RNA–Protein interactions for RNA: ENST00000424017.1

AP000235.1-201, humanhuman

TSL 3 BASIC

Gene AP000235.1, Length 479 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000235.1-201ENST00000424017 SMAD2Q15796 467 aaKnown RBP3.48□□□□□ -1.85
AP000235.1-201ENST00000424017 GTF2IRD2BQ6EKJ0 949 aa3.48□□□□□ -1.85
AP000235.1-201ENST00000424017 GTF2IRD2Q86UP8 949 aa3.48□□□□□ -1.85
AP000235.1-201ENST00000424017 AMER2Q8N7J2 671 aa3.48□□□□□ -1.85
AP000235.1-201ENST00000424017 FAM89AQ96GI7 184 aa3.48□□□□□ -1.85
AP000235.1-201ENST00000424017 CLDND1Q9NY35 253 aa3.48□□□□□ -1.85
AP000235.1-201ENST00000424017 MYOTQ9UBF9 498 aa3.48□□□□□ -1.85
AP000235.1-201ENST00000424017 APEX2Q9UBZ4 518 aa3.48□□□□□ -1.85
AP000235.1-201ENST00000424017 PCDHA2Q9Y5H9 948 aa3.48□□□□□ -1.85
AP000235.1-201ENST00000424017 A0A1W2PQH9 124 aa3.47□□□□□ -1.85
AP000235.1-201ENST00000424017 KRIT1O00522 736 aa3.47□□□□□ -1.85
AP000235.1-201ENST00000424017 KCNJ6P48051 423 aa3.47□□□□□ -1.85
AP000235.1-201ENST00000424017 GLRBP48167 497 aa3.47□□□□□ -1.85
AP000235.1-201ENST00000424017 RAC3P60763 192 aa3.47□□□□□ -1.85
AP000235.1-201ENST00000424017 KCNAB2Q13303 367 aa3.47□□□□□ -1.85
AP000235.1-201ENST00000424017 LSAMPQ13449 338 aa3.47□□□□□ -1.85
AP000235.1-201ENST00000424017 COL9A2Q14055 689 aaPredicted RBP3.47□□□□□ -1.85
AP000235.1-201ENST00000424017 ZNF394Q53GI3 561 aa3.47□□□□□ -1.85
AP000235.1-201ENST00000424017 AGBL4Q5VU57 503 aa3.47□□□□□ -1.85
AP000235.1-201ENST00000424017 E4F1Q66K89 784 aaPredicted RBP3.47□□□□□ -1.85
AP000235.1-201ENST00000424017 DPY19L2P1Q6NXN4 242 aa3.47□□□□□ -1.85
AP000235.1-201ENST00000424017 VHLLQ6RSH7 139 aa3.47□□□□□ -1.85
AP000235.1-201ENST00000424017 TRIM48Q8IWZ4 208 aa3.47□□□□□ -1.85
AP000235.1-201ENST00000424017 C19orf47Q8N9M1 422 aaKnown RBP3.47□□□□□ -1.85
AP000235.1-201ENST00000424017 OR6P1Q8NGX9 317 aa3.47□□□□□ -1.85
AP000235.1-201ENST00000424017 GIPC2Q8TF65 315 aa3.47□□□□□ -1.85
AP000235.1-201ENST00000424017 FRS2Q8WU20 508 aa3.47□□□□□ -1.85
AP000235.1-201ENST00000424017 CPLX3Q8WVH0 158 aa3.47□□□□□ -1.85
AP000235.1-201ENST00000424017 KLHL6Q8WZ60 621 aa3.47□□□□□ -1.85
AP000235.1-201ENST00000424017 EDAQ92838 391 aa3.47□□□□□ -1.85
AP000235.1-201ENST00000424017 NEIL1Q96FI4 390 aaPredicted RBP3.47□□□□□ -1.85
AP000235.1-201ENST00000424017 LRP2BPQ9P2M1 347 aa3.47□□□□□ -1.85
AP000235.1-201ENST00000424017 RBPJLQ9UBG7 517 aa3.47□□□□□ -1.85
AP000235.1-201ENST00000424017 REXO2Q9Y3B8 237 aaKnown RBP3.47□□□□□ -1.85
AP000235.1-201ENST00000424017 PCDHGB7Q9Y5F8 929 aa3.47□□□□□ -1.85
AP000235.1-201ENST00000424017 SLC4A7Q9Y6M7 1214 aa3.47□□□□□ -1.85
AP000235.1-201ENST00000424017 H7BY64 318 aa3.46□□□□□ -1.86
AP000235.1-201ENST00000424017 SNRPB2P08579 225 aaKnown RBP3.46□□□□□ -1.86
AP000235.1-201ENST00000424017 GRIN1Q05586 938 aa3.46□□□□□ -1.86
AP000235.1-201ENST00000424017 USP10Q14694 798 aaKnown RBP3.46□□□□□ -1.86
AP000235.1-201ENST00000424017 CCDC27Q2M243 656 aa3.46□□□□□ -1.86
AP000235.1-201ENST00000424017 FUKQ8N0W3 1084 aa3.46□□□□□ -1.86
AP000235.1-201ENST00000424017 NPLOC4Q8TAT6 608 aa3.46□□□□□ -1.86
AP000235.1-201ENST00000424017 PHOSPHO1Q8TCT1 267 aa3.46□□□□□ -1.86
AP000235.1-201ENST00000424017 OR14A2Q96R54 314 aa3.46□□□□□ -1.86
AP000235.1-201ENST00000424017 NKX2-4Q9H2Z4 354 aa3.46□□□□□ -1.86
AP000235.1-201ENST00000424017 C12orf65Q9H3J6 166 aaKnown RBP3.46□□□□□ -1.86
AP000235.1-201ENST00000424017 SMOC1Q9H4F8 434 aa3.46□□□□□ -1.86
AP000235.1-201ENST00000424017 EPB41L1Q9H4G0 881 aa3.46□□□□□ -1.86
AP000235.1-201ENST00000424017 DLL4Q9NR61 685 aa3.46□□□□□ -1.86
AP000235.1-201ENST00000424017 GINM1Q9NU53 330 aa3.46□□□□□ -1.86
AP000235.1-201ENST00000424017 EFR3BQ9Y2G0 817 aa3.46□□□□□ -1.86
AP000235.1-201ENST00000424017 H0Y858 1186 aa3.45□□□□□ -1.86
AP000235.1-201ENST00000424017 CDC14BO60729 498 aa3.45□□□□□ -1.86
AP000235.1-201ENST00000424017 TADA3O75528 432 aa3.45□□□□□ -1.86
AP000235.1-201ENST00000424017 KLHL18O94889 574 aa3.45□□□□□ -1.86
AP000235.1-201ENST00000424017 CHGBP05060 677 aa3.45□□□□□ -1.86
AP000235.1-201ENST00000424017 C1SP09871 688 aa3.45□□□□□ -1.86
AP000235.1-201ENST00000424017 MAKP20794 623 aa3.45□□□□□ -1.86
AP000235.1-201ENST00000424017 TUBA3CQ13748 450 aa3.45□□□□□ -1.86
AP000235.1-201ENST00000424017 MRPL58Q14197 206 aaKnown RBP3.45□□□□□ -1.86
AP000235.1-201ENST00000424017 TUBA3EQ6PEY2 450 aa3.45□□□□□ -1.86
AP000235.1-201ENST00000424017 POLNQ7Z5Q5 900 aa3.45□□□□□ -1.86
AP000235.1-201ENST00000424017 MRGPRGQ86SM5 289 aa3.45□□□□□ -1.86
AP000235.1-201ENST00000424017 NLRP10Q86W26 655 aa3.45□□□□□ -1.86
AP000235.1-201ENST00000424017 TRIM59Q8IWR1 403 aa3.45□□□□□ -1.86
AP000235.1-201ENST00000424017 STPG3Q8N7X2 389 aa3.45□□□□□ -1.86
AP000235.1-201ENST00000424017 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.45□□□□□ -1.86
AP000235.1-201ENST00000424017 ARHGAP20Q9P2F6 1191 aa3.45□□□□□ -1.86
AP000235.1-201ENST00000424017 ZFP69BQ9UJL9 534 aa3.45□□□□□ -1.86
AP000235.1-201ENST00000424017 RAMP2O60895 175 aa3.44□□□□□ -1.86
AP000235.1-201ENST00000424017 RAD17O75943 681 aa3.44□□□□□ -1.86
AP000235.1-201ENST00000424017 CKMP06732 381 aa3.44□□□□□ -1.86
AP000235.1-201ENST00000424017 CR2P20023 1033 aa3.44□□□□□ -1.86
AP000235.1-201ENST00000424017 HOXC12P31275 282 aa3.44□□□□□ -1.86
AP000235.1-201ENST00000424017 CSF2RBP32927 897 aa3.44□□□□□ -1.86
AP000235.1-201ENST00000424017 LTBRP36941 435 aa3.44□□□□□ -1.86
AP000235.1-201ENST00000424017 GIPRP48546 466 aa3.44□□□□□ -1.86
AP000235.1-201ENST00000424017 HHEXQ03014 270 aa3.44□□□□□ -1.86
AP000235.1-201ENST00000424017 SKIDA1Q1XH10 827 aa3.44□□□□□ -1.86
AP000235.1-201ENST00000424017 REXO1L1PQ8IX06 675 aa3.44□□□□□ -1.86
AP000235.1-201ENST00000424017 PPIL6Q8IXY8 311 aa3.44□□□□□ -1.86
AP000235.1-201ENST00000424017 Q8N1Y9 231 aa3.44□□□□□ -1.86
AP000235.1-201ENST00000424017 RCBTB1Q8NDN9 531 aa3.44□□□□□ -1.86
AP000235.1-201ENST00000424017 ZNF483Q8TF39 744 aaPredicted RBP3.44□□□□□ -1.86
AP000235.1-201ENST00000424017 BTN2A2Q8WVV5 523 aa3.44□□□□□ -1.86
AP000235.1-201ENST00000424017 AJUBAQ96IF1 538 aa3.44□□□□□ -1.86
AP000235.1-201ENST00000424017 SPATA32Q96LK8 384 aa3.44□□□□□ -1.86
AP000235.1-201ENST00000424017 LGR4Q9BXB1 951 aa3.44□□□□□ -1.86
AP000235.1-201ENST00000424017 CARD11Q9BXL7 1154 aa3.44□□□□□ -1.86
AP000235.1-201ENST00000424017 MMRN2Q9H8L6 949 aa3.44□□□□□ -1.86
AP000235.1-201ENST00000424017 WASF3Q9UPY6 502 aa3.44□□□□□ -1.86
AP000235.1-201ENST00000424017 NACADO15069 1562 aa3.43□□□□□ -1.86
AP000235.1-201ENST00000424017 CUX2O14529 1486 aa3.43□□□□□ -1.86
AP000235.1-201ENST00000424017 SHROOM4Q9ULL8 1493 aa3.43□□□□□ -1.86
AP000235.1-201ENST00000424017 SLC27A2O14975 620 aa3.43□□□□□ -1.86
AP000235.1-201ENST00000424017 CPP00450 1065 aa3.43□□□□□ -1.86
AP000235.1-201ENST00000424017 KNG1P01042 644 aa3.43□□□□□ -1.86
AP000235.1-201ENST00000424017 ENO2P09104 434 aaPredicted RBP3.43□□□□□ -1.86
AP000235.1-201ENST00000424017 COL6A1P12109 1028 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms