RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 SLC9A2Q9UBY0 812 aa14.22□□□□□ -0.13
PTCH1-207ENST00000429896 COL22A1Q8NFW1 1626 aaPredicted RBP14.22□□□□□ -0.13
PTCH1-207ENST00000429896 NFKBIEO00221 500 aa14.22□□□□□ -0.13
PTCH1-207ENST00000429896 MYZAPP0CAP1 466 aa14.22□□□□□ -0.13
PTCH1-207ENST00000429896 DEFB115Q30KQ5 88 aa14.22□□□□□ -0.13
PTCH1-207ENST00000429896 PPP1R9AQ9ULJ8 1098 aa14.22□□□□□ -0.13
PTCH1-207ENST00000429896 IPO5O00410 1097 aaKnown RBP14.22□□□□□ -0.13
PTCH1-207ENST00000429896 PLA2G4BP0C869 781 aa14.22□□□□□ -0.13
PTCH1-207ENST00000429896 PROCA1Q8NCQ7 364 aaPredicted RBP14.22□□□□□ -0.13
PTCH1-207ENST00000429896 PPP1R16BQ96T49 567 aa14.22□□□□□ -0.13
PTCH1-207ENST00000429896 APOL6Q9BWW8 343 aa14.22□□□□□ -0.13
PTCH1-207ENST00000429896 SENP2Q9HC62 589 aa14.22□□□□□ -0.13
PTCH1-207ENST00000429896 GUCY1A2P33402 732 aa14.22□□□□□ -0.13
PTCH1-207ENST00000429896 CYLC1P35663 651 aaPredicted RBP14.22□□□□□ -0.13
PTCH1-207ENST00000429896 PAFAH1B1P43034 410 aa14.22□□□□□ -0.13
PTCH1-207ENST00000429896 NBPF11Q86T75 865 aa14.22□□□□□ -0.13
PTCH1-207ENST00000429896 ATP6V0A4Q9HBG4 840 aa14.22□□□□□ -0.13
PTCH1-207ENST00000429896 DISC1Q9NRI5 854 aa14.22□□□□□ -0.13
PTCH1-207ENST00000429896 FBXO28Q9NVF7 368 aa14.22□□□□□ -0.13
PTCH1-207ENST00000429896 PABPN1LA6NDY0 278 aaKnown RBP14.22□□□□□ -0.13
PTCH1-207ENST00000429896 NR3C2P08235 984 aa14.22□□□□□ -0.13
PTCH1-207ENST00000429896 ACCSQ96QU6 501 aa14.22□□□□□ -0.13
PTCH1-207ENST00000429896 SLC39A2Q9NP94 309 aa14.22□□□□□ -0.13
PTCH1-207ENST00000429896 HNRNPDLO14979 420 aaKnown RBP14.21□□□□□ -0.13
PTCH1-207ENST00000429896 SWSAP1Q6NVH7 229 aa14.21□□□□□ -0.13
PTCH1-207ENST00000429896 RGMBQ6NW40 437 aa14.21□□□□□ -0.13
PTCH1-207ENST00000429896 GH1P01241 217 aa14.21□□□□□ -0.13
PTCH1-207ENST00000429896 ERCC3P19447 782 aa14.21□□□□□ -0.13
PTCH1-207ENST00000429896 IFI16Q16666 785 aaKnown RBP14.21□□□□□ -0.13
PTCH1-207ENST00000429896 CEP55Q53EZ4 464 aa14.21□□□□□ -0.13
PTCH1-207ENST00000429896 POTEDQ86YR6 584 aa14.21□□□□□ -0.13
PTCH1-207ENST00000429896 LMBRD1Q9NUN5 540 aa14.21□□□□□ -0.13
PTCH1-207ENST00000429896 PARP2Q9UGN5 583 aa14.21□□□□□ -0.13
PTCH1-207ENST00000429896 PPP1R14CQ8TAE6 165 aa14.21□□□□□ -0.13
PTCH1-207ENST00000429896 KLRG2A4D1S0 409 aaPredicted RBP14.21□□□□□ -0.14
PTCH1-207ENST00000429896 PTPRAP18433 802 aa14.21□□□□□ -0.14
PTCH1-207ENST00000429896 INHBEP58166 350 aa14.21□□□□□ -0.14
PTCH1-207ENST00000429896 GABBR1Q9UBS5 961 aa14.21□□□□□ -0.14
PTCH1-207ENST00000429896 TMEM88BA6NKF7 163 aa14.2□□□□□ -0.14
PTCH1-207ENST00000429896 STXBP3O00186 592 aa14.2□□□□□ -0.14
PTCH1-207ENST00000429896 GTF2F1P35269 517 aaKnown RBP eCLIP14.2□□□□□ -0.14
PTCH1-207ENST00000429896 CACNB1Q02641 598 aaPredicted RBP14.2□□□□□ -0.14
PTCH1-207ENST00000429896 KIF18AQ8NI77 898 aa14.2□□□□□ -0.14
PTCH1-207ENST00000429896 FTOQ9C0B1 505 aaKnown RBP eCLIP14.2□□□□□ -0.14
PTCH1-207ENST00000429896 JPH1Q9HDC5 661 aaPredicted RBP14.2□□□□□ -0.14
PTCH1-207ENST00000429896 P4HBP07237 508 aaKnown RBP14.2□□□□□ -0.14
PTCH1-207ENST00000429896 RARBP10826 455 aa14.2□□□□□ -0.14
PTCH1-207ENST00000429896 PLCG1P19174 1290 aa14.2□□□□□ -0.14
PTCH1-207ENST00000429896 MCM6Q14566 821 aa14.2□□□□□ -0.14
PTCH1-207ENST00000429896 POMGNT1Q8WZA1 660 aa14.2□□□□□ -0.14
PTCH1-207ENST00000429896 DYDC2Q96IM9 177 aa14.2□□□□□ -0.14
PTCH1-207ENST00000429896 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.2□□□□□ -0.14
PTCH1-207ENST00000429896 TBC1D12O60347 775 aa14.2□□□□□ -0.14
PTCH1-207ENST00000429896 SESTD1Q86VW0 696 aa14.2□□□□□ -0.14
PTCH1-207ENST00000429896 VPS16Q9H269 839 aa14.2□□□□□ -0.14
PTCH1-207ENST00000429896 DYNC1LI2O43237 492 aaPredicted RBP14.2□□□□□ -0.14
PTCH1-207ENST00000429896 CDC25AP30304 524 aa14.2□□□□□ -0.14
PTCH1-207ENST00000429896 DSG3P32926 999 aa14.2□□□□□ -0.14
PTCH1-207ENST00000429896 YWHAEP62258 255 aaKnown RBP14.2□□□□□ -0.14
PTCH1-207ENST00000429896 TRIML1Q8N9V2 468 aa14.2□□□□□ -0.14
PTCH1-207ENST00000429896 IFNKQ9P0W0 207 aa14.2□□□□□ -0.14
PTCH1-207ENST00000429896 SMIM23A6NLE4 172 aa14.2□□□□□ -0.14
PTCH1-207ENST00000429896 XPOTO43592 962 aaKnown RBP14.2□□□□□ -0.14
PTCH1-207ENST00000429896 TDP2O95551 362 aa14.2□□□□□ -0.14
PTCH1-207ENST00000429896 PHF20Q9BVI0 1012 aa14.2□□□□□ -0.14
PTCH1-207ENST00000429896 CNTNAP5Q8WYK1 1306 aa14.2□□□□□ -0.14
PTCH1-207ENST00000429896 GLI3P10071 1580 aa14.2□□□□□ -0.14
PTCH1-207ENST00000429896 CCDC155Q8N6L0 562 aa14.19□□□□□ -0.14
PTCH1-207ENST00000429896 TAF6LQ9Y6J9 622 aa14.19□□□□□ -0.14
PTCH1-207ENST00000429896 PSMC5P62195 406 aa14.19□□□□□ -0.14
PTCH1-207ENST00000429896 HERVK_113P62684 666 aa14.19□□□□□ -0.14
PTCH1-207ENST00000429896 PPARDQ03181 441 aa14.19□□□□□ -0.14
PTCH1-207ENST00000429896 XRRA1Q6P2D8 792 aa14.19□□□□□ -0.14
PTCH1-207ENST00000429896 IPO4Q8TEX9 1081 aaKnown RBP14.19□□□□□ -0.14
PTCH1-207ENST00000429896 RCOR1Q9UKL0 485 aa14.19□□□□□ -0.14
PTCH1-207ENST00000429896 RGPD1P0DJD0 1748 aa14.19□□□□□ -0.14
PTCH1-207ENST00000429896 CRYBG1Q9Y4K1 1723 aa14.19□□□□□ -0.14
PTCH1-207ENST00000429896 POTEMA6NI47 508 aa14.19□□□□□ -0.14
PTCH1-207ENST00000429896 MYL1P05976 194 aa14.19□□□□□ -0.14
PTCH1-207ENST00000429896 SRGAP2CP0DJJ0 459 aa14.19□□□□□ -0.14
PTCH1-207ENST00000429896 TMEM206Q9H813 350 aa14.19□□□□□ -0.14
PTCH1-207ENST00000429896 KIAA1468Q9P260 1216 aa14.19□□□□□ -0.14
PTCH1-207ENST00000429896 QARSP47897 775 aaKnown RBP14.19□□□□□ -0.14
PTCH1-207ENST00000429896 NLRP4Q96MN2 994 aa14.19□□□□□ -0.14
PTCH1-207ENST00000429896 PARVGQ9HBI0 331 aa14.19□□□□□ -0.14
PTCH1-207ENST00000429896 GGPS1O95749 300 aa14.19□□□□□ -0.14
PTCH1-207ENST00000429896 KATNAL1Q9BW62 490 aa14.19□□□□□ -0.14
PTCH1-207ENST00000429896 BHMT2Q9H2M3 363 aa14.19□□□□□ -0.14
PTCH1-207ENST00000429896 LTBP3Q9NS15 1303 aa14.19□□□□□ -0.14
PTCH1-207ENST00000429896 A0A1W2PRG0 241 aa14.19□□□□□ -0.14
PTCH1-207ENST00000429896 C6orf222P0C671 652 aaPredicted RBP14.19□□□□□ -0.14
PTCH1-207ENST00000429896 TMEM191BP0C7N4 346 aa14.19□□□□□ -0.14
PTCH1-207ENST00000429896 PKNOX2Q96KN3 472 aa14.19□□□□□ -0.14
PTCH1-207ENST00000429896 LUC7L2Q9Y383 392 aaKnown RBP14.19□□□□□ -0.14
PTCH1-207ENST00000429896 PCDHA10Q9Y5I2 948 aa14.19□□□□□ -0.14
PTCH1-207ENST00000429896 TLR3O15455 904 aaKnown RBP14.18□□□□□ -0.14
PTCH1-207ENST00000429896 GPATCH11Q8N954 259 aa14.18□□□□□ -0.14
PTCH1-207ENST00000429896 MAP3K20Q9NYL2 800 aaKnown RBP14.18□□□□□ -0.14
PTCH1-207ENST00000429896 FAM184BQ9ULE4 1060 aa14.18□□□□□ -0.14
PTCH1-207ENST00000429896 PITPNM2Q9BZ72 1349 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms