A0MZ66 631 aa11.65□□□□□ -0.54
SMPD4-206ENST00000433118 POTEMA6NI47 508 aa11.65□□□□□ -0.54
SMPD4-206ENST00000433118 VGLL3A8MV65 326 aa11.65□□□□□ -0.54
SMPD4-206ENST00000433118 HNRNPH3P31942 346 aaKnown RBP11.65□□□□□ -0.54
SMPD4-206ENST00000433118 MAGEA1P43355 309 aa11.65□□□□□ -0.54
SMPD4-206ENST00000433118 SLC7A5Q01650 507 aa11.65□□□□□ -0.54
SMPD4-206ENST00000433118 TDRD12Q587J7 1177 aaKnown RBP11.65□□□□□ -0.54
SMPD4-206ENST00000433118 MIGA2Q7L4E1 593 aa11.65□□□□□ -0.54
SMPD4-206ENST00000433118 ADGRF4Q8IZF3 695 aa11.65□□□□□ -0.54
SMPD4-206ENST00000433118 SPATA4Q8NEY3 305 aa11.65□□□□□ -0.54
SMPD4-206ENST00000433118 GJA10Q969M2 543 aa11.65□□□□□ -0.54
SMPD4-206ENST00000433118 OSBPL9Q96SU4 736 aa11.65□□□□□ -0.54
SMPD4-206ENST00000433118 BLOC1S4Q9NUP1 217 aa11.65□□□□□ -0.54
SMPD4-206ENST00000433118 PI4KBQ9UBF8 816 aa11.65□□□□□ -0.54
SMPD4-206ENST00000433118 ZC3H4Q9UPT8 1303 aaKnown RBP11.65□□□□□ -0.54
SMPD4-206ENST00000433118 GOLGA6CA6NDK9 693 aa11.65□□□□□ -0.55
SMPD4-206ENST00000433118 GOLGA6DP0CG33 693 aa11.65□□□□□ -0.55
SMPD4-206ENST00000433118 FAM76AQ8TAV0 307 aa11.65□□□□□ -0.55
SMPD4-206ENST00000433118 GOLGA6AQ9NYA3 693 aa11.65□□□□□ -0.55
SMPD4-206ENST00000433118 SMARCAL1Q9NZC9 954 aa11.65□□□□□ -0.55
SMPD4-206ENST00000433118 STK17AQ9UEE5 414 aa11.65□□□□□ -0.55
SMPD4-206ENST00000433118 DMGDHQ9UI17 866 aaKnown RBP11.65□□□□□ -0.55
SMPD4-206ENST00000433118 HYOU1Q9Y4L1 999 aa11.65□□□□□ -0.55
SMPD4-206ENST00000433118 GH2P01242 217 aa11.64□□□□□ -0.55
SMPD4-206ENST00000433118 TCP1P17987 556 aaKnown RBP11.64□□□□□ -0.55
SMPD4-206ENST00000433118 LRRC41Q15345 812 aa11.64□□□□□ -0.55
SMPD4-206ENST00000433118 ZYXQ15942 572 aaKnown RBP11.64□□□□□ -0.55
SMPD4-206ENST00000433118 COBLL1Q53SF7 1204 aa11.64□□□□□ -0.55
SMPD4-206ENST00000433118 MMGT1Q8N4V1 131 aa11.64□□□□□ -0.55
SMPD4-206ENST00000433118 SNX29Q8TEQ0 813 aa11.64□□□□□ -0.55
SMPD4-206ENST00000433118 RAB34Q9BZG1 259 aa11.64□□□□□ -0.55
SMPD4-206ENST00000433118 EHD2Q9NZN4 543 aa11.64□□□□□ -0.55
SMPD4-206ENST00000433118 SWAP70Q9UH65 585 aa11.64□□□□□ -0.55
SMPD4-206ENST00000433118 PVALEFA0A1B0GWK0 134 aa11.64□□□□□ -0.55
SMPD4-206ENST00000433118 AGPSO00116 658 aa11.64□□□□□ -0.55
SMPD4-206ENST00000433118 NCK2O43639 380 aa11.64□□□□□ -0.55
SMPD4-206ENST00000433118 TDP2O95551 362 aa11.64□□□□□ -0.55
SMPD4-206ENST00000433118 KCNA3P22001 575 aa11.64□□□□□ -0.55
SMPD4-206ENST00000433118 SLC1A4P43007 532 aa11.64□□□□□ -0.55
SMPD4-206ENST00000433118 PAFAH1B1P43034 410 aa11.64□□□□□ -0.55
SMPD4-206ENST00000433118 TNNI2P48788 182 aa11.64□□□□□ -0.55
SMPD4-206ENST00000433118 GFPT1Q06210 699 aaPredicted RBP11.64□□□□□ -0.55
SMPD4-206ENST00000433118 RRP1BQ14684 758 aaKnown RBP11.64□□□□□ -0.55
SMPD4-206ENST00000433118 GUF1Q8N442 669 aaKnown RBP11.64□□□□□ -0.55
SMPD4-206ENST00000433118 AENQ8WTP8 325 aaKnown RBP11.64□□□□□ -0.55
SMPD4-206ENST00000433118 PNMA5Q96PV4 448 aa11.64□□□□□ -0.55
SMPD4-206ENST00000433118 TSG101Q99816 390 aa11.64□□□□□ -0.55
SMPD4-206ENST00000433118 JMJD4Q9H9V9 463 aa11.64□□□□□ -0.55
SMPD4-206ENST00000433118 ANKRD65E5RJM6 399 aa11.63□□□□□ -0.55
SMPD4-206ENST00000433118 BUB1O43683 1085 aa11.63□□□□□ -0.55
SMPD4-206ENST00000433118 SLC37A4O43826 429 aa11.63□□□□□ -0.55
SMPD4-206ENST00000433118 RASSF7Q02833 373 aa11.63□□□□□ -0.55
SMPD4-206ENST00000433118 ICA1Q05084 483 aa11.63□□□□□ -0.55
SMPD4-206ENST00000433118 LRRC63Q05C16 580 aa11.63□□□□□ -0.55
SMPD4-206ENST00000433118 ZNF543Q08ER8 600 aa11.63□□□□□ -0.55
SMPD4-206ENST00000433118 KRT79Q5XKE5 535 aa11.63□□□□□ -0.55
SMPD4-206ENST00000433118 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.63□□□□□ -0.55
SMPD4-206ENST00000433118 CCDC155Q8N6L0 562 aa11.63□□□□□ -0.55
SMPD4-206ENST00000433118 PPP1R11O60927 126 aaPredicted RBP11.63□□□□□ -0.55
SMPD4-206ENST00000433118 PPFIA4O75335 1185 aa11.63□□□□□ -0.55
SMPD4-206ENST00000433118 DDX12PQ92771 950 aa11.63□□□□□ -0.55
SMPD4-206ENST00000433118 NLRC4Q9NPP4 1024 aa11.63□□□□□ -0.55
SMPD4-206ENST00000433118 SERPINA10Q9UK55 444 aa11.63□□□□□ -0.55
SMPD4-206ENST00000433118 IGKV6D-41A0A0C4DH26 115 aa11.63□□□□□ -0.55
SMPD4-206ENST00000433118 PRLRP16471 622 aa11.63□□□□□ -0.55
SMPD4-206ENST00000433118 DNA2P51530 1060 aa11.63□□□□□ -0.55
SMPD4-206ENST00000433118 ADCY7P51828 1080 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms