RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 GREB1LQ9C091 1923 aaPredicted RBP14.71□□□□□ -0.05
SNRNP200-202ENST00000429650 USP17L10C9JJH3 530 aa14.71□□□□□ -0.06
SNRNP200-202ENST00000429650 RBAK-RBAKDNI3L0D1 243 aa14.71□□□□□ -0.06
SNRNP200-202ENST00000429650 NOL4O94818 638 aa14.71□□□□□ -0.06
SNRNP200-202ENST00000429650 SSBP05455 408 aaKnown RBP eCLIP14.71□□□□□ -0.06
SNRNP200-202ENST00000429650 SLC1A4P43007 532 aa14.71□□□□□ -0.06
SNRNP200-202ENST00000429650 RASSF7Q02833 373 aa14.71□□□□□ -0.06
SNRNP200-202ENST00000429650 GPATCH4Q5T3I0 446 aaKnown RBP14.71□□□□□ -0.06
SNRNP200-202ENST00000429650 ANKRD13CQ8N6S4 541 aa14.71□□□□□ -0.06
SNRNP200-202ENST00000429650 HDAC7Q8WUI4 952 aa14.71□□□□□ -0.06
SNRNP200-202ENST00000429650 RIN2Q8WYP3 895 aaPredicted RBP14.71□□□□□ -0.06
SNRNP200-202ENST00000429650 RUBCNQ92622 972 aa14.71□□□□□ -0.06
SNRNP200-202ENST00000429650 MTMR8Q96EF0 704 aa14.71□□□□□ -0.06
SNRNP200-202ENST00000429650 CRACR2AQ9BSW2 395 aa14.71□□□□□ -0.06
SNRNP200-202ENST00000429650 NT5C3AQ9H0P0 336 aa14.71□□□□□ -0.06
SNRNP200-202ENST00000429650 PSTPIP2Q9H939 334 aa14.71□□□□□ -0.06
SNRNP200-202ENST00000429650 NLRC4Q9NPP4 1024 aa14.71□□□□□ -0.06
SNRNP200-202ENST00000429650 FAM184BQ9ULE4 1060 aa14.71□□□□□ -0.06
SNRNP200-202ENST00000429650 ATF5Q9Y2D1 282 aaPredicted RBP14.71□□□□□ -0.06
SNRNP200-202ENST00000429650 LRRC37AA6NMS7 1700 aa14.7□□□□□ -0.06
SNRNP200-202ENST00000429650 E9PMD0 336 aa14.7□□□□□ -0.06
SNRNP200-202ENST00000429650 AGPSO00116 658 aa14.7□□□□□ -0.06
SNRNP200-202ENST00000429650 CXCR5P32302 372 aa14.7□□□□□ -0.06
SNRNP200-202ENST00000429650 GGCXP38435 758 aa14.7□□□□□ -0.06
SNRNP200-202ENST00000429650 IRX3P78415 501 aaPredicted RBP14.7□□□□□ -0.06
SNRNP200-202ENST00000429650 TDRD12Q587J7 1177 aaKnown RBP14.7□□□□□ -0.06
SNRNP200-202ENST00000429650 KCTD1Q719H9 257 aa14.7□□□□□ -0.06
SNRNP200-202ENST00000429650 CERS5Q8N5B7 392 aa14.7□□□□□ -0.06
SNRNP200-202ENST00000429650 AFAP1L1Q8TED9 768 aa14.7□□□□□ -0.06
SNRNP200-202ENST00000429650 CEP63Q96MT8 703 aa14.7□□□□□ -0.06
SNRNP200-202ENST00000429650 PSMB7Q99436 277 aa14.7□□□□□ -0.06
SNRNP200-202ENST00000429650 HINFPQ9BQA5 517 aa14.7□□□□□ -0.06
SNRNP200-202ENST00000429650 BMP2KQ9NSY1 1161 aaPredicted RBP14.7□□□□□ -0.06
SNRNP200-202ENST00000429650 TBC1D7Q9P0N9 293 aa14.7□□□□□ -0.06
SNRNP200-202ENST00000429650 DMGDHQ9UI17 866 aaKnown RBP14.7□□□□□ -0.06
SNRNP200-202ENST00000429650 SUGT1Q9Y2Z0 365 aa14.7□□□□□ -0.06
SNRNP200-202ENST00000429650 PCDHA2Q9Y5H9 948 aa14.7□□□□□ -0.06
SNRNP200-202ENST00000429650 RIMBP2O15034 1052 aa14.7□□□□□ -0.06
SNRNP200-202ENST00000429650 NCK2O43639 380 aa14.7□□□□□ -0.06
SNRNP200-202ENST00000429650 TLR2O60603 784 aa14.7□□□□□ -0.06
SNRNP200-202ENST00000429650 QSER1Q2KHR3 1735 aa14.7□□□□□ -0.06
SNRNP200-202ENST00000429650 FAM83BQ5T0W9 1011 aa14.7□□□□□ -0.06
SNRNP200-202ENST00000429650 SYN2Q92777 582 aaPredicted RBP14.7□□□□□ -0.06
SNRNP200-202ENST00000429650 NOX5Q96PH1 765 aa14.7□□□□□ -0.06
SNRNP200-202ENST00000429650 CRAMP1Q96RY5 1269 aa14.7□□□□□ -0.06
SNRNP200-202ENST00000429650 TLR10Q9BXR5 811 aa14.7□□□□□ -0.06
SNRNP200-202ENST00000429650 NUCKS1Q9H1E3 243 aaKnown RBP14.7□□□□□ -0.06
SNRNP200-202ENST00000429650 SMARCAL1Q9NZC9 954 aa14.7□□□□□ -0.06
SNRNP200-202ENST00000429650 IVLP07476 585 aa14.69□□□□□ -0.06
SNRNP200-202ENST00000429650 SLC9C1Q4G0N8 1177 aa14.69□□□□□ -0.06
SNRNP200-202ENST00000429650 KLHDC7AQ5VTJ3 777 aa14.69□□□□□ -0.06
SNRNP200-202ENST00000429650 SFMBT2Q5VUG0 894 aa14.69□□□□□ -0.06
SNRNP200-202ENST00000429650 TRIM59Q8IWR1 403 aa14.69□□□□□ -0.06
SNRNP200-202ENST00000429650 RNF10Q8N5U6 811 aaKnown RBP14.69□□□□□ -0.06
SNRNP200-202ENST00000429650 GOLGA6L1Q8N7Z2 621 aa14.69□□□□□ -0.06
SNRNP200-202ENST00000429650 LSM14BQ9BX40 385 aaKnown RBP14.69□□□□□ -0.06
SNRNP200-202ENST00000429650 USP40Q9NVE5 1235 aa14.69□□□□□ -0.06
SNRNP200-202ENST00000429650 EHD2Q9NZN4 543 aa14.69□□□□□ -0.06
SNRNP200-202ENST00000429650 USP21Q9UK80 565 aa14.69□□□□□ -0.06
SNRNP200-202ENST00000429650 KIAA1024Q9UPX6 916 aa14.69□□□□□ -0.06
SNRNP200-202ENST00000429650 BUB1O43683 1085 aa14.69□□□□□ -0.06
SNRNP200-202ENST00000429650 SERPING1P05155 500 aa14.69□□□□□ -0.06
SNRNP200-202ENST00000429650 PLA2G4BP0C869 781 aa14.69□□□□□ -0.06
SNRNP200-202ENST00000429650 MARSP56192 900 aaKnown RBP14.69□□□□□ -0.06
SNRNP200-202ENST00000429650 CCDC181Q5TID7 509 aa14.69□□□□□ -0.06
SNRNP200-202ENST00000429650 NELFCDQ8IXH7 590 aa14.69□□□□□ -0.06
SNRNP200-202ENST00000429650 CCDC65Q8IXS2 484 aa14.69□□□□□ -0.06
SNRNP200-202ENST00000429650 UIMC1Q96RL1 719 aa14.69□□□□□ -0.06
SNRNP200-202ENST00000429650 NAP1L4Q99733 375 aaKnown RBP14.69□□□□□ -0.06
SNRNP200-202ENST00000429650 COA1Q9GZY4 146 aa14.69□□□□□ -0.06
SNRNP200-202ENST00000429650 ATAD5Q96QE3 1844 aa14.69□□□□□ -0.06
SNRNP200-202ENST00000429650 NPHP3-ACAD11A0A0J9YXS1 232 aa14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 POTEB3A0JP26 581 aa14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 POTECB2RU33 542 aa14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 MPHOSPH10O00566 681 aaKnown RBP14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 GNA14O95837 355 aa14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 MATR3P43243 847 aaKnown RBP eCLIP14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 POLR2FP61218 127 aaKnown RBP14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 POTEBQ6S5H4 581 aa14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 ADAMTSL1Q8N6G6 1762 aa14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 USP17L15C9J2P7 530 aa14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 USP17L13C9JLJ4 530 aa14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 USP17L11C9JVI0 530 aa14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 USP17L18D6R9N7 530 aa14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 USP17L22D6RA61 530 aa14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 USP17L17D6RBQ6 530 aa14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 USP17L19D6RCP7 530 aa14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 USP17L20D6RJB6 530 aa14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 TOM1O60784 492 aa14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 CYP11B2P19099 503 aa14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 MRPS25P82663 173 aaKnown RBP14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 SLC7A5Q01650 507 aa14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 CACNB1Q02641 598 aaPredicted RBP14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 DDR1Q08345 913 aa14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 USP17L24Q0WX57 530 aa14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 HAUS3Q68CZ6 603 aa14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 USP17L6PQ6QN14 398 aa14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 LRRC31Q6UY01 552 aa14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 TMC4Q7Z404 712 aa14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 GPBP1Q86WP2 473 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms