RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 ZNF165P49910 485 aa16.94■□□□□ 0.3
GINS3-203ENST00000426538 ALDH5A1P51649 535 aaPredicted RBP16.94■□□□□ 0.3
GINS3-203ENST00000426538 DPYDQ12882 1025 aa16.94■□□□□ 0.3
GINS3-203ENST00000426538 HYIQ5T013 277 aa16.94■□□□□ 0.3
GINS3-203ENST00000426538 TRIML1Q8N9V2 468 aa16.94■□□□□ 0.3
GINS3-203ENST00000426538 SPATA20Q8TB22 786 aa16.94■□□□□ 0.3
GINS3-203ENST00000426538 LARP4BQ92615 738 aaKnown RBP16.94■□□□□ 0.3
GINS3-203ENST00000426538 GSDMAQ96QA5 445 aa16.94■□□□□ 0.3
GINS3-203ENST00000426538 PORCNQ9H237 461 aa16.94■□□□□ 0.3
GINS3-203ENST00000426538 EFCC1Q9HA90 598 aa16.94■□□□□ 0.3
GINS3-203ENST00000426538 PKD2L1Q9P0L9 805 aa16.94■□□□□ 0.3
GINS3-203ENST00000426538 TCEAL9Q9UHQ7 104 aa16.94■□□□□ 0.3
GINS3-203ENST00000426538 KIAA1024Q9UPX6 916 aa16.94■□□□□ 0.3
GINS3-203ENST00000426538 EIF3JO75822 258 aaKnown RBP16.93■□□□□ 0.3
GINS3-203ENST00000426538 CUL4BQ13620 913 aa16.93■□□□□ 0.3
GINS3-203ENST00000426538 DHX8Q14562 1220 aaKnown RBP16.93■□□□□ 0.3
GINS3-203ENST00000426538 TMEM119Q4V9L6 283 aa16.93■□□□□ 0.3
GINS3-203ENST00000426538 CATSPER3Q86XQ3 398 aa16.93■□□□□ 0.3
GINS3-203ENST00000426538 FAM133AQ8N9E0 248 aa16.93■□□□□ 0.3
GINS3-203ENST00000426538 INPP4AQ96PE3 977 aaPredicted RBP16.93■□□□□ 0.3
GINS3-203ENST00000426538 EIF2AK1Q9BQI3 630 aaKnown RBP16.93■□□□□ 0.3
GINS3-203ENST00000426538 LRRC27Q9C0I9 530 aa16.93■□□□□ 0.3
GINS3-203ENST00000426538 BLZF1Q9H2G9 400 aa16.93■□□□□ 0.3
GINS3-203ENST00000426538 R3HDMLQ9H3Y0 253 aa16.93■□□□□ 0.3
GINS3-203ENST00000426538 IVNS1ABPQ9Y6Y0 642 aa16.93■□□□□ 0.3
GINS3-203ENST00000426538 A0A087WWV3 80 aa16.93■□□□□ 0.3
GINS3-203ENST00000426538 DDX39AO00148 427 aaKnown RBP16.93■□□□□ 0.3
GINS3-203ENST00000426538 PGK2P07205 417 aa16.93■□□□□ 0.3
GINS3-203ENST00000426538 CASP1P29466 404 aa16.93■□□□□ 0.3
GINS3-203ENST00000426538 PDE4DQ08499 809 aa16.93■□□□□ 0.3
GINS3-203ENST00000426538 SREBF2Q12772 1141 aa16.93■□□□□ 0.3
GINS3-203ENST00000426538 ECM1Q16610 540 aa16.93■□□□□ 0.3
GINS3-203ENST00000426538 FAM110CQ1W6H9 321 aa16.93■□□□□ 0.3
GINS3-203ENST00000426538 ANP32BQ92688 251 aaKnown RBP16.93■□□□□ 0.3
GINS3-203ENST00000426538 RAD54LQ92698 747 aa16.93■□□□□ 0.3
GINS3-203ENST00000426538 HHIPL1Q96JK4 782 aa16.93■□□□□ 0.3
GINS3-203ENST00000426538 MTRQ99707 1265 aa16.93■□□□□ 0.3
GINS3-203ENST00000426538 POLR3CQ9BUI4 534 aaPredicted RBP16.93■□□□□ 0.3
GINS3-203ENST00000426538 UNC45AQ9H3U1 944 aa16.93■□□□□ 0.3
GINS3-203ENST00000426538 MAN1B1Q9UKM7 699 aa16.93■□□□□ 0.3
GINS3-203ENST00000426538 POTEB3A0JP26 581 aa16.92■□□□□ 0.3
GINS3-203ENST00000426538 SOWAHBA6NEL2 793 aa16.92■□□□□ 0.3
GINS3-203ENST00000426538 EML1O00423 815 aa16.92■□□□□ 0.3
GINS3-203ENST00000426538 IGF2BP3O00425 579 aaKnown RBP eCLIP16.92■□□□□ 0.3
GINS3-203ENST00000426538 STRNO43815 780 aa16.92■□□□□ 0.3
GINS3-203ENST00000426538 MED24O75448 989 aa16.92■□□□□ 0.3
GINS3-203ENST00000426538 XRCC6P12956 609 aaKnown RBP eCLIP16.92■□□□□ 0.3
GINS3-203ENST00000426538 FSTL1Q12841 308 aa16.92■□□□□ 0.3
GINS3-203ENST00000426538 EPHA7Q15375 998 aa16.92■□□□□ 0.3
GINS3-203ENST00000426538 TAF1CQ15572 869 aaPredicted RBP16.92■□□□□ 0.3
GINS3-203ENST00000426538 UVSSAQ2YD98 709 aa16.92■□□□□ 0.3
GINS3-203ENST00000426538 POTEBQ6S5H4 581 aa16.92■□□□□ 0.3
GINS3-203ENST00000426538 PAXIP1Q6ZW49 1069 aaPredicted RBP16.92■□□□□ 0.3
GINS3-203ENST00000426538 KCTD17Q8N5Z5 321 aa16.92■□□□□ 0.3
GINS3-203ENST00000426538 LRRC15Q8TF66 581 aa16.92■□□□□ 0.3
GINS3-203ENST00000426538 BLOC1S4Q9NUP1 217 aa16.92■□□□□ 0.3
GINS3-203ENST00000426538 RMND1Q9NWS8 449 aa16.92■□□□□ 0.3
GINS3-203ENST00000426538 DNM3Q9UQ16 869 aa16.92■□□□□ 0.3
GINS3-203ENST00000426538 FAM155AB1AL88 458 aaPredicted RBP16.91■□□□□ 0.3
GINS3-203ENST00000426538 DHX15O43143 795 aaKnown RBP16.91■□□□□ 0.3
GINS3-203ENST00000426538 ITGB3BPQ13352 177 aaPredicted RBP16.91■□□□□ 0.3
GINS3-203ENST00000426538 MCM6Q14566 821 aa16.91■□□□□ 0.3
GINS3-203ENST00000426538 DPCR1Q3MIW9 517 aa16.91■□□□□ 0.3
GINS3-203ENST00000426538 MIER3Q7Z3K6 550 aa16.91■□□□□ 0.3
GINS3-203ENST00000426538 IFNL1Q8IU54 200 aa16.91■□□□□ 0.3
GINS3-203ENST00000426538 CCDC47Q96A33 483 aaKnown RBP16.91■□□□□ 0.3
GINS3-203ENST00000426538 TUFT1Q9NNX1 390 aa16.91■□□□□ 0.3
GINS3-203ENST00000426538 DACH1Q9UI36 760 aa16.91■□□□□ 0.3
GINS3-203ENST00000426538 SAMM50Q9Y512 469 aa16.91■□□□□ 0.3
GINS3-203ENST00000426538 DNAJC25-GNG10A0A024R161 153 aa16.9■□□□□ 0.3
GINS3-203ENST00000426538 BECN2A8MW95 431 aa16.9■□□□□ 0.3
GINS3-203ENST00000426538 ATP9AO75110 1047 aa16.9■□□□□ 0.3
GINS3-203ENST00000426538 RPN1P04843 607 aaKnown RBP16.9■□□□□ 0.3
GINS3-203ENST00000426538 SPATA31C1P0DKV0 1188 aa16.9■□□□□ 0.3
GINS3-203ENST00000426538 CYP4A11Q02928 519 aa16.9■□□□□ 0.3
GINS3-203ENST00000426538 GRM1Q13255 1194 aa16.9■□□□□ 0.3
GINS3-203ENST00000426538 MORC3Q14149 939 aa16.9■□□□□ 0.3
GINS3-203ENST00000426538 C11orf57Q6ZUT1 292 aaPredicted RBP16.9■□□□□ 0.3
GINS3-203ENST00000426538 TPH2Q8IWU9 490 aa16.9■□□□□ 0.3
GINS3-203ENST00000426538 HSD17B14Q9BPX1 270 aa16.9■□□□□ 0.3
GINS3-203ENST00000426538 C7orf25Q9BPX7 421 aa16.9■□□□□ 0.3
GINS3-203ENST00000426538 CBX8Q9HC52 389 aa16.9■□□□□ 0.3
GINS3-203ENST00000426538 BMP2KQ9NSY1 1161 aaPredicted RBP16.9■□□□□ 0.3
GINS3-203ENST00000426538 RGL1Q9NZL6 768 aa16.9■□□□□ 0.3
GINS3-203ENST00000426538 ASTN1O14525 1302 aa16.9■□□□□ 0.3
GINS3-203ENST00000426538 POTEFA5A3E0 1075 aa16.9■□□□□ 0.3
GINS3-203ENST00000426538 SPATA31C2B4DYI2 1134 aa16.9■□□□□ 0.3
GINS3-203ENST00000426538 E9PMD0 336 aa16.9■□□□□ 0.3
GINS3-203ENST00000426538 RGS20O76081 388 aa16.9■□□□□ 0.3
GINS3-203ENST00000426538 SLITRK3O94933 977 aa16.9■□□□□ 0.3
GINS3-203ENST00000426538 MUTP22033 750 aa16.9■□□□□ 0.3
GINS3-203ENST00000426538 EDNRBP24530 442 aa16.9■□□□□ 0.3
GINS3-203ENST00000426538 KRT76Q01546 638 aa16.9■□□□□ 0.3
GINS3-203ENST00000426538 POTEGQ6S5H5 508 aa16.9■□□□□ 0.3
GINS3-203ENST00000426538 B3GNT9Q6UX72 402 aa16.9■□□□□ 0.3
GINS3-203ENST00000426538 KCNK18Q7Z418 384 aa16.9■□□□□ 0.3
GINS3-203ENST00000426538 ABRAQ8N0Z2 381 aa16.9■□□□□ 0.3
GINS3-203ENST00000426538 MLKLQ8NB16 471 aa16.9■□□□□ 0.3
GINS3-203ENST00000426538 NEK9Q8TD19 979 aa16.9■□□□□ 0.3
GINS3-203ENST00000426538 DYDC2Q96IM9 177 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms