RNA–Protein interactions for RNA: ENST00000430548.5

AC004540.1-202, humanhuman

TSL 4

Gene AC004540.1, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-202ENST00000430548 COL9A1P20849 921 aa21.55■■□□□ 1.04
AC004540.1-202ENST00000430548 SART3Q15020 963 aaKnown RBP21.55■■□□□ 1.04
AC004540.1-202ENST00000430548 GNPTABQ3T906 1256 aa21.55■■□□□ 1.04
AC004540.1-202ENST00000430548 METTL7BQ6UX53 244 aa21.55■■□□□ 1.04
AC004540.1-202ENST00000430548 FCHSD1Q86WN1 690 aa21.55■■□□□ 1.04
AC004540.1-202ENST00000430548 MAP3K14Q99558 947 aa21.55■■□□□ 1.04
AC004540.1-202ENST00000430548 ZBED2Q9BTP6 218 aa21.55■■□□□ 1.04
AC004540.1-202ENST00000430548 SPZ1Q9BXG8 430 aa21.55■■□□□ 1.04
AC004540.1-202ENST00000430548 MLXIPQ9HAP2 919 aa21.55■■□□□ 1.04
AC004540.1-202ENST00000430548 C17orf102A2RUQ5 167 aa21.54■■□□□ 1.04
AC004540.1-202ENST00000430548 H3BRB1 525 aa21.54■■□□□ 1.04
AC004540.1-202ENST00000430548 CAND2O75155 1236 aa21.54■■□□□ 1.04
AC004540.1-202ENST00000430548 PLEKHG4Q58EX7 1191 aa21.54■■□□□ 1.04
AC004540.1-202ENST00000430548 SP7Q8TDD2 431 aaPredicted RBP21.54■■□□□ 1.04
AC004540.1-202ENST00000430548 IGDCC4Q8TDY8 1250 aa21.54■■□□□ 1.04
AC004540.1-202ENST00000430548 ZFP91Q96JP5 570 aaPredicted RBP21.54■■□□□ 1.04
AC004540.1-202ENST00000430548 TGS1Q96RS0 853 aaKnown RBP21.54■■□□□ 1.04
AC004540.1-202ENST00000430548 TUT1Q9H6E5 874 aaKnown RBP21.54■■□□□ 1.04
AC004540.1-202ENST00000430548 BCAS3Q9H6U6 928 aa21.54■■□□□ 1.04
AC004540.1-202ENST00000430548 RSPH10B2B2RC85 870 aa21.53■■□□□ 1.04
AC004540.1-202ENST00000430548 SPATA31C2B4DYI2 1134 aa21.53■■□□□ 1.04
AC004540.1-202ENST00000430548 RBAK-RBAKDNI3L0D1 243 aa21.53■■□□□ 1.04
AC004540.1-202ENST00000430548 FIBPO43427 364 aa21.53■■□□□ 1.04
AC004540.1-202ENST00000430548 RSPH10BP0C881 870 aa21.53■■□□□ 1.04
AC004540.1-202ENST00000430548 SMIM10L2AP0DMW4 78 aa21.53■■□□□ 1.04
AC004540.1-202ENST00000430548 SMIM10L2BP0DMW5 78 aa21.53■■□□□ 1.04
AC004540.1-202ENST00000430548 HTRA4P83105 476 aaPredicted RBP21.53■■□□□ 1.04
AC004540.1-202ENST00000430548 HLA-CQ95604 372 aa21.53■■□□□ 1.04
AC004540.1-202ENST00000430548 SUGCTQ9HAC7 445 aa21.53■■□□□ 1.04
AC004540.1-202ENST00000430548 PIK3CDO00329 1044 aa21.52■■□□□ 1.04
AC004540.1-202ENST00000430548 DDAH1O94760 285 aa21.52■■□□□ 1.04
AC004540.1-202ENST00000430548 THPOP40225 353 aa21.52■■□□□ 1.04
AC004540.1-202ENST00000430548 NEDD9Q14511 834 aa21.52■■□□□ 1.04
AC004540.1-202ENST00000430548 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.52■■□□□ 1.04
AC004540.1-202ENST00000430548 CATIPQ7Z7H3 387 aa21.52■■□□□ 1.04
AC004540.1-202ENST00000430548 DBF4BQ8NFT6 615 aa21.52■■□□□ 1.04
AC004540.1-202ENST00000430548 MAP4K1Q92918 833 aa21.52■■□□□ 1.04
AC004540.1-202ENST00000430548 ATP6V0A1Q93050 837 aa21.52■■□□□ 1.04
AC004540.1-202ENST00000430548 GPR20Q99678 358 aa21.52■■□□□ 1.04
AC004540.1-202ENST00000430548 MTA3Q9BTC8 594 aa21.52■■□□□ 1.04
AC004540.1-202ENST00000430548 USP26Q9BXU7 913 aa21.52■■□□□ 1.04
AC004540.1-202ENST00000430548 LY9Q9HBG7 655 aa21.52■■□□□ 1.04
AC004540.1-202ENST00000430548 TREHO43280 583 aa21.51■■□□□ 1.03
AC004540.1-202ENST00000430548 SMARCA1P28370 1054 aa21.51■■□□□ 1.03
AC004540.1-202ENST00000430548 ADAM17P78536 824 aa21.51■■□□□ 1.03
AC004540.1-202ENST00000430548 PCNX4Q63HM2 1172 aa21.51■■□□□ 1.03
AC004540.1-202ENST00000430548 ZNF654Q8IZM8 581 aa21.51■■□□□ 1.03
AC004540.1-202ENST00000430548 RNPEPQ9H4A4 650 aa21.51■■□□□ 1.03
AC004540.1-202ENST00000430548 INSL6Q9Y581 213 aa21.51■■□□□ 1.03
AC004540.1-202ENST00000430548 LOXHD1Q8IVV2 1947 aa21.51■■□□□ 1.03
AC004540.1-202ENST00000430548 KIAA1671Q9BY89 1806 aa21.5■■□□□ 1.03
AC004540.1-202ENST00000430548 NOP56O00567 594 aaKnown RBP21.5■■□□□ 1.03
AC004540.1-202ENST00000430548 MEIS2O14770 477 aa21.5■■□□□ 1.03
AC004540.1-202ENST00000430548 AMHP03971 560 aa21.5■■□□□ 1.03
AC004540.1-202ENST00000430548 XRRA1Q6P2D8 792 aa21.5■■□□□ 1.03
AC004540.1-202ENST00000430548 SENP7Q9BQF6 1050 aa21.5■■□□□ 1.03
AC004540.1-202ENST00000430548 MTUS1Q9ULD2 1270 aa21.5■■□□□ 1.03
AC004540.1-202ENST00000430548 CYFIP1Q7L576 1253 aa21.49■■□□□ 1.03
AC004540.1-202ENST00000430548 TRIM50Q86XT4 487 aa21.49■■□□□ 1.03
AC004540.1-202ENST00000430548 ZNF215Q9UL58 517 aaPredicted RBP21.49■■□□□ 1.03
AC004540.1-202ENST00000430548 RBM8AQ9Y5S9 174 aaKnown RBP21.49■■□□□ 1.03
AC004540.1-202ENST00000430548 KIF5BP33176 963 aa21.48■■□□□ 1.03
AC004540.1-202ENST00000430548 FAM117BQ6P1L5 589 aa21.48■■□□□ 1.03
AC004540.1-202ENST00000430548 USP17L6PQ6QN14 398 aa21.48■■□□□ 1.03
AC004540.1-202ENST00000430548 MYOCDQ8IZQ8 938 aa21.48■■□□□ 1.03
AC004540.1-202ENST00000430548 CTCFLQ8NI51 663 aaPredicted RBP21.48■■□□□ 1.03
AC004540.1-202ENST00000430548 LMBR1Q8WVP7 490 aa21.48■■□□□ 1.03
AC004540.1-202ENST00000430548 RRP36Q96EU6 259 aaKnown RBP21.48■■□□□ 1.03
AC004540.1-202ENST00000430548 C17orf80Q9BSJ5 609 aa21.48■■□□□ 1.03
AC004540.1-202ENST00000430548 MYL10Q9BUA6 226 aa21.48■■□□□ 1.03
AC004540.1-202ENST00000430548 OSBPL7Q9BZF2 842 aa21.48■■□□□ 1.03
AC004540.1-202ENST00000430548 TELO2Q9Y4R8 837 aa21.48■■□□□ 1.03
AC004540.1-202ENST00000430548 GNAT1P11488 350 aa21.47■■□□□ 1.03
AC004540.1-202ENST00000430548 FAM26DQ5JW98 314 aa21.47■■□□□ 1.03
AC004540.1-202ENST00000430548 SMARCC2Q8TAQ2 1214 aa21.47■■□□□ 1.03
AC004540.1-202ENST00000430548 SEPT8Q92599 483 aa21.47■■□□□ 1.03
AC004540.1-202ENST00000430548 C1QTNF1Q9BXJ1 281 aa21.47■■□□□ 1.03
AC004540.1-202ENST00000430548 RTEL1Q9NZ71 1219 aa21.47■■□□□ 1.03
AC004540.1-202ENST00000430548 TTC3P53804 2025 aa21.46■■□□□ 1.03
AC004540.1-202ENST00000430548 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.46■■□□□ 1.03
AC004540.1-202ENST00000430548 SH2B2O14492 632 aaPredicted RBP21.46■■□□□ 1.03
AC004540.1-202ENST00000430548 PLEKHA8P1O95397 391 aa21.46■■□□□ 1.03
AC004540.1-202ENST00000430548 CTSHP09668 335 aa21.46■■□□□ 1.03
AC004540.1-202ENST00000430548 FBXO22Q8NEZ5 403 aa21.46■■□□□ 1.03
AC004540.1-202ENST00000430548 PIBF1Q8WXW3 757 aa21.46■■□□□ 1.03
AC004540.1-202ENST00000430548 CUL5Q93034 780 aa21.46■■□□□ 1.03
AC004540.1-202ENST00000430548 TOP1MTQ969P6 601 aa21.46■■□□□ 1.03
AC004540.1-202ENST00000430548 GPRASP2Q96D09 838 aa21.46■■□□□ 1.03
AC004540.1-202ENST00000430548 SAMD11Q96NU1 681 aa21.46■■□□□ 1.03
AC004540.1-202ENST00000430548 LZTS2Q9BRK4 669 aa21.46■■□□□ 1.03
AC004540.1-202ENST00000430548 UBE2ZQ9H832 354 aaPredicted RBP21.46■■□□□ 1.03
AC004540.1-202ENST00000430548 SETD4Q9NVD3 440 aa21.46■■□□□ 1.03
AC004540.1-202ENST00000430548 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.45■■□□□ 1.02
AC004540.1-202ENST00000430548 KCNA2P16389 499 aa21.45■■□□□ 1.02
AC004540.1-202ENST00000430548 COL9A3Q14050 684 aaPredicted RBP21.45■■□□□ 1.02
AC004540.1-202ENST00000430548 RPAINQ86UA6 219 aa21.45■■□□□ 1.02
AC004540.1-202ENST00000430548 SRBD1Q8N5C6 995 aaKnown RBP21.45■■□□□ 1.02
AC004540.1-202ENST00000430548 GIMAP8Q8ND71 665 aaPredicted RBP21.45■■□□□ 1.02
AC004540.1-202ENST00000430548 APBB2Q92870 758 aa21.45■■□□□ 1.02
AC004540.1-202ENST00000430548 SEC63Q9UGP8 760 aaKnown RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms