RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 TYW1BQ6NUM6 668 aa21.13■□□□□ 0.97
PSPC1-202ENST00000427943 METTL7BQ6UX53 244 aa21.13■□□□□ 0.97
PSPC1-202ENST00000427943 Q6ZUG5 572 aa21.13■□□□□ 0.97
PSPC1-202ENST00000427943 LRRC8DQ7L1W4 858 aa21.13■□□□□ 0.97
PSPC1-202ENST00000427943 NLRX1Q86UT6 975 aa21.13■□□□□ 0.97
PSPC1-202ENST00000427943 MAFAQ8NHW3 353 aaPredicted RBP21.13■□□□□ 0.97
PSPC1-202ENST00000427943 WNT8BQ93098 351 aa21.13■□□□□ 0.97
PSPC1-202ENST00000427943 FAM217BQ9NTX9 383 aaPredicted RBP21.13■□□□□ 0.97
PSPC1-202ENST00000427943 MSRAQ9UJ68 235 aa21.13■□□□□ 0.97
PSPC1-202ENST00000427943 PCDHA6Q9UN73 950 aa21.13■□□□□ 0.97
PSPC1-202ENST00000427943 PCDHA8Q9Y5H6 950 aa21.13■□□□□ 0.97
PSPC1-202ENST00000427943 H3BRB1 525 aa21.12■□□□□ 0.97
PSPC1-202ENST00000427943 ACTN1P12814 892 aa21.12■□□□□ 0.97
PSPC1-202ENST00000427943 SELPP16109 830 aa21.12■□□□□ 0.97
PSPC1-202ENST00000427943 ATP2A2P16615 1042 aaKnown RBP21.12■□□□□ 0.97
PSPC1-202ENST00000427943 BLOC1S2Q6QNY1 142 aa21.12■□□□□ 0.97
PSPC1-202ENST00000427943 TRIM50Q86XT4 487 aa21.12■□□□□ 0.97
PSPC1-202ENST00000427943 BRF1Q92994 677 aa21.12■□□□□ 0.97
PSPC1-202ENST00000427943 GPR20Q99678 358 aa21.12■□□□□ 0.97
PSPC1-202ENST00000427943 TUT1Q9H6E5 874 aaKnown RBP21.12■□□□□ 0.97
PSPC1-202ENST00000427943 MICAL3Q7RTP6 2002 aa21.11■□□□□ 0.97
PSPC1-202ENST00000427943 REC8O95072 547 aa21.11■□□□□ 0.97
PSPC1-202ENST00000427943 CKBP12277 381 aa21.11■□□□□ 0.97
PSPC1-202ENST00000427943 MYOGP15173 224 aa21.11■□□□□ 0.97
PSPC1-202ENST00000427943 ITGB5P18084 799 aa21.11■□□□□ 0.97
PSPC1-202ENST00000427943 RBL2Q08999 1139 aa21.11■□□□□ 0.97
PSPC1-202ENST00000427943 PTK7Q13308 1070 aa21.11■□□□□ 0.97
PSPC1-202ENST00000427943 TRIM71Q2Q1W2 868 aaKnown RBP21.11■□□□□ 0.97
PSPC1-202ENST00000427943 UTP14CQ5TAP6 766 aaKnown RBP21.11■□□□□ 0.97
PSPC1-202ENST00000427943 PGBD1Q96JS3 809 aa21.11■□□□□ 0.97
PSPC1-202ENST00000427943 PKD2L1Q9P0L9 805 aa21.11■□□□□ 0.97
PSPC1-202ENST00000427943 V9GY48 417 aaPredicted RBP21.11■□□□□ 0.97
PSPC1-202ENST00000427943 UNC80Q8N2C7 3258 aa21.11■□□□□ 0.97
PSPC1-202ENST00000427943 STXBP3O00186 592 aa21.1■□□□□ 0.97
PSPC1-202ENST00000427943 ATP9AO75110 1047 aa21.1■□□□□ 0.97
PSPC1-202ENST00000427943 SMIM10L2AP0DMW4 78 aa21.1■□□□□ 0.97
PSPC1-202ENST00000427943 SMIM10L2BP0DMW5 78 aa21.1■□□□□ 0.97
PSPC1-202ENST00000427943 METAP2P50579 478 aaKnown RBP eCLIP21.1■□□□□ 0.97
PSPC1-202ENST00000427943 GPNMBQ14956 572 aa21.1■□□□□ 0.97
PSPC1-202ENST00000427943 PPP1R18Q6NYC8 613 aa21.1■□□□□ 0.97
PSPC1-202ENST00000427943 GPRASP2Q96D09 838 aa21.1■□□□□ 0.97
PSPC1-202ENST00000427943 SENP7Q9BQF6 1050 aa21.1■□□□□ 0.97
PSPC1-202ENST00000427943 PRDM12Q9H4Q4 367 aa21.1■□□□□ 0.97
PSPC1-202ENST00000427943 UBIAD1Q9Y5Z9 338 aa21.1■□□□□ 0.97
PSPC1-202ENST00000427943 SIP14410 1827 aa21.1■□□□□ 0.97
PSPC1-202ENST00000427943 CHD7Q9P2D1 2997 aa21.09■□□□□ 0.97
PSPC1-202ENST00000427943 C17orf102A2RUQ5 167 aa21.09■□□□□ 0.97
PSPC1-202ENST00000427943 KCNA2P16389 499 aa21.09■□□□□ 0.97
PSPC1-202ENST00000427943 RPS6KB1P23443 525 aa21.09■□□□□ 0.97
PSPC1-202ENST00000427943 ADD1P35611 737 aaKnown RBP21.09■□□□□ 0.97
PSPC1-202ENST00000427943 ADCY7P51828 1080 aa21.09■□□□□ 0.97
PSPC1-202ENST00000427943 RCAN1P53805 252 aa21.09■□□□□ 0.97
PSPC1-202ENST00000427943 MTMR1Q13613 665 aa21.09■□□□□ 0.97
PSPC1-202ENST00000427943 ZNF618Q5T7W0 954 aa21.09■□□□□ 0.97
PSPC1-202ENST00000427943 USP26Q9BXU7 913 aa21.09■□□□□ 0.97
PSPC1-202ENST00000427943 EHMT1Q9H9B1 1298 aa21.09■□□□□ 0.97
PSPC1-202ENST00000427943 SLC28A3Q9HAS3 691 aa21.09■□□□□ 0.97
PSPC1-202ENST00000427943 RIC8AQ9NPQ8 531 aa21.09■□□□□ 0.97
PSPC1-202ENST00000427943 PRUNE2Q8WUY3 3088 aa21.09■□□□□ 0.97
PSPC1-202ENST00000427943 NBNO60934 754 aa21.08■□□□□ 0.97
PSPC1-202ENST00000427943 ATP6V0A1Q93050 837 aa21.08■□□□□ 0.97
PSPC1-202ENST00000427943 SLC9A7Q96T83 725 aa21.08■□□□□ 0.97
PSPC1-202ENST00000427943 TMEM260Q9NX78 707 aa21.08■□□□□ 0.97
PSPC1-202ENST00000427943 BARHL2Q9NY43 387 aa21.08■□□□□ 0.97
PSPC1-202ENST00000427943 PCDHA11Q9Y5I1 949 aa21.08■□□□□ 0.97
PSPC1-202ENST00000427943 SMCO2A6NFE2 343 aa21.07■□□□□ 0.96
PSPC1-202ENST00000427943 hCG_1984214I3L0E3 225 aa21.07■□□□□ 0.96
PSPC1-202ENST00000427943 TCF7P36402 384 aaPredicted RBP21.07■□□□□ 0.96
PSPC1-202ENST00000427943 TCTN1Q2MV58 587 aa21.07■□□□□ 0.96
PSPC1-202ENST00000427943 PPP2R2DQ66LE6 453 aa21.07■□□□□ 0.96
PSPC1-202ENST00000427943 TRAF7Q6Q0C0 670 aa21.07■□□□□ 0.96
PSPC1-202ENST00000427943 SERINC5Q86VE9 423 aa21.07■□□□□ 0.96
PSPC1-202ENST00000427943 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.07■□□□□ 0.96
PSPC1-202ENST00000427943 ZNF713Q8N859 430 aaPredicted RBP21.07■□□□□ 0.96
PSPC1-202ENST00000427943 GIMAP8Q8ND71 665 aaPredicted RBP21.07■□□□□ 0.96
PSPC1-202ENST00000427943 CDHR1Q96JP9 859 aa21.07■□□□□ 0.96
PSPC1-202ENST00000427943 ANO3Q9BYT9 981 aa21.07■□□□□ 0.96
PSPC1-202ENST00000427943 RNPEPQ9H4A4 650 aa21.07■□□□□ 0.96
PSPC1-202ENST00000427943 ZNF215Q9UL58 517 aaPredicted RBP21.07■□□□□ 0.96
PSPC1-202ENST00000427943 NID2Q14112 1375 aa21.07■□□□□ 0.96
PSPC1-202ENST00000427943 COL4A4P53420 1690 aaPredicted RBP21.06■□□□□ 0.96
PSPC1-202ENST00000427943 TREHO43280 583 aa21.06■□□□□ 0.96
PSPC1-202ENST00000427943 BAIAP3O94812 1187 aa21.06■□□□□ 0.96
PSPC1-202ENST00000427943 HOXC8P31273 242 aa21.06■□□□□ 0.96
PSPC1-202ENST00000427943 THPOP40225 353 aa21.06■□□□□ 0.96
PSPC1-202ENST00000427943 MBTPS1Q14703 1052 aa21.06■□□□□ 0.96
PSPC1-202ENST00000427943 GAS2L1Q99501 681 aaPredicted RBP21.06■□□□□ 0.96
PSPC1-202ENST00000427943 JADE2Q9NQC1 790 aa21.06■□□□□ 0.96
PSPC1-202ENST00000427943 SETD4Q9NVD3 440 aa21.06■□□□□ 0.96
PSPC1-202ENST00000427943 CCDC196A0A1B0GTZ2 297 aa21.05■□□□□ 0.96
PSPC1-202ENST00000427943 PARNO95453 639 aaKnown RBP21.05■□□□□ 0.96
PSPC1-202ENST00000427943 CXCL10P02778 98 aa21.05■□□□□ 0.96
PSPC1-202ENST00000427943 CA3P07451 260 aa21.05■□□□□ 0.96
PSPC1-202ENST00000427943 KCNJ6P48051 423 aa21.05■□□□□ 0.96
PSPC1-202ENST00000427943 WDR5P61964 334 aaKnown RBP21.05■□□□□ 0.96
PSPC1-202ENST00000427943 CNKSR3Q6P9H4 555 aa21.05■□□□□ 0.96
PSPC1-202ENST00000427943 GSTTP1A0A1W2PQM5 241 aa21.04■□□□□ 0.96
PSPC1-202ENST00000427943 PPFIA3O75145 1194 aa21.04■□□□□ 0.96
PSPC1-202ENST00000427943 SCG2P13521 617 aa21.04■□□□□ 0.96
PSPC1-202ENST00000427943 PSMA5P28066 241 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms