RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 ADCY7P51828 1080 aa12.33□□□□□ -0.44
LINC01238-202ENST00000426962 OTOP2Q7RTS6 562 aa12.33□□□□□ -0.44
LINC01238-202ENST00000426962 CCDC155Q8N6L0 562 aa12.33□□□□□ -0.44
LINC01238-202ENST00000426962 VWCEQ96DN2 955 aa12.33□□□□□ -0.44
LINC01238-202ENST00000426962 CTAGE1Q96RT6 745 aa12.33□□□□□ -0.44
LINC01238-202ENST00000426962 GPR20Q99678 358 aa12.33□□□□□ -0.44
LINC01238-202ENST00000426962 TUT1Q9H6E5 874 aaKnown RBP12.33□□□□□ -0.44
LINC01238-202ENST00000426962 JADE2Q9NQC1 790 aa12.33□□□□□ -0.44
LINC01238-202ENST00000426962 TMEM265A0A087WTH1 108 aa12.32□□□□□ -0.44
LINC01238-202ENST00000426962 ATP9AO75110 1047 aa12.32□□□□□ -0.44
LINC01238-202ENST00000426962 LGALS2P05162 132 aa12.32□□□□□ -0.44
LINC01238-202ENST00000426962 SCG2P13521 617 aa12.32□□□□□ -0.44
LINC01238-202ENST00000426962 KCNA2P16389 499 aa12.32□□□□□ -0.44
LINC01238-202ENST00000426962 CLK2P49760 499 aaKnown RBP12.32□□□□□ -0.44
LINC01238-202ENST00000426962 AKAP17AQ02040 695 aaKnown RBP12.32□□□□□ -0.44
LINC01238-202ENST00000426962 PTK7Q13308 1070 aa12.32□□□□□ -0.44
LINC01238-202ENST00000426962 MTMR1Q13613 665 aa12.32□□□□□ -0.44
LINC01238-202ENST00000426962 TOB2Q14106 344 aaPredicted RBP12.32□□□□□ -0.44
LINC01238-202ENST00000426962 NTRK3Q16288 839 aa12.32□□□□□ -0.44
LINC01238-202ENST00000426962 PKN1Q16512 942 aa12.32□□□□□ -0.44
LINC01238-202ENST00000426962 DEFB128Q7Z7B8 93 aa12.32□□□□□ -0.44
LINC01238-202ENST00000426962 AFAP1L1Q8TED9 768 aa12.32□□□□□ -0.44
LINC01238-202ENST00000426962 CCDC12Q8WUD4 166 aaPredicted RBP12.32□□□□□ -0.44
LINC01238-202ENST00000426962 FAM161BQ96MY7 647 aa12.32□□□□□ -0.44
LINC01238-202ENST00000426962 MXRA8Q9BRK3 442 aa12.32□□□□□ -0.44
LINC01238-202ENST00000426962 STXBP5LQ9Y2K9 1186 aa12.32□□□□□ -0.44
LINC01238-202ENST00000426962 MYH7BA7E2Y1 1941 aa12.32□□□□□ -0.44
LINC01238-202ENST00000426962 NID2Q14112 1375 aa12.31□□□□□ -0.44
LINC01238-202ENST00000426962 PARNO95453 639 aaKnown RBP12.31□□□□□ -0.44
LINC01238-202ENST00000426962 SELPP16109 830 aa12.31□□□□□ -0.44
LINC01238-202ENST00000426962 IFNAR1P17181 557 aa12.31□□□□□ -0.44
LINC01238-202ENST00000426962 CCT2P78371 535 aaKnown RBP12.31□□□□□ -0.44
LINC01238-202ENST00000426962 ZNF200P98182 395 aaPredicted RBP12.31□□□□□ -0.44
LINC01238-202ENST00000426962 RBL2Q08999 1139 aa12.31□□□□□ -0.44
LINC01238-202ENST00000426962 AP3B2Q13367 1082 aa12.31□□□□□ -0.44
LINC01238-202ENST00000426962 MCTP2Q6DN12 878 aa12.31□□□□□ -0.44
LINC01238-202ENST00000426962 SEPT1Q8WYJ6 367 aa12.31□□□□□ -0.44
LINC01238-202ENST00000426962 PHKBQ93100 1093 aa12.31□□□□□ -0.44
LINC01238-202ENST00000426962 ZNF274Q96GC6 653 aaPredicted RBP12.31□□□□□ -0.44
LINC01238-202ENST00000426962 GUCD1Q96NT3 240 aa12.31□□□□□ -0.44
LINC01238-202ENST00000426962 RNF26Q9BY78 433 aaPredicted RBP12.31□□□□□ -0.44
LINC01238-202ENST00000426962 ANO3Q9BYT9 981 aa12.31□□□□□ -0.44
LINC01238-202ENST00000426962 ZMYND12Q9H0C1 365 aa12.31□□□□□ -0.44
LINC01238-202ENST00000426962 C6orf50Q9HD87 102 aa12.31□□□□□ -0.44
LINC01238-202ENST00000426962 CXXC1Q9P0U4 656 aaPredicted RBP12.31□□□□□ -0.44
LINC01238-202ENST00000426962 ESYT2A0FGR8 921 aa12.3□□□□□ -0.44
LINC01238-202ENST00000426962 C17orf102A2RUQ5 167 aa12.3□□□□□ -0.44
LINC01238-202ENST00000426962 GRXCR1A8MXD5 290 aa12.3□□□□□ -0.44
LINC01238-202ENST00000426962 EIF5BO60841 1220 aaKnown RBP12.3□□□□□ -0.44
LINC01238-202ENST00000426962 GNAT1P11488 350 aa12.3□□□□□ -0.44
LINC01238-202ENST00000426962 CKBP12277 381 aa12.3□□□□□ -0.44
LINC01238-202ENST00000426962 ACTN1P12814 892 aa12.3□□□□□ -0.44
LINC01238-202ENST00000426962 DNAJB2P25686 324 aa12.3□□□□□ -0.44
LINC01238-202ENST00000426962 GNA11P29992 359 aa12.3□□□□□ -0.44
LINC01238-202ENST00000426962 SREBF1P36956 1147 aa12.3□□□□□ -0.44
LINC01238-202ENST00000426962 SP4Q02446 784 aa12.3□□□□□ -0.44
LINC01238-202ENST00000426962 HIC1Q14526 733 aa12.3□□□□□ -0.44
LINC01238-202ENST00000426962 CEP55Q53EZ4 464 aa12.3□□□□□ -0.44
LINC01238-202ENST00000426962 UTP14CQ5TAP6 766 aaKnown RBP12.3□□□□□ -0.44
LINC01238-202ENST00000426962 DHX38Q92620 1227 aaKnown RBP12.3□□□□□ -0.44
LINC01238-202ENST00000426962 TIFAQ96CG3 184 aa12.3□□□□□ -0.44
LINC01238-202ENST00000426962 PGBD1Q96JS3 809 aa12.3□□□□□ -0.44
LINC01238-202ENST00000426962 SLC26A6Q9BXS9 759 aa12.3□□□□□ -0.44
LINC01238-202ENST00000426962 PBX4Q9BYU1 374 aa12.3□□□□□ -0.44
LINC01238-202ENST00000426962 UPF3BQ9BZI7 483 aaKnown RBP12.3□□□□□ -0.44
LINC01238-202ENST00000426962 FTOQ9C0B1 505 aaKnown RBP eCLIP12.3□□□□□ -0.44
LINC01238-202ENST00000426962 TTYH1Q9H313 450 aaPredicted RBP12.3□□□□□ -0.44
LINC01238-202ENST00000426962 RNPEPQ9H4A4 650 aa12.3□□□□□ -0.44
LINC01238-202ENST00000426962 KCNH7Q9NS40 1196 aa12.3□□□□□ -0.44
LINC01238-202ENST00000426962 PDRG1Q9NUG6 133 aa12.3□□□□□ -0.44
LINC01238-202ENST00000426962 TMEM260Q9NX78 707 aa12.3□□□□□ -0.44
LINC01238-202ENST00000426962 ZNF215Q9UL58 517 aaPredicted RBP12.3□□□□□ -0.44
LINC01238-202ENST00000426962 SLC4A7Q9Y6M7 1214 aa12.3□□□□□ -0.44
LINC01238-202ENST00000426962 GSTTP1A0A1W2PQM5 241 aa12.29□□□□□ -0.44
LINC01238-202ENST00000426962 ZBBXA8MT70 800 aa12.29□□□□□ -0.44
LINC01238-202ENST00000426962 MEIS1O00470 390 aa12.29□□□□□ -0.44
LINC01238-202ENST00000426962 SMIM10L2AP0DMW4 78 aa12.29□□□□□ -0.44
LINC01238-202ENST00000426962 SMIM10L2BP0DMW5 78 aa12.29□□□□□ -0.44
LINC01238-202ENST00000426962 HOXC8P31273 242 aa12.29□□□□□ -0.44
LINC01238-202ENST00000426962 TCF7P36402 384 aaPredicted RBP12.29□□□□□ -0.44
LINC01238-202ENST00000426962 ZNF76P36508 570 aa12.29□□□□□ -0.44
LINC01238-202ENST00000426962 ANAPC15P60006 121 aa12.29□□□□□ -0.44
LINC01238-202ENST00000426962 GPNMBQ14956 572 aa12.29□□□□□ -0.44
LINC01238-202ENST00000426962 TRIM71Q2Q1W2 868 aaKnown RBP12.29□□□□□ -0.44
LINC01238-202ENST00000426962 JAKMIP3Q5VZ66 844 aa12.29□□□□□ -0.44
LINC01238-202ENST00000426962 LRRC8DQ7L1W4 858 aa12.29□□□□□ -0.44
LINC01238-202ENST00000426962 SERINC5Q86VE9 423 aa12.29□□□□□ -0.44
LINC01238-202ENST00000426962 CYP2W1Q8TAV3 490 aa12.29□□□□□ -0.44
LINC01238-202ENST00000426962 ATP6V0A1Q93050 837 aa12.29□□□□□ -0.44
LINC01238-202ENST00000426962 CDX2Q99626 313 aaPredicted RBP12.29□□□□□ -0.44
LINC01238-202ENST00000426962 NCOA5Q9HCD5 579 aaKnown RBP12.29□□□□□ -0.44
LINC01238-202ENST00000426962 PKD2L1Q9P0L9 805 aa12.29□□□□□ -0.44
LINC01238-202ENST00000426962 MSRAQ9UJ68 235 aa12.29□□□□□ -0.44
LINC01238-202ENST00000426962 TELO2Q9Y4R8 837 aa12.29□□□□□ -0.44
LINC01238-202ENST00000426962 CPLX1O14810 134 aa12.28□□□□□ -0.44
LINC01238-202ENST00000426962 TREHO43280 583 aa12.28□□□□□ -0.44
LINC01238-202ENST00000426962 PPFIA3O75145 1194 aa12.28□□□□□ -0.44
LINC01238-202ENST00000426962 CYP3A4P08684 503 aa12.28□□□□□ -0.44
LINC01238-202ENST00000426962 ARP10275 920 aa12.28□□□□□ -0.44
LINC01238-202ENST00000426962 ATP2A2P16615 1042 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms