RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 TTC22Q5TAA0 569 aa19.17■□□□□ 0.66
VARS-216ENST00000428445 KCNV1Q6PIU1 500 aa19.17■□□□□ 0.66
VARS-216ENST00000428445 SERINC5Q86VE9 423 aa19.17■□□□□ 0.66
VARS-216ENST00000428445 TUT1Q9H6E5 874 aaKnown RBP19.17■□□□□ 0.66
VARS-216ENST00000428445 CD320Q9NPF0 282 aa19.17■□□□□ 0.66
VARS-216ENST00000428445 MAP3K20Q9NYL2 800 aaKnown RBP19.17■□□□□ 0.66
VARS-216ENST00000428445 SUPT16HQ9Y5B9 1047 aaKnown RBP19.17■□□□□ 0.66
VARS-216ENST00000428445 PNMA6FA0A0J9YX94 578 aa19.16■□□□□ 0.66
VARS-216ENST00000428445 E7EWF7 191 aa19.16■□□□□ 0.66
VARS-216ENST00000428445 TROAPQ12815 778 aa19.16■□□□□ 0.66
VARS-216ENST00000428445 CYFIP1Q7L576 1253 aa19.16■□□□□ 0.66
VARS-216ENST00000428445 TRIM50Q86XT4 487 aa19.16■□□□□ 0.66
VARS-216ENST00000428445 MYL10Q9BUA6 226 aa19.16■□□□□ 0.66
VARS-216ENST00000428445 SETD4Q9NVD3 440 aa19.16■□□□□ 0.66
VARS-216ENST00000428445 UPP2O95045 317 aa19.15■□□□□ 0.66
VARS-216ENST00000428445 TGFB3P10600 412 aa19.15■□□□□ 0.66
VARS-216ENST00000428445 CHMLP26374 656 aa19.15■□□□□ 0.66
VARS-216ENST00000428445 ANTXR2P58335 489 aa19.15■□□□□ 0.66
VARS-216ENST00000428445 SP4Q02446 784 aa19.15■□□□□ 0.66
VARS-216ENST00000428445 MKRN4PQ13434 485 aaPredicted RBP19.15■□□□□ 0.66
VARS-216ENST00000428445 WTAPQ15007 396 aa19.15■□□□□ 0.66
VARS-216ENST00000428445 UTP14CQ5TAP6 766 aaKnown RBP19.15■□□□□ 0.66
VARS-216ENST00000428445 COL9A3Q14050 684 aaPredicted RBP19.14■□□□□ 0.65
VARS-216ENST00000428445 PLEKHG4Q58EX7 1191 aa19.14■□□□□ 0.65
VARS-216ENST00000428445 USP17L6PQ6QN14 398 aa19.14■□□□□ 0.65
VARS-216ENST00000428445 SAMD3Q8N6K7 520 aa19.14■□□□□ 0.65
VARS-216ENST00000428445 INSL6Q9Y581 213 aa19.14■□□□□ 0.65
VARS-216ENST00000428445 U3KPZ7 1027 aaPredicted RBP19.14■□□□□ 0.65
VARS-216ENST00000428445 ERICH2A1L162 156 aa19.13■□□□□ 0.65
VARS-216ENST00000428445 SPATA31C2B4DYI2 1134 aa19.13■□□□□ 0.65
VARS-216ENST00000428445 NOP56O00567 594 aaKnown RBP19.13■□□□□ 0.65
VARS-216ENST00000428445 EFCAB14O75071 495 aa19.13■□□□□ 0.65
VARS-216ENST00000428445 AMHP03971 560 aa19.13■□□□□ 0.65
VARS-216ENST00000428445 HOXC8P31273 242 aa19.13■□□□□ 0.65
VARS-216ENST00000428445 CMTR1Q8N1G2 835 aaKnown RBP19.13■□□□□ 0.65
VARS-216ENST00000428445 FBXO22Q8NEZ5 403 aa19.13■□□□□ 0.65
VARS-216ENST00000428445 IGDCC4Q8TDY8 1250 aa19.13■□□□□ 0.65
VARS-216ENST00000428445 GPR20Q99678 358 aa19.13■□□□□ 0.65
VARS-216ENST00000428445 LRFN3Q9BTN0 628 aa19.13■□□□□ 0.65
VARS-216ENST00000428445 LMCD1Q9NZU5 365 aa19.13■□□□□ 0.65
VARS-216ENST00000428445 EMSYQ7Z589 1322 aa19.12■□□□□ 0.65
VARS-216ENST00000428445 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.12■□□□□ 0.65
VARS-216ENST00000428445 FAM86C2PA6NEL3 165 aa19.12■□□□□ 0.65
VARS-216ENST00000428445 ICAM3P32942 547 aa19.12■□□□□ 0.65
VARS-216ENST00000428445 HTRA4P83105 476 aaPredicted RBP19.12■□□□□ 0.65
VARS-216ENST00000428445 RALYLQ86SE5 291 aaKnown RBP19.12■□□□□ 0.65
VARS-216ENST00000428445 NCOA7Q8NI08 942 aa19.12■□□□□ 0.65
VARS-216ENST00000428445 INPP4AQ96PE3 977 aaPredicted RBP19.12■□□□□ 0.65
VARS-216ENST00000428445 C1QTNF1Q9BXJ1 281 aa19.12■□□□□ 0.65
VARS-216ENST00000428445 UBE2ZQ9H832 354 aaPredicted RBP19.12■□□□□ 0.65
VARS-216ENST00000428445 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.11■□□□□ 0.65
VARS-216ENST00000428445 KCNA5P22460 613 aa19.11■□□□□ 0.65
VARS-216ENST00000428445 IRX6P78412 446 aaPredicted RBP19.11■□□□□ 0.65
VARS-216ENST00000428445 METTL7BQ6UX53 244 aa19.11■□□□□ 0.65
VARS-216ENST00000428445 CATIPQ7Z7H3 387 aa19.11■□□□□ 0.65
VARS-216ENST00000428445 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.11■□□□□ 0.65
VARS-216ENST00000428445 KAT6AQ92794 2004 aa19.11■□□□□ 0.65
VARS-216ENST00000428445 MYO7AQ13402 2215 aa19.1■□□□□ 0.65
VARS-216ENST00000428445 FRMPD4Q14CM0 1322 aa19.1■□□□□ 0.65
VARS-216ENST00000428445 hCG_1642624A0A1W2PR95 340 aa19.1■□□□□ 0.65
VARS-216ENST00000428445 MEIS2O14770 477 aa19.1■□□□□ 0.65
VARS-216ENST00000428445 ATP9AO75110 1047 aa19.1■□□□□ 0.65
VARS-216ENST00000428445 RXRAP19793 462 aa19.1■□□□□ 0.65
VARS-216ENST00000428445 ARHGAP4P98171 946 aa19.1■□□□□ 0.65
VARS-216ENST00000428445 NEDD9Q14511 834 aa19.1■□□□□ 0.65
VARS-216ENST00000428445 GNPTABQ3T906 1256 aa19.1■□□□□ 0.65
VARS-216ENST00000428445 EPC2Q52LR7 807 aa19.1■□□□□ 0.65
VARS-216ENST00000428445 RAB11FIP4Q86YS3 637 aa19.1■□□□□ 0.65
VARS-216ENST00000428445 MB21D2Q8IYB1 491 aaPredicted RBP19.1■□□□□ 0.65
VARS-216ENST00000428445 SMARCC2Q8TAQ2 1214 aa19.1■□□□□ 0.65
VARS-216ENST00000428445 SP7Q8TDD2 431 aaPredicted RBP19.1■□□□□ 0.65
VARS-216ENST00000428445 SEPT8Q92599 483 aa19.1■□□□□ 0.65
VARS-216ENST00000428445 TOP1MTQ969P6 601 aa19.1■□□□□ 0.65
VARS-216ENST00000428445 USP26Q9BXU7 913 aa19.1■□□□□ 0.65
VARS-216ENST00000428445 C11orf16Q9NQ32 467 aa19.1■□□□□ 0.65
VARS-216ENST00000428445 SGSM2O43147 1006 aa19.09■□□□□ 0.65
VARS-216ENST00000428445 FIBPO43427 364 aa19.09■□□□□ 0.65
VARS-216ENST00000428445 PLEKHA8P1O95397 391 aa19.09■□□□□ 0.65
VARS-216ENST00000428445 IL9P15248 144 aa19.09■□□□□ 0.65
VARS-216ENST00000428445 RUFY4Q6ZNE9 571 aa19.09■□□□□ 0.65
VARS-216ENST00000428445 LMBR1Q8WVP7 490 aa19.09■□□□□ 0.65
VARS-216ENST00000428445 RUFY2Q8WXA3 655 aa19.09■□□□□ 0.65
VARS-216ENST00000428445 ZBTB10Q96DT7 871 aa19.09■□□□□ 0.65
VARS-216ENST00000428445 YME1L1Q96TA2 773 aa19.09■□□□□ 0.65
VARS-216ENST00000428445 LY9Q9HBG7 655 aa19.09■□□□□ 0.65
VARS-216ENST00000428445 PKD2L1Q9P0L9 805 aa19.09■□□□□ 0.65
VARS-216ENST00000428445 NLRC5Q86WI3 1866 aa19.08■□□□□ 0.65
VARS-216ENST00000428445 CHRNA1P02708 482 aa19.08■□□□□ 0.64
VARS-216ENST00000428445 PLA2G5P39877 138 aa19.08■□□□□ 0.64
VARS-216ENST00000428445 ADAM17P78536 824 aa19.08■□□□□ 0.64
VARS-216ENST00000428445 TRAF1Q13077 416 aa19.08■□□□□ 0.64
VARS-216ENST00000428445 SART3Q15020 963 aaKnown RBP19.08■□□□□ 0.64
VARS-216ENST00000428445 ZNF654Q8IZM8 581 aa19.08■□□□□ 0.64
VARS-216ENST00000428445 SRBD1Q8N5C6 995 aaKnown RBP19.08■□□□□ 0.64
VARS-216ENST00000428445 RBM8AQ9Y5S9 174 aaKnown RBP19.08■□□□□ 0.64
VARS-216ENST00000428445 H3BQ06 376 aaPredicted RBP19.07■□□□□ 0.64
VARS-216ENST00000428445 MARK3P27448 753 aa19.07■□□□□ 0.64
VARS-216ENST00000428445 GPM6BQ13491 265 aa19.07■□□□□ 0.64
VARS-216ENST00000428445 LEXMQ3ZCV2 418 aa19.07■□□□□ 0.64
VARS-216ENST00000428445 PCNX4Q63HM2 1172 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms