RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 PTGS1P23219 599 aa9.22□□□□□ -0.93
ECHDC1-207ENST00000430841 HNRNPUQ00839 825 aaKnown RBP eCLIP9.22□□□□□ -0.93
ECHDC1-207ENST00000430841 BAATQ14032 418 aaPredicted RBP9.22□□□□□ -0.93
ECHDC1-207ENST00000430841 SYDE2Q5VT97 1194 aa9.22□□□□□ -0.93
ECHDC1-207ENST00000430841 DHX37Q8IY37 1157 aaKnown RBP9.22□□□□□ -0.93
ECHDC1-207ENST00000430841 KBTBD3Q8NAB2 608 aa9.22□□□□□ -0.93
ECHDC1-207ENST00000430841 DCAF4Q8WV16 495 aa9.22□□□□□ -0.93
ECHDC1-207ENST00000430841 SAMD11Q96NU1 681 aa9.22□□□□□ -0.93
ECHDC1-207ENST00000430841 INSL6Q9Y581 213 aa9.22□□□□□ -0.93
ECHDC1-207ENST00000430841 EMSYQ7Z589 1322 aa9.22□□□□□ -0.93
ECHDC1-207ENST00000430841 BRWD1Q9NSI6 2320 aa9.22□□□□□ -0.93
ECHDC1-207ENST00000430841 SIP14410 1827 aa9.21□□□□□ -0.93
ECHDC1-207ENST00000430841 XIRP2A4UGR9 3374 aa9.21□□□□□ -0.93
ECHDC1-207ENST00000430841 PATL2C9JE40 543 aaKnown RBP9.21□□□□□ -0.94
ECHDC1-207ENST00000430841 GH1P01241 217 aa9.21□□□□□ -0.94
ECHDC1-207ENST00000430841 PPARAQ07869 468 aa9.21□□□□□ -0.94
ECHDC1-207ENST00000430841 CHST3Q7LGC8 479 aa9.21□□□□□ -0.94
ECHDC1-207ENST00000430841 FAM178BQ8IXR5 827 aa9.21□□□□□ -0.94
ECHDC1-207ENST00000430841 MYOCDQ8IZQ8 938 aa9.21□□□□□ -0.94
ECHDC1-207ENST00000430841 DNERQ8NFT8 737 aa9.21□□□□□ -0.94
ECHDC1-207ENST00000430841 YME1L1Q96TA2 773 aa9.21□□□□□ -0.94
ECHDC1-207ENST00000430841 FSD1Q9BTV5 496 aa9.21□□□□□ -0.94
ECHDC1-207ENST00000430841 DDX49Q9Y6V7 483 aaKnown RBP9.21□□□□□ -0.94
ECHDC1-207ENST00000430841 REV3LO60673 3130 aa9.21□□□□□ -0.94
ECHDC1-207ENST00000430841 SCN10AQ9Y5Y9 1956 aa9.21□□□□□ -0.94
ECHDC1-207ENST00000430841 LCHNA4D1U4 455 aa9.2□□□□□ -0.94
ECHDC1-207ENST00000430841 NFIBO00712 420 aa9.2□□□□□ -0.94
ECHDC1-207ENST00000430841 TERTO14746 1132 aaKnown RBP9.2□□□□□ -0.94
ECHDC1-207ENST00000430841 DHX16O60231 1041 aaKnown RBP9.2□□□□□ -0.94
ECHDC1-207ENST00000430841 GJB5O95377 273 aa9.2□□□□□ -0.94
ECHDC1-207ENST00000430841 CFHP08603 1231 aa9.2□□□□□ -0.94
ECHDC1-207ENST00000430841 IL9P15248 144 aa9.2□□□□□ -0.94
ECHDC1-207ENST00000430841 ERVK-21P61565 698 aa9.2□□□□□ -0.94
ECHDC1-207ENST00000430841 DEFB103AP81534 67 aa9.2□□□□□ -0.94
ECHDC1-207ENST00000430841 NHLH1Q02575 133 aa9.2□□□□□ -0.94
ECHDC1-207ENST00000430841 DGKDQ16760 1214 aa9.2□□□□□ -0.94
ECHDC1-207ENST00000430841 RRP12Q5JTH9 1297 aaKnown RBP9.2□□□□□ -0.94
ECHDC1-207ENST00000430841 SLC30A10Q6XR72 485 aa9.2□□□□□ -0.94
ECHDC1-207ENST00000430841 SUGP1Q8IWZ8 645 aaKnown RBP9.2□□□□□ -0.94
ECHDC1-207ENST00000430841 SCUBE3Q8IX30 993 aa9.2□□□□□ -0.94
ECHDC1-207ENST00000430841 IFNL3Q8IZI9 196 aa9.2□□□□□ -0.94
ECHDC1-207ENST00000430841 MORC4Q8TE76 937 aa9.2□□□□□ -0.94
ECHDC1-207ENST00000430841 PPP1R13LQ8WUF5 828 aa9.2□□□□□ -0.94
ECHDC1-207ENST00000430841 PPP2R3CQ969Q6 453 aa9.2□□□□□ -0.94
ECHDC1-207ENST00000430841 MRPL38Q96DV4 380 aaKnown RBP9.2□□□□□ -0.94
ECHDC1-207ENST00000430841 EPB41L4AQ9HCS5 686 aaPredicted RBP9.2□□□□□ -0.94
ECHDC1-207ENST00000430841 GPCPD1Q9NPB8 672 aa9.2□□□□□ -0.94
ECHDC1-207ENST00000430841 C11orf16Q9NQ32 467 aa9.2□□□□□ -0.94
ECHDC1-207ENST00000430841 PRKAG3Q9UGI9 489 aa9.2□□□□□ -0.94
ECHDC1-207ENST00000430841 LINC01553A4QN01 128 aa9.19□□□□□ -0.94
ECHDC1-207ENST00000430841 H3BQ06 376 aaPredicted RBP9.19□□□□□ -0.94
ECHDC1-207ENST00000430841 NCK2O43639 380 aa9.19□□□□□ -0.94
ECHDC1-207ENST00000430841 CHGBP05060 677 aa9.19□□□□□ -0.94
ECHDC1-207ENST00000430841 PDIA4P13667 645 aaKnown RBP9.19□□□□□ -0.94
ECHDC1-207ENST00000430841 SLC16A2P36021 539 aa9.19□□□□□ -0.94
ECHDC1-207ENST00000430841 USH1GQ495M9 461 aa9.19□□□□□ -0.94
ECHDC1-207ENST00000430841 SEPT14Q6ZU15 432 aa9.19□□□□□ -0.94
ECHDC1-207ENST00000430841 TMCO2Q7Z6W1 182 aaPredicted RBP9.19□□□□□ -0.94
ECHDC1-207ENST00000430841 BANK1Q8NDB2 785 aa9.19□□□□□ -0.94
ECHDC1-207ENST00000430841 AFG1LQ8WV93 481 aa9.19□□□□□ -0.94
ECHDC1-207ENST00000430841 OSBP2Q969R2 916 aa9.19□□□□□ -0.94
ECHDC1-207ENST00000430841 ALG1Q9BT22 464 aa9.19□□□□□ -0.94
ECHDC1-207ENST00000430841 RANBP17Q9H2T7 1088 aaKnown RBP9.19□□□□□ -0.94
ECHDC1-207ENST00000430841 SUGCTQ9HAC7 445 aa9.19□□□□□ -0.94
ECHDC1-207ENST00000430841 CLDND1Q9NY35 253 aa9.19□□□□□ -0.94
ECHDC1-207ENST00000430841 FRMPD2Q68DX3 1309 aaPredicted RBP9.19□□□□□ -0.94
ECHDC1-207ENST00000430841 RBM47A0AV96 593 aaKnown RBP9.18□□□□□ -0.94
ECHDC1-207ENST00000430841 M0R2C6 588 aa9.18□□□□□ -0.94
ECHDC1-207ENST00000430841 TRAK2O60296 914 aa9.18□□□□□ -0.94
ECHDC1-207ENST00000430841 LPXNO60711 386 aa9.18□□□□□ -0.94
ECHDC1-207ENST00000430841 LGR5O75473 907 aa9.18□□□□□ -0.94
ECHDC1-207ENST00000430841 ARHGEF15O94989 841 aa9.18□□□□□ -0.94
ECHDC1-207ENST00000430841 MMP3P08254 477 aa9.18□□□□□ -0.94
ECHDC1-207ENST00000430841 TOP1P11387 765 aaKnown RBP9.18□□□□□ -0.94
ECHDC1-207ENST00000430841 CKBP12277 381 aa9.18□□□□□ -0.94
ECHDC1-207ENST00000430841 RPS6P62753 249 aaKnown RBP9.18□□□□□ -0.94
ECHDC1-207ENST00000430841 PTK7Q13308 1070 aa9.18□□□□□ -0.94
ECHDC1-207ENST00000430841 GPM6BQ13491 265 aa9.18□□□□□ -0.94
ECHDC1-207ENST00000430841 TRIP12Q14669 1992 aaPredicted RBP9.18□□□□□ -0.94
ECHDC1-207ENST00000430841 TMEM63BQ5T3F8 832 aa9.18□□□□□ -0.94
ECHDC1-207ENST00000430841 GDF6Q6KF10 455 aaPredicted RBP9.18□□□□□ -0.94
ECHDC1-207ENST00000430841 COPS5Q92905 334 aa9.18□□□□□ -0.94
ECHDC1-207ENST00000430841 SNX27Q96L92 541 aa9.18□□□□□ -0.94
ECHDC1-207ENST00000430841 FBXL18Q96ME1 805 aa9.18□□□□□ -0.94
ECHDC1-207ENST00000430841 PURBQ96QR8 312 aaKnown RBP9.18□□□□□ -0.94
ECHDC1-207ENST00000430841 PRRX2Q99811 253 aa9.18□□□□□ -0.94
ECHDC1-207ENST00000430841 NSUN3Q9H649 340 aaKnown RBP9.18□□□□□ -0.94
ECHDC1-207ENST00000430841 ADGRG1Q9Y653 693 aa9.18□□□□□ -0.94
ECHDC1-207ENST00000430841 MRVI1Q9Y6F6 885 aa9.18□□□□□ -0.94
ECHDC1-207ENST00000430841 LCTP09848 1927 aa9.17□□□□□ -0.94
ECHDC1-207ENST00000430841 CCDC171Q6TFL3 1326 aa9.17□□□□□ -0.94
ECHDC1-207ENST00000430841 WDR19Q8NEZ3 1342 aa9.17□□□□□ -0.94
ECHDC1-207ENST00000430841 SMARCA5O60264 1052 aaPredicted RBP9.17□□□□□ -0.94
ECHDC1-207ENST00000430841 UPP2O95045 317 aa9.17□□□□□ -0.94
ECHDC1-207ENST00000430841 CTNNB1P35222 781 aa9.17□□□□□ -0.94
ECHDC1-207ENST00000430841 THPOP40225 353 aa9.17□□□□□ -0.94
ECHDC1-207ENST00000430841 MCM6Q14566 821 aa9.17□□□□□ -0.94
ECHDC1-207ENST00000430841 STXBP2Q15833 593 aa9.17□□□□□ -0.94
ECHDC1-207ENST00000430841 PKN1Q16512 942 aa9.17□□□□□ -0.94
ECHDC1-207ENST00000430841 CTC1Q2NKJ3 1217 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms