RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 JADE2Q9NQC1 790 aa21.02■□□□□ 0.96
SMARCAL1-205ENST00000425815 CXXC1Q9P0U4 656 aaPredicted RBP21.02■□□□□ 0.96
SMARCAL1-205ENST00000425815 RBAK-RBAKDNI3L0D1 243 aa21.01■□□□□ 0.95
SMARCAL1-205ENST00000425815 LGALS2P05162 132 aa21.01■□□□□ 0.95
SMARCAL1-205ENST00000425815 IQCF3P0C7M6 154 aa21.01■□□□□ 0.95
SMARCAL1-205ENST00000425815 GPNMBQ14956 572 aa21.01■□□□□ 0.95
SMARCAL1-205ENST00000425815 C7orf31Q8N865 590 aa21.01■□□□□ 0.95
SMARCAL1-205ENST00000425815 KATNAL1Q9BW62 490 aa21.01■□□□□ 0.95
SMARCAL1-205ENST00000425815 HSFX4A0A1B0GTS1 333 aaPredicted RBP21■□□□□ 0.95
SMARCAL1-205ENST00000425815 HSFX3A0A1B0GWH4 333 aaPredicted RBP21■□□□□ 0.95
SMARCAL1-205ENST00000425815 PITPNM1O00562 1244 aa21■□□□□ 0.95
SMARCAL1-205ENST00000425815 FGBP02675 491 aa21■□□□□ 0.95
SMARCAL1-205ENST00000425815 IFNAR1P17181 557 aa21■□□□□ 0.95
SMARCAL1-205ENST00000425815 PSRC1Q6PGN9 363 aaPredicted RBP21■□□□□ 0.95
SMARCAL1-205ENST00000425815 WNT8BQ93098 351 aa21■□□□□ 0.95
SMARCAL1-205ENST00000425815 ANO3Q9BYT9 981 aa21■□□□□ 0.95
SMARCAL1-205ENST00000425815 GRXCR1A8MXD5 290 aa20.99■□□□□ 0.95
SMARCAL1-205ENST00000425815 H3BRB1 525 aa20.99■□□□□ 0.95
SMARCAL1-205ENST00000425815 FOSP01100 380 aaPredicted RBP20.99■□□□□ 0.95
SMARCAL1-205ENST00000425815 OTOP2Q7RTS6 562 aa20.99■□□□□ 0.95
SMARCAL1-205ENST00000425815 RPUSD2Q8IZ73 545 aaKnown RBP20.99■□□□□ 0.95
SMARCAL1-205ENST00000425815 ZNF274Q96GC6 653 aaPredicted RBP20.99■□□□□ 0.95
SMARCAL1-205ENST00000425815 MXRA8Q9BRK3 442 aa20.99■□□□□ 0.95
SMARCAL1-205ENST00000425815 ZMYND12Q9H0C1 365 aa20.99■□□□□ 0.95
SMARCAL1-205ENST00000425815 TTYH1Q9H313 450 aaPredicted RBP20.99■□□□□ 0.95
SMARCAL1-205ENST00000425815 TUT1Q9H6E5 874 aaKnown RBP20.99■□□□□ 0.95
SMARCAL1-205ENST00000425815 PDRG1Q9NUG6 133 aa20.99■□□□□ 0.95
SMARCAL1-205ENST00000425815 ESYT2A0FGR8 921 aa20.98■□□□□ 0.95
SMARCAL1-205ENST00000425815 SEC24BO95487 1268 aa20.98■□□□□ 0.95
SMARCAL1-205ENST00000425815 ARP10275 920 aa20.98■□□□□ 0.95
SMARCAL1-205ENST00000425815 HOXC8P31273 242 aa20.98■□□□□ 0.95
SMARCAL1-205ENST00000425815 MTMR1Q13613 665 aa20.98■□□□□ 0.95
SMARCAL1-205ENST00000425815 TRIM71Q2Q1W2 868 aaKnown RBP20.98■□□□□ 0.95
SMARCAL1-205ENST00000425815 JAKMIP3Q5VZ66 844 aa20.98■□□□□ 0.95
SMARCAL1-205ENST00000425815 CRYGNQ8WXF5 182 aa20.98■□□□□ 0.95
SMARCAL1-205ENST00000425815 CDHR1Q96JP9 859 aa20.98■□□□□ 0.95
SMARCAL1-205ENST00000425815 SLC26A6Q9BXS9 759 aa20.98■□□□□ 0.95
SMARCAL1-205ENST00000425815 RNF26Q9BY78 433 aaPredicted RBP20.98■□□□□ 0.95
SMARCAL1-205ENST00000425815 GLT8D2Q9H1C3 349 aa20.98■□□□□ 0.95
SMARCAL1-205ENST00000425815 SEMA6BQ9H3T3 888 aa20.98■□□□□ 0.95
SMARCAL1-205ENST00000425815 NOD1Q9Y239 953 aa20.98■□□□□ 0.95
SMARCAL1-205ENST00000425815 GSTTP1A0A1W2PQM5 241 aa20.97■□□□□ 0.95
SMARCAL1-205ENST00000425815 NOP56O00567 594 aaKnown RBP20.97■□□□□ 0.95
SMARCAL1-205ENST00000425815 MAFGO15525 162 aa20.97■□□□□ 0.95
SMARCAL1-205ENST00000425815 SREBF1P36956 1147 aa20.97■□□□□ 0.95
SMARCAL1-205ENST00000425815 SP4Q02446 784 aa20.97■□□□□ 0.95
SMARCAL1-205ENST00000425815 RBL2Q08999 1139 aa20.97■□□□□ 0.95
SMARCAL1-205ENST00000425815 AP3B2Q13367 1082 aa20.97■□□□□ 0.95
SMARCAL1-205ENST00000425815 BFSP2Q13515 415 aa20.97■□□□□ 0.95
SMARCAL1-205ENST00000425815 TRAF7Q6Q0C0 670 aa20.97■□□□□ 0.95
SMARCAL1-205ENST00000425815 DEFB128Q7Z7B8 93 aa20.97■□□□□ 0.95
SMARCAL1-205ENST00000425815 TRIM50Q86XT4 487 aa20.97■□□□□ 0.95
SMARCAL1-205ENST00000425815 RETREG2Q8NC44 543 aa20.97■□□□□ 0.95
SMARCAL1-205ENST00000425815 IL17RAQ96F46 866 aa20.97■□□□□ 0.95
SMARCAL1-205ENST00000425815 FAM161BQ96MY7 647 aa20.97■□□□□ 0.95
SMARCAL1-205ENST00000425815 GUCD1Q96NT3 240 aa20.97■□□□□ 0.95
SMARCAL1-205ENST00000425815 KCNH7Q9NS40 1196 aa20.97■□□□□ 0.95
SMARCAL1-205ENST00000425815 PKD2L1Q9P0L9 805 aa20.97■□□□□ 0.95
SMARCAL1-205ENST00000425815 MEIS1O00470 390 aa20.96■□□□□ 0.95
SMARCAL1-205ENST00000425815 SMIM10L2AP0DMW4 78 aa20.96■□□□□ 0.95
SMARCAL1-205ENST00000425815 SMIM10L2BP0DMW5 78 aa20.96■□□□□ 0.95
SMARCAL1-205ENST00000425815 PBX2P40425 430 aa20.96■□□□□ 0.95
SMARCAL1-205ENST00000425815 PTK7Q13308 1070 aa20.96■□□□□ 0.95
SMARCAL1-205ENST00000425815 UTP14CQ5TAP6 766 aaKnown RBP20.96■□□□□ 0.95
SMARCAL1-205ENST00000425815 GIMAP8Q8ND71 665 aaPredicted RBP20.96■□□□□ 0.95
SMARCAL1-205ENST00000425815 CAGE1Q8TC20 777 aa20.96■□□□□ 0.95
SMARCAL1-205ENST00000425815 RNPEPQ9H4A4 650 aa20.96■□□□□ 0.95
SMARCAL1-205ENST00000425815 EHMT1Q9H9B1 1298 aa20.96■□□□□ 0.95
SMARCAL1-205ENST00000425815 EDIL3O43854 480 aa20.95■□□□□ 0.94
SMARCAL1-205ENST00000425815 CKBP12277 381 aa20.95■□□□□ 0.94
SMARCAL1-205ENST00000425815 RFC2P35250 354 aa20.95■□□□□ 0.94
SMARCAL1-205ENST00000425815 CEP55Q53EZ4 464 aa20.95■□□□□ 0.94
SMARCAL1-205ENST00000425815 SEPT1Q8WYJ6 367 aa20.95■□□□□ 0.94
SMARCAL1-205ENST00000425815 FAM86B1E9PN63 330 aa20.94■□□□□ 0.94
SMARCAL1-205ENST00000425815 PFKMP08237 780 aa20.94■□□□□ 0.94
SMARCAL1-205ENST00000425815 CYP3A4P08684 503 aa20.94■□□□□ 0.94
SMARCAL1-205ENST00000425815 FAM86B2P0C5J1 330 aa20.94■□□□□ 0.94
SMARCAL1-205ENST00000425815 SELPP16109 830 aa20.94■□□□□ 0.94
SMARCAL1-205ENST00000425815 TCF7P36402 384 aaPredicted RBP20.94■□□□□ 0.94
SMARCAL1-205ENST00000425815 ANAPC15P60006 121 aa20.94■□□□□ 0.94
SMARCAL1-205ENST00000425815 ADAM17P78536 824 aa20.94■□□□□ 0.94
SMARCAL1-205ENST00000425815 ARHGAP4P98171 946 aa20.94■□□□□ 0.94
SMARCAL1-205ENST00000425815 AKAP17AQ02040 695 aaKnown RBP20.94■□□□□ 0.94
SMARCAL1-205ENST00000425815 STK3Q13188 491 aa20.94■□□□□ 0.94
SMARCAL1-205ENST00000425815 ITGB3BPQ13352 177 aaPredicted RBP20.94■□□□□ 0.94
SMARCAL1-205ENST00000425815 ZNF697Q5TEC3 545 aa20.94■□□□□ 0.94
SMARCAL1-205ENST00000425815 AFAP1L1Q8TED9 768 aa20.94■□□□□ 0.94
SMARCAL1-205ENST00000425815 PBX4Q9BYU1 374 aa20.94■□□□□ 0.94
SMARCAL1-205ENST00000425815 AGO4Q9HCK5 861 aaKnown RBP20.94■□□□□ 0.94
SMARCAL1-205ENST00000425815 C6orf50Q9HD87 102 aa20.94■□□□□ 0.94
SMARCAL1-205ENST00000425815 VPS54Q9P1Q0 977 aa20.94■□□□□ 0.94
SMARCAL1-205ENST00000425815 TPCN1Q9ULQ1 816 aa20.94■□□□□ 0.94
SMARCAL1-205ENST00000425815 COL6A3P12111 3177 aa20.93■□□□□ 0.94
SMARCAL1-205ENST00000425815 C17orf102A2RUQ5 167 aa20.93■□□□□ 0.94
SMARCAL1-205ENST00000425815 TREHO43280 583 aa20.93■□□□□ 0.94
SMARCAL1-205ENST00000425815 NBNO60934 754 aa20.93■□□□□ 0.94
SMARCAL1-205ENST00000425815 DNAJB2P25686 324 aa20.93■□□□□ 0.94
SMARCAL1-205ENST00000425815 ZNF618Q5T7W0 954 aa20.93■□□□□ 0.94
SMARCAL1-205ENST00000425815 LRRC8DQ7L1W4 858 aa20.93■□□□□ 0.94
SMARCAL1-205ENST00000425815 SERINC5Q86VE9 423 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms