RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 MEIS1O00470 390 aa19.06■□□□□ 0.64
VRK2-204ENST00000428021 MAFGO15525 162 aa19.06■□□□□ 0.64
VRK2-204ENST00000428021 CDKL5O76039 1030 aa19.06■□□□□ 0.64
VRK2-204ENST00000428021 CYP3A4P08684 503 aa19.06■□□□□ 0.64
VRK2-204ENST00000428021 PSEN2P49810 448 aa19.06■□□□□ 0.64
VRK2-204ENST00000428021 PTPN11Q06124 597 aaPredicted RBP19.06■□□□□ 0.64
VRK2-204ENST00000428021 NPY5RQ15761 445 aa19.06■□□□□ 0.64
VRK2-204ENST00000428021 CEP55Q53EZ4 464 aa19.06■□□□□ 0.64
VRK2-204ENST00000428021 FAM47CQ5HY64 1035 aa19.06■□□□□ 0.64
VRK2-204ENST00000428021 MCTP2Q6DN12 878 aa19.06■□□□□ 0.64
VRK2-204ENST00000428021 BICD2Q8TD16 824 aa19.06■□□□□ 0.64
VRK2-204ENST00000428021 GTF3C6Q969F1 213 aa19.06■□□□□ 0.64
VRK2-204ENST00000428021 C16orf70Q9BSU1 422 aa19.06■□□□□ 0.64
VRK2-204ENST00000428021 KCNH7Q9NS40 1196 aa19.06■□□□□ 0.64
VRK2-204ENST00000428021 LAMA2P24043 3122 aaKnown RBP19.05■□□□□ 0.64
VRK2-204ENST00000428021 EDIL3O43854 480 aa19.05■□□□□ 0.64
VRK2-204ENST00000428021 ARP10275 920 aa19.05■□□□□ 0.64
VRK2-204ENST00000428021 FXR1P51114 621 aaKnown RBP eCLIP19.05■□□□□ 0.64
VRK2-204ENST00000428021 EPHB4P54760 987 aa19.05■□□□□ 0.64
VRK2-204ENST00000428021 NLRP5P59047 1200 aa19.05■□□□□ 0.64
VRK2-204ENST00000428021 CHMP4BP1P59074 171 aa19.05■□□□□ 0.64
VRK2-204ENST00000428021 ST3GAL1Q11201 340 aa19.05■□□□□ 0.64
VRK2-204ENST00000428021 SESTD1Q86VW0 696 aa19.05■□□□□ 0.64
VRK2-204ENST00000428021 TDHQ8IZJ6 230 aa19.05■□□□□ 0.64
VRK2-204ENST00000428021 GIMAP8Q8ND71 665 aaPredicted RBP19.05■□□□□ 0.64
VRK2-204ENST00000428021 CTAGE1Q96RT6 745 aa19.05■□□□□ 0.64
VRK2-204ENST00000428021 NOC4LQ9BVI4 516 aaKnown RBP19.05■□□□□ 0.64
VRK2-204ENST00000428021 PKD2L1Q9P0L9 805 aa19.05■□□□□ 0.64
VRK2-204ENST00000428021 UMODL1Q5DID0 1318 aa19.04■□□□□ 0.64
VRK2-204ENST00000428021 FAM86B1E9PN63 330 aa19.04■□□□□ 0.64
VRK2-204ENST00000428021 M0R2N6 131 aa19.04■□□□□ 0.64
VRK2-204ENST00000428021 LGALS2P05162 132 aa19.04■□□□□ 0.64
VRK2-204ENST00000428021 FAM86B2P0C5J1 330 aa19.04■□□□□ 0.64
VRK2-204ENST00000428021 CYP2C9P11712 490 aa19.04■□□□□ 0.64
VRK2-204ENST00000428021 FDPSP14324 419 aaKnown RBP19.04■□□□□ 0.64
VRK2-204ENST00000428021 CYP2C18P33260 490 aa19.04■□□□□ 0.64
VRK2-204ENST00000428021 MFSD10Q14728 455 aa19.04■□□□□ 0.64
VRK2-204ENST00000428021 KIAA0753Q2KHM9 967 aa19.04■□□□□ 0.64
VRK2-204ENST00000428021 MFSD5Q6N075 450 aa19.04■□□□□ 0.64
VRK2-204ENST00000428021 NIPA1Q7RTP0 329 aa19.04■□□□□ 0.64
VRK2-204ENST00000428021 FAM177A1Q8N128 213 aaPredicted RBP19.04■□□□□ 0.64
VRK2-204ENST00000428021 PPP1R12CQ9BZL4 782 aa19.04■□□□□ 0.64
VRK2-204ENST00000428021 HIPK3Q9H422 1215 aa19.04■□□□□ 0.64
VRK2-204ENST00000428021 PCDHA4Q9UN74 947 aa19.04■□□□□ 0.64
VRK2-204ENST00000428021 IGLV3-22A0A075B6J6 115 aa19.03■□□□□ 0.64
VRK2-204ENST00000428021 NOP56O00567 594 aaKnown RBP19.03■□□□□ 0.64
VRK2-204ENST00000428021 SUPT20HL2P0C7V6 817 aa19.03■□□□□ 0.64
VRK2-204ENST00000428021 SP4Q02446 784 aa19.03■□□□□ 0.64
VRK2-204ENST00000428021 C9orf50Q5SZB4 431 aa19.03■□□□□ 0.64
VRK2-204ENST00000428021 GDF6Q6KF10 455 aaPredicted RBP19.03■□□□□ 0.64
VRK2-204ENST00000428021 DAGLBQ8NCG7 672 aa19.03■□□□□ 0.64
VRK2-204ENST00000428021 ALG1Q9BT22 464 aa19.03■□□□□ 0.64
VRK2-204ENST00000428021 KATNAL1Q9BW62 490 aa19.03■□□□□ 0.64
VRK2-204ENST00000428021 AGO4Q9HCK5 861 aaKnown RBP19.03■□□□□ 0.64
VRK2-204ENST00000428021 GJB4Q9NTQ9 266 aa19.03■□□□□ 0.64
VRK2-204ENST00000428021 ORC3Q9UBD5 711 aaPredicted RBP19.03■□□□□ 0.64
VRK2-204ENST00000428021 HDAC6Q9UBN7 1215 aa19.03■□□□□ 0.64
VRK2-204ENST00000428021 GSTTP1A0A1W2PQM5 241 aa19.02■□□□□ 0.64
VRK2-204ENST00000428021 ZNF76P36508 570 aa19.02■□□□□ 0.64
VRK2-204ENST00000428021 FPGSQ05932 587 aa19.02■□□□□ 0.64
VRK2-204ENST00000428021 ITGB3BPQ13352 177 aaPredicted RBP19.02■□□□□ 0.64
VRK2-204ENST00000428021 HIC1Q14526 733 aa19.02■□□□□ 0.64
VRK2-204ENST00000428021 SHHQ15465 462 aa19.02■□□□□ 0.64
VRK2-204ENST00000428021 BLIDQ8IZY5 108 aa19.02■□□□□ 0.64
VRK2-204ENST00000428021 NSUN7Q8NE18 718 aaKnown RBP19.02■□□□□ 0.64
VRK2-204ENST00000428021 PHF20Q9BVI0 1012 aa19.02■□□□□ 0.64
VRK2-204ENST00000428021 GTF2IRD1Q9UHL9 959 aa19.02■□□□□ 0.64
VRK2-204ENST00000428021 KCNJ14Q9UNX9 436 aa19.02■□□□□ 0.64
VRK2-204ENST00000428021 LIMCH1Q9UPQ0 1083 aa19.02■□□□□ 0.64
VRK2-204ENST00000428021 SZT2Q5T011 3432 aa19.02■□□□□ 0.63
VRK2-204ENST00000428021 NFASCO94856 1347 aa19.01■□□□□ 0.63
VRK2-204ENST00000428021 TRIP12Q14669 1992 aaPredicted RBP19.01■□□□□ 0.63
VRK2-204ENST00000428021 H3BRB1 525 aa19.01■□□□□ 0.63
VRK2-204ENST00000428021 SOX1O00570 391 aaPredicted RBP19.01■□□□□ 0.63
VRK2-204ENST00000428021 CIITAP33076 1130 aa19.01■□□□□ 0.63
VRK2-204ENST00000428021 PTGISQ16647 500 aa19.01■□□□□ 0.63
VRK2-204ENST00000428021 GALNT17Q6IS24 598 aa19.01■□□□□ 0.63
VRK2-204ENST00000428021 C16orf59Q7L2K0 433 aa19.01■□□□□ 0.63
VRK2-204ENST00000428021 PLA2G4DQ86XP0 818 aa19.01■□□□□ 0.63
VRK2-204ENST00000428021 TRIM50Q86XT4 487 aa19.01■□□□□ 0.63
VRK2-204ENST00000428021 C7orf31Q8N865 590 aa19.01■□□□□ 0.63
VRK2-204ENST00000428021 WNT8AQ9H1J5 351 aa19.01■□□□□ 0.63
VRK2-204ENST00000428021 TUT1Q9H6E5 874 aaKnown RBP19.01■□□□□ 0.63
VRK2-204ENST00000428021 JAK2O60674 1132 aa19■□□□□ 0.63
VRK2-204ENST00000428021 CSF2RAP15509 400 aa19■□□□□ 0.63
VRK2-204ENST00000428021 TCF7P36402 384 aaPredicted RBP19■□□□□ 0.63
VRK2-204ENST00000428021 UTP14CQ5TAP6 766 aaKnown RBP19■□□□□ 0.63
VRK2-204ENST00000428021 SEPT1Q8WYJ6 367 aa19■□□□□ 0.63
VRK2-204ENST00000428021 JPH1Q9HDC5 661 aaPredicted RBP19■□□□□ 0.63
VRK2-204ENST00000428021 SLC9A2Q9UBY0 812 aa19■□□□□ 0.63
VRK2-204ENST00000428021 GTF3C3Q9Y5Q9 886 aa19■□□□□ 0.63
VRK2-204ENST00000428021 DHX15O43143 795 aaKnown RBP18.99■□□□□ 0.63
VRK2-204ENST00000428021 HOXC8P31273 242 aa18.99■□□□□ 0.63
VRK2-204ENST00000428021 USP11P51784 963 aa18.99■□□□□ 0.63
VRK2-204ENST00000428021 CCL23P55773 120 aa18.99■□□□□ 0.63
VRK2-204ENST00000428021 ZNF200P98182 395 aaPredicted RBP18.99■□□□□ 0.63
VRK2-204ENST00000428021 PPIGQ13427 754 aaKnown RBP eCLIP18.99■□□□□ 0.63
VRK2-204ENST00000428021 LRIT3Q3SXY7 679 aa18.99■□□□□ 0.63
VRK2-204ENST00000428021 TMEM199Q8N511 208 aa18.99■□□□□ 0.63
VRK2-204ENST00000428021 DHX38Q92620 1227 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms