RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 HOXD8P13378 290 aaPredicted RBP14.14□□□□□ -0.15
USP40-205ENST00000430158 SOX10P56693 466 aa14.14□□□□□ -0.15
USP40-205ENST00000430158 GNPTABQ3T906 1256 aa14.14□□□□□ -0.15
USP40-205ENST00000430158 Q4G0T1 1027 aa14.14□□□□□ -0.15
USP40-205ENST00000430158 CELF3Q5SZQ8 465 aaKnown RBP14.14□□□□□ -0.15
USP40-205ENST00000430158 LARP1BQ659C4 914 aaKnown RBP14.14□□□□□ -0.15
USP40-205ENST00000430158 TLK2Q86UE8 772 aa14.14□□□□□ -0.15
USP40-205ENST00000430158 NLRX1Q86UT6 975 aa14.14□□□□□ -0.15
USP40-205ENST00000430158 ANKLE1Q8NAG6 615 aa14.14□□□□□ -0.15
USP40-205ENST00000430158 DIS3LQ8TF46 1054 aaKnown RBP14.14□□□□□ -0.15
USP40-205ENST00000430158 AGO4Q9HCK5 861 aaKnown RBP14.14□□□□□ -0.15
USP40-205ENST00000430158 KIF3AQ9Y496 699 aa14.14□□□□□ -0.15
USP40-205ENST00000430158 MRVI1Q9Y6F6 885 aa14.14□□□□□ -0.15
USP40-205ENST00000430158 TDP2O95551 362 aa14.13□□□□□ -0.15
USP40-205ENST00000430158 TFRCP02786 760 aaKnown RBP14.13□□□□□ -0.15
USP40-205ENST00000430158 SYT1P21579 422 aa14.13□□□□□ -0.15
USP40-205ENST00000430158 TOB1P50616 345 aaPredicted RBP14.13□□□□□ -0.15
USP40-205ENST00000430158 ITGB3BPQ13352 177 aaPredicted RBP14.13□□□□□ -0.15
USP40-205ENST00000430158 MTMR1Q13613 665 aa14.13□□□□□ -0.15
USP40-205ENST00000430158 PPP4R3AQ6IN85 833 aa14.13□□□□□ -0.15
USP40-205ENST00000430158 NEK8Q86SG6 692 aa14.13□□□□□ -0.15
USP40-205ENST00000430158 NOSTRINQ8IVI9 506 aa14.13□□□□□ -0.15
USP40-205ENST00000430158 BRMS1Q9HCU9 246 aa14.13□□□□□ -0.15
USP40-205ENST00000430158 PHF24Q9UPV7 400 aa14.13□□□□□ -0.15
USP40-205ENST00000430158 ALPK3Q96L96 1907 aa14.13□□□□□ -0.15
USP40-205ENST00000430158 DNM1LO00429 736 aa14.12□□□□□ -0.15
USP40-205ENST00000430158 MSH4O15457 936 aa14.12□□□□□ -0.15
USP40-205ENST00000430158 SLC37A4O43826 429 aa14.12□□□□□ -0.15
USP40-205ENST00000430158 FARP2O94887 1054 aaPredicted RBP14.12□□□□□ -0.15
USP40-205ENST00000430158 GGPS1O95749 300 aa14.12□□□□□ -0.15
USP40-205ENST00000430158 GH1P01241 217 aa14.12□□□□□ -0.15
USP40-205ENST00000430158 RGS19P49795 217 aa14.12□□□□□ -0.15
USP40-205ENST00000430158 BEX3Q00994 111 aa14.12□□□□□ -0.15
USP40-205ENST00000430158 SAFBQ15424 915 aaKnown RBP eCLIP14.12□□□□□ -0.15
USP40-205ENST00000430158 FSCN1Q16658 493 aaKnown RBP14.12□□□□□ -0.15
USP40-205ENST00000430158 IER5LQ5T953 404 aa14.12□□□□□ -0.15
USP40-205ENST00000430158 PLA2G4DQ86XP0 818 aa14.12□□□□□ -0.15
USP40-205ENST00000430158 ARRDC4Q8NCT1 418 aa14.12□□□□□ -0.15
USP40-205ENST00000430158 ETNPPLQ8TBG4 499 aa14.12□□□□□ -0.15
USP40-205ENST00000430158 CDHR1Q96JP9 859 aa14.12□□□□□ -0.15
USP40-205ENST00000430158 TSEN34Q9BSV6 310 aaKnown RBP14.12□□□□□ -0.15
USP40-205ENST00000430158 MTMR6Q9Y217 621 aa14.12□□□□□ -0.15
USP40-205ENST00000430158 NFASCO94856 1347 aa14.12□□□□□ -0.15
USP40-205ENST00000430158 LAMC2Q13753 1193 aa14.11□□□□□ -0.15
USP40-205ENST00000430158 NEDD9Q14511 834 aa14.11□□□□□ -0.15
USP40-205ENST00000430158 KCNA10Q16322 511 aa14.11□□□□□ -0.15
USP40-205ENST00000430158 HSDL1Q3SXM5 330 aa14.11□□□□□ -0.15
USP40-205ENST00000430158 PRR16Q569H4 304 aa14.11□□□□□ -0.15
USP40-205ENST00000430158 METTL7BQ6UX53 244 aa14.11□□□□□ -0.15
USP40-205ENST00000430158 B3GNT9Q6UX72 402 aa14.11□□□□□ -0.15
USP40-205ENST00000430158 OR6J1Q8NGC5 347 aa14.11□□□□□ -0.15
USP40-205ENST00000430158 PPTC7Q8NI37 304 aa14.11□□□□□ -0.15
USP40-205ENST00000430158 AFG1LQ8WV93 481 aa14.11□□□□□ -0.15
USP40-205ENST00000430158 HAS1Q92839 578 aa14.11□□□□□ -0.15
USP40-205ENST00000430158 SLC5A5Q92911 643 aa14.11□□□□□ -0.15
USP40-205ENST00000430158 AP5M1Q9H0R1 490 aa14.11□□□□□ -0.15
USP40-205ENST00000430158 KCNMB3Q9NPA1 279 aa14.11□□□□□ -0.15
USP40-205ENST00000430158 MMP3P08254 477 aa14.1□□□□□ -0.15
USP40-205ENST00000430158 C6orf222P0C671 652 aaPredicted RBP14.1□□□□□ -0.15
USP40-205ENST00000430158 GCFC2P16383 781 aaKnown RBP14.1□□□□□ -0.15
USP40-205ENST00000430158 PDCP20941 246 aa14.1□□□□□ -0.15
USP40-205ENST00000430158 ZNF76P36508 570 aa14.1□□□□□ -0.15
USP40-205ENST00000430158 ACLYP53396 1101 aa14.1□□□□□ -0.15
USP40-205ENST00000430158 SETQ01105 290 aaPredicted RBP14.1□□□□□ -0.15
USP40-205ENST00000430158 LETM2Q2VYF4 491 aa14.1□□□□□ -0.15
USP40-205ENST00000430158 GNASQ5JWF2 1037 aa14.1□□□□□ -0.15
USP40-205ENST00000430158 CYFIP1Q7L576 1253 aa14.1□□□□□ -0.15
USP40-205ENST00000430158 RNF180Q86T96 592 aa14.1□□□□□ -0.15
USP40-205ENST00000430158 DHX37Q8IY37 1157 aaKnown RBP14.1□□□□□ -0.15
USP40-205ENST00000430158 C4orf32Q8N8J7 132 aa14.1□□□□□ -0.15
USP40-205ENST00000430158 PAWRQ96IZ0 340 aaKnown RBP14.1□□□□□ -0.15
USP40-205ENST00000430158 GPR20Q99678 358 aa14.1□□□□□ -0.15
USP40-205ENST00000430158 TRIP12Q14669 1992 aaPredicted RBP14.1□□□□□ -0.15
USP40-205ENST00000430158 MYH9P35579 1960 aaKnown RBP14.09□□□□□ -0.15
USP40-205ENST00000430158 GSTTP1A0A1W2PQM5 241 aa14.09□□□□□ -0.15
USP40-205ENST00000430158 IPO5O00410 1097 aaKnown RBP14.09□□□□□ -0.15
USP40-205ENST00000430158 ATG7O95352 703 aa14.09□□□□□ -0.15
USP40-205ENST00000430158 CCNE2O96020 404 aa14.09□□□□□ -0.15
USP40-205ENST00000430158 ASGR1P07306 291 aa14.09□□□□□ -0.15
USP40-205ENST00000430158 TRAPPC10P48553 1259 aa14.09□□□□□ -0.15
USP40-205ENST00000430158 PURAQ00577 322 aaKnown RBP14.09□□□□□ -0.15
USP40-205ENST00000430158 RESTQ13127 1097 aa14.09□□□□□ -0.15
USP40-205ENST00000430158 GIMAP8Q8ND71 665 aaPredicted RBP14.09□□□□□ -0.15
USP40-205ENST00000430158 KAT2BQ92831 832 aa14.09□□□□□ -0.15
USP40-205ENST00000430158 GJA10Q969M2 543 aa14.09□□□□□ -0.15
USP40-205ENST00000430158 MTMR9Q96QG7 549 aa14.09□□□□□ -0.15
USP40-205ENST00000430158 UIMC1Q96RL1 719 aa14.09□□□□□ -0.15
USP40-205ENST00000430158 DDX25Q9UHL0 483 aaKnown RBP14.09□□□□□ -0.15
USP40-205ENST00000430158 GRIN2DO15399 1336 aa14.09□□□□□ -0.15
USP40-205ENST00000430158 MOXD2PA6NHM9 499 aa14.08□□□□□ -0.16
USP40-205ENST00000430158 H3BQV1 296 aa14.08□□□□□ -0.16
USP40-205ENST00000430158 STX6O43752 255 aa14.08□□□□□ -0.16
USP40-205ENST00000430158 SORBS3O60504 671 aa14.08□□□□□ -0.16
USP40-205ENST00000430158 PPFIA4O75335 1185 aa14.08□□□□□ -0.16
USP40-205ENST00000430158 PSMD10O75832 226 aa14.08□□□□□ -0.16
USP40-205ENST00000430158 DDIT3P35638 169 aa14.08□□□□□ -0.16
USP40-205ENST00000430158 CPT1AP50416 773 aa14.08□□□□□ -0.16
USP40-205ENST00000430158 SNX17Q15036 470 aa14.08□□□□□ -0.16
USP40-205ENST00000430158 IFFO2Q5TF58 517 aa14.08□□□□□ -0.16
USP40-205ENST00000430158 PCSK9Q8NBP7 692 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms