RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 TUT1Q9H6E5 874 aaKnown RBP23.63■■□□□ 1.37
HSPG2-205ENST00000427897 PKD2L1Q9P0L9 805 aa23.63■■□□□ 1.37
HSPG2-205ENST00000427897 GTF2IRD1Q9UHL9 959 aa23.63■■□□□ 1.37
HSPG2-205ENST00000427897 ZNF215Q9UL58 517 aaPredicted RBP23.63■■□□□ 1.37
HSPG2-205ENST00000427897 ZBBXA8MT70 800 aa23.62■■□□□ 1.37
HSPG2-205ENST00000427897 PITPNM1O00562 1244 aa23.62■■□□□ 1.37
HSPG2-205ENST00000427897 PFKMP08237 780 aa23.62■■□□□ 1.37
HSPG2-205ENST00000427897 ACTN1P12814 892 aa23.62■■□□□ 1.37
HSPG2-205ENST00000427897 SEMA3FQ13275 785 aa23.62■■□□□ 1.37
HSPG2-205ENST00000427897 AP3B2Q13367 1082 aa23.62■■□□□ 1.37
HSPG2-205ENST00000427897 MCTP2Q6DN12 878 aa23.62■■□□□ 1.37
HSPG2-205ENST00000427897 FAM109BQ6ICB4 259 aaPredicted RBP23.62■■□□□ 1.37
HSPG2-205ENST00000427897 CPLX2Q6PUV4 134 aaKnown RBP23.62■■□□□ 1.37
HSPG2-205ENST00000427897 TRIM22Q8IYM9 498 aa23.62■■□□□ 1.37
HSPG2-205ENST00000427897 CAGE1Q8TC20 777 aa23.62■■□□□ 1.37
HSPG2-205ENST00000427897 PGBD1Q96JS3 809 aa23.62■■□□□ 1.37
HSPG2-205ENST00000427897 BCAS3Q9H6U6 928 aa23.62■■□□□ 1.37
HSPG2-205ENST00000427897 JADE2Q9NQC1 790 aa23.62■■□□□ 1.37
HSPG2-205ENST00000427897 UBIAD1Q9Y5Z9 338 aa23.62■■□□□ 1.37
HSPG2-205ENST00000427897 HAS3O00219 553 aa23.61■■□□□ 1.37
HSPG2-205ENST00000427897 LGALS2P05162 132 aa23.61■■□□□ 1.37
HSPG2-205ENST00000427897 RFC2P35250 354 aa23.61■■□□□ 1.37
HSPG2-205ENST00000427897 TYW1BQ6NUM6 668 aa23.61■■□□□ 1.37
HSPG2-205ENST00000427897 GPR20Q99678 358 aa23.61■■□□□ 1.37
HSPG2-205ENST00000427897 ANO3Q9BYT9 981 aa23.61■■□□□ 1.37
HSPG2-205ENST00000427897 NCOA5Q9HCD5 579 aaKnown RBP23.61■■□□□ 1.37
HSPG2-205ENST00000427897 TMEM260Q9NX78 707 aa23.61■■□□□ 1.37
HSPG2-205ENST00000427897 IQCF3P0C7M6 154 aa23.6■■□□□ 1.37
HSPG2-205ENST00000427897 HOXD8P13378 290 aaPredicted RBP23.6■■□□□ 1.37
HSPG2-205ENST00000427897 ITGB5P18084 799 aa23.6■■□□□ 1.37
HSPG2-205ENST00000427897 GNA11P29992 359 aa23.6■■□□□ 1.37
HSPG2-205ENST00000427897 SSRP1Q08945 709 aaKnown RBP23.6■■□□□ 1.37
HSPG2-205ENST00000427897 STK3Q13188 491 aa23.6■■□□□ 1.37
HSPG2-205ENST00000427897 JAKMIP3Q5VZ66 844 aa23.6■■□□□ 1.37
HSPG2-205ENST00000427897 HERVK_113Q902F9 699 aa23.6■■□□□ 1.37
HSPG2-205ENST00000427897 MXRA8Q9BRK3 442 aa23.6■■□□□ 1.37
HSPG2-205ENST00000427897 LARP6Q9BRS8 491 aaKnown RBP23.6■■□□□ 1.37
HSPG2-205ENST00000427897 C16orf70Q9BSU1 422 aa23.6■■□□□ 1.37
HSPG2-205ENST00000427897 RNF26Q9BY78 433 aaPredicted RBP23.6■■□□□ 1.37
HSPG2-205ENST00000427897 MTMR10Q9NXD2 777 aa23.6■■□□□ 1.37
HSPG2-205ENST00000427897 C17orf102A2RUQ5 167 aa23.59■■□□□ 1.37
HSPG2-205ENST00000427897 PPFIA3O75145 1194 aa23.59■■□□□ 1.37
HSPG2-205ENST00000427897 GNAT1P11488 350 aa23.59■■□□□ 1.37
HSPG2-205ENST00000427897 IFNAR1P17181 557 aa23.59■■□□□ 1.37
HSPG2-205ENST00000427897 PTK7Q13308 1070 aa23.59■■□□□ 1.37
HSPG2-205ENST00000427897 TOB2Q14106 344 aaPredicted RBP23.59■■□□□ 1.37
HSPG2-205ENST00000427897 CCDC148Q8NFR7 591 aa23.59■■□□□ 1.37
HSPG2-205ENST00000427897 BICD2Q8TD16 824 aa23.59■■□□□ 1.37
HSPG2-205ENST00000427897 AFAP1L1Q8TED9 768 aa23.59■■□□□ 1.37
HSPG2-205ENST00000427897 ZNF274Q96GC6 653 aaPredicted RBP23.59■■□□□ 1.37
HSPG2-205ENST00000427897 SDF4Q9BRK5 362 aa23.59■■□□□ 1.37
HSPG2-205ENST00000427897 SLC4A7Q9Y6M7 1214 aa23.59■■□□□ 1.37
HSPG2-205ENST00000427897 NID2Q14112 1375 aa23.59■■□□□ 1.37
HSPG2-205ENST00000427897 DOCK5Q9H7D0 1870 aa23.59■■□□□ 1.37
HSPG2-205ENST00000427897 ATP9AO75110 1047 aa23.58■■□□□ 1.37
HSPG2-205ENST00000427897 TCF7P36402 384 aaPredicted RBP23.58■■□□□ 1.37
HSPG2-205ENST00000427897 EVCP57679 992 aa23.58■■□□□ 1.37
HSPG2-205ENST00000427897 SEPT1Q8WYJ6 367 aa23.58■■□□□ 1.37
HSPG2-205ENST00000427897 ATP6V0A1Q93050 837 aa23.58■■□□□ 1.37
HSPG2-205ENST00000427897 SELPP16109 830 aa23.57■■□□□ 1.36
HSPG2-205ENST00000427897 NLRP5P59047 1200 aa23.57■■□□□ 1.36
HSPG2-205ENST00000427897 LRRC8DQ7L1W4 858 aa23.57■■□□□ 1.36
HSPG2-205ENST00000427897 REXO1Q8N1G1 1221 aaKnown RBP23.57■■□□□ 1.36
HSPG2-205ENST00000427897 GLG1Q92896 1179 aa23.57■■□□□ 1.36
HSPG2-205ENST00000427897 ZMYND12Q9H0C1 365 aa23.57■■□□□ 1.36
HSPG2-205ENST00000427897 MSRAQ9UJ68 235 aa23.57■■□□□ 1.36
HSPG2-205ENST00000427897 ESYT2A0FGR8 921 aa23.56■■□□□ 1.36
HSPG2-205ENST00000427897 PARNO95453 639 aaKnown RBP23.56■■□□□ 1.36
HSPG2-205ENST00000427897 SMIM10L2AP0DMW4 78 aa23.56■■□□□ 1.36
HSPG2-205ENST00000427897 SMIM10L2BP0DMW5 78 aa23.56■■□□□ 1.36
HSPG2-205ENST00000427897 KCNA2P16389 499 aa23.56■■□□□ 1.36
HSPG2-205ENST00000427897 DNAJB2P25686 324 aa23.56■■□□□ 1.36
HSPG2-205ENST00000427897 SREBF1P36956 1147 aa23.56■■□□□ 1.36
HSPG2-205ENST00000427897 CLK2P49760 499 aaKnown RBP23.56■■□□□ 1.36
HSPG2-205ENST00000427897 ZNF200P98182 395 aaPredicted RBP23.56■■□□□ 1.36
HSPG2-205ENST00000427897 PKN1Q16512 942 aa23.56■■□□□ 1.36
HSPG2-205ENST00000427897 CEP55Q53EZ4 464 aa23.56■■□□□ 1.36
HSPG2-205ENST00000427897 SEMA6BQ9H3T3 888 aa23.56■■□□□ 1.36
HSPG2-205ENST00000427897 KCNH7Q9NS40 1196 aa23.56■■□□□ 1.36
HSPG2-205ENST00000427897 GRXCR1A8MXD5 290 aa23.55■■□□□ 1.36
HSPG2-205ENST00000427897 CKBP12277 381 aa23.55■■□□□ 1.36
HSPG2-205ENST00000427897 ANAPC15P60006 121 aa23.55■■□□□ 1.36
HSPG2-205ENST00000427897 ARHGAP4P98171 946 aa23.55■■□□□ 1.36
HSPG2-205ENST00000427897 ANKRD1Q15327 319 aa23.55■■□□□ 1.36
HSPG2-205ENST00000427897 NTRK3Q16288 839 aa23.55■■□□□ 1.36
HSPG2-205ENST00000427897 SLKQ9H2G2 1235 aaPredicted RBP23.55■■□□□ 1.36
HSPG2-205ENST00000427897 JPH1Q9HDC5 661 aaPredicted RBP23.55■■□□□ 1.36
HSPG2-205ENST00000427897 VPS54Q9P1Q0 977 aa23.55■■□□□ 1.36
HSPG2-205ENST00000427897 SLC9A2Q9UBY0 812 aa23.55■■□□□ 1.36
HSPG2-205ENST00000427897 RAB30Q15771 203 aa23.54■■□□□ 1.36
HSPG2-205ENST00000427897 RASIP1Q5U651 963 aa23.54■■□□□ 1.36
HSPG2-205ENST00000427897 TRIM50Q86XT4 487 aa23.54■■□□□ 1.36
HSPG2-205ENST00000427897 TIFAQ96CG3 184 aa23.54■■□□□ 1.36
HSPG2-205ENST00000427897 RNPEPQ9H4A4 650 aa23.54■■□□□ 1.36
HSPG2-205ENST00000427897 SMARCAD1Q9H4L7 1026 aa23.54■■□□□ 1.36
HSPG2-205ENST00000427897 AZI2Q9H6S1 392 aa23.54■■□□□ 1.36
HSPG2-205ENST00000427897 CXXC1Q9P0U4 656 aaPredicted RBP23.54■■□□□ 1.36
HSPG2-205ENST00000427897 STXBP5LQ9Y2K9 1186 aa23.54■■□□□ 1.36
HSPG2-205ENST00000427897 TRIP12Q14669 1992 aaPredicted RBP23.53■■□□□ 1.36
HSPG2-205ENST00000427897 TMEM265A0A087WTH1 108 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms