RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 TRIM29Q14134 588 aa21■□□□□ 0.95
HDAC6-205ENST00000423941 DGKDQ16760 1214 aa21■□□□□ 0.95
HDAC6-205ENST00000423941 PLA2G4DQ86XP0 818 aa21■□□□□ 0.95
HDAC6-205ENST00000423941 DIS3L2Q8IYB7 885 aaKnown RBP21■□□□□ 0.95
HDAC6-205ENST00000423941 FAM184AQ8NB25 1140 aa21■□□□□ 0.95
HDAC6-205ENST00000423941 SEZ6LQ9BYH1 1024 aa21■□□□□ 0.95
HDAC6-205ENST00000423941 STARD7Q9NQZ5 370 aa21■□□□□ 0.95
HDAC6-205ENST00000423941 ZSCAN21Q9Y5A6 473 aaPredicted RBP21■□□□□ 0.95
HDAC6-205ENST00000423941 CCDC194A0A1B0GVG4 234 aa20.99■□□□□ 0.95
HDAC6-205ENST00000423941 SETQ01105 290 aaPredicted RBP20.99■□□□□ 0.95
HDAC6-205ENST00000423941 ITGB3BPQ13352 177 aaPredicted RBP20.99■□□□□ 0.95
HDAC6-205ENST00000423941 INF2Q27J81 1249 aa20.99■□□□□ 0.95
HDAC6-205ENST00000423941 Q4G0T1 1027 aa20.99■□□□□ 0.95
HDAC6-205ENST00000423941 ANKRD33Q7Z3H0 272 aa20.99■□□□□ 0.95
HDAC6-205ENST00000423941 KAT2BQ92831 832 aa20.99■□□□□ 0.95
HDAC6-205ENST00000423941 INTS4Q96HW7 963 aaKnown RBP20.99■□□□□ 0.95
HDAC6-205ENST00000423941 TOX2Q96NM4 488 aa20.99■□□□□ 0.95
HDAC6-205ENST00000423941 GPR20Q99678 358 aa20.99■□□□□ 0.95
HDAC6-205ENST00000423941 MTG1Q9BT17 334 aaPredicted RBP20.99■□□□□ 0.95
HDAC6-205ENST00000423941 BRMS1Q9HCU9 246 aa20.99■□□□□ 0.95
HDAC6-205ENST00000423941 TELO2Q9Y4R8 837 aa20.99■□□□□ 0.95
HDAC6-205ENST00000423941 PDE4DIPQ5VU43 2346 aa20.99■□□□□ 0.95
HDAC6-205ENST00000423941 K7ELQ4 463 aaPredicted RBP20.98■□□□□ 0.95
HDAC6-205ENST00000423941 ARVCFO00192 962 aa20.98■□□□□ 0.95
HDAC6-205ENST00000423941 HAS3O00219 553 aa20.98■□□□□ 0.95
HDAC6-205ENST00000423941 GJB2P29033 226 aa20.98■□□□□ 0.95
HDAC6-205ENST00000423941 ATN1P54259 1190 aaPredicted RBP20.98■□□□□ 0.95
HDAC6-205ENST00000423941 ITGA7Q13683 1181 aa20.98■□□□□ 0.95
HDAC6-205ENST00000423941 PPP4R3AQ6IN85 833 aa20.98■□□□□ 0.95
HDAC6-205ENST00000423941 NEK8Q86SG6 692 aa20.98■□□□□ 0.95
HDAC6-205ENST00000423941 C16orf70Q9BSU1 422 aa20.98■□□□□ 0.95
HDAC6-205ENST00000423941 FOXP1Q9H334 677 aaPredicted RBP20.98■□□□□ 0.95
HDAC6-205ENST00000423941 KIF3AQ9Y496 699 aa20.98■□□□□ 0.95
HDAC6-205ENST00000423941 A0A0U1RQG5 324 aaPredicted RBP20.97■□□□□ 0.95
HDAC6-205ENST00000423941 GSTTP1A0A1W2PQM5 241 aa20.97■□□□□ 0.95
HDAC6-205ENST00000423941 IPO5O00410 1097 aaKnown RBP20.97■□□□□ 0.95
HDAC6-205ENST00000423941 ATG7O95352 703 aa20.97■□□□□ 0.95
HDAC6-205ENST00000423941 F2P00734 622 aa20.97■□□□□ 0.95
HDAC6-205ENST00000423941 MYL3P08590 195 aa20.97■□□□□ 0.95
HDAC6-205ENST00000423941 U2AF2P26368 475 aaKnown RBP eCLIP20.97■□□□□ 0.95
HDAC6-205ENST00000423941 RTP1P59025 263 aa20.97■□□□□ 0.95
HDAC6-205ENST00000423941 GUCY1B3Q02153 619 aa20.97■□□□□ 0.95
HDAC6-205ENST00000423941 PRR16Q569H4 304 aa20.97■□□□□ 0.95
HDAC6-205ENST00000423941 PIK3AP1Q6ZUJ8 805 aa20.97■□□□□ 0.95
HDAC6-205ENST00000423941 FAM205CA6NFA0 338 aa20.96■□□□□ 0.95
HDAC6-205ENST00000423941 EVI5O60447 810 aa20.96■□□□□ 0.95
HDAC6-205ENST00000423941 SORBS3O60504 671 aa20.96■□□□□ 0.95
HDAC6-205ENST00000423941 TDP2O95551 362 aa20.96■□□□□ 0.95
HDAC6-205ENST00000423941 GCFC2P16383 781 aaKnown RBP20.96■□□□□ 0.95
HDAC6-205ENST00000423941 SEPT1Q8WYJ6 367 aa20.96■□□□□ 0.95
HDAC6-205ENST00000423941 DPF3Q92784 378 aa20.96■□□□□ 0.95
HDAC6-205ENST00000423941 SMC3Q9UQE7 1217 aa20.96■□□□□ 0.95
HDAC6-205ENST00000423941 WDR81Q562E7 1941 aa20.96■□□□□ 0.95
HDAC6-205ENST00000423941 MSH4O15457 936 aa20.95■□□□□ 0.94
HDAC6-205ENST00000423941 CD4P01730 458 aa20.95■□□□□ 0.94
HDAC6-205ENST00000423941 FOSBP53539 338 aa20.95■□□□□ 0.94
HDAC6-205ENST00000423941 PSMC6P62333 389 aa20.95■□□□□ 0.94
HDAC6-205ENST00000423941 TLE2Q04725 743 aa20.95■□□□□ 0.94
HDAC6-205ENST00000423941 SAFBQ15424 915 aaKnown RBP eCLIP20.95■□□□□ 0.94
HDAC6-205ENST00000423941 TRIM60Q495X7 471 aa20.95■□□□□ 0.94
HDAC6-205ENST00000423941 SESTD1Q86VW0 696 aa20.95■□□□□ 0.94
HDAC6-205ENST00000423941 SLC5A5Q92911 643 aa20.95■□□□□ 0.94
HDAC6-205ENST00000423941 JPH1Q9HDC5 661 aaPredicted RBP20.95■□□□□ 0.94
HDAC6-205ENST00000423941 TBC1D22BQ9NU19 505 aa20.95■□□□□ 0.94
HDAC6-205ENST00000423941 SLC9A2Q9UBY0 812 aa20.95■□□□□ 0.94
HDAC6-205ENST00000423941 PTPN11Q06124 597 aaPredicted RBP20.94■□□□□ 0.94
HDAC6-205ENST00000423941 NBPF20Q3BBV1 942 aa20.94■□□□□ 0.94
HDAC6-205ENST00000423941 NFRKBQ6P4R8 1299 aa20.94■□□□□ 0.94
HDAC6-205ENST00000423941 B3GNT9Q6UX72 402 aa20.94■□□□□ 0.94
HDAC6-205ENST00000423941 FAM126BQ8IXS8 530 aa20.94■□□□□ 0.94
HDAC6-205ENST00000423941 ETNPPLQ8TBG4 499 aa20.94■□□□□ 0.94
HDAC6-205ENST00000423941 VTI1AQ96AJ9 217 aa20.94■□□□□ 0.94
HDAC6-205ENST00000423941 RIT2Q99578 217 aa20.94■□□□□ 0.94
HDAC6-205ENST00000423941 NAP1L4Q99733 375 aaKnown RBP20.94■□□□□ 0.94
HDAC6-205ENST00000423941 SDF4Q9BRK5 362 aa20.94■□□□□ 0.94
HDAC6-205ENST00000423941 ZNF577Q9BSK1 485 aa20.94■□□□□ 0.94
HDAC6-205ENST00000423941 MROH7Q68CQ1 1323 aa20.94■□□□□ 0.94
HDAC6-205ENST00000423941 IGKV6D-21A0A0A0MT36 114 aa20.93■□□□□ 0.94
HDAC6-205ENST00000423941 NOP56O00567 594 aaKnown RBP20.93■□□□□ 0.94
HDAC6-205ENST00000423941 LGR5O75473 907 aa20.93■□□□□ 0.94
HDAC6-205ENST00000423941 PSMD10O75832 226 aa20.93■□□□□ 0.94
HDAC6-205ENST00000423941 CCNE2O96020 404 aa20.93■□□□□ 0.94
HDAC6-205ENST00000423941 LGALS2P05162 132 aa20.93■□□□□ 0.94
HDAC6-205ENST00000423941 FAAP100Q0VG06 881 aa20.93■□□□□ 0.94
HDAC6-205ENST00000423941 LETM2Q2VYF4 491 aa20.93■□□□□ 0.94
HDAC6-205ENST00000423941 KCNMB3Q9NPA1 279 aa20.93■□□□□ 0.94
HDAC6-205ENST00000423941 PKD2L1Q9P0L9 805 aa20.93■□□□□ 0.94
HDAC6-205ENST00000423941 NR2E3Q9Y5X4 410 aa20.93■□□□□ 0.94
HDAC6-205ENST00000423941 KIF28PB7ZC32 967 aa20.92■□□□□ 0.94
HDAC6-205ENST00000423941 H3BRB1 525 aa20.92■□□□□ 0.94
HDAC6-205ENST00000423941 WNT7AO00755 349 aa20.92■□□□□ 0.94
HDAC6-205ENST00000423941 TBX3O15119 743 aa20.92■□□□□ 0.94
HDAC6-205ENST00000423941 SLC37A4O43826 429 aa20.92■□□□□ 0.94
HDAC6-205ENST00000423941 TCF7P36402 384 aaPredicted RBP20.92■□□□□ 0.94
HDAC6-205ENST00000423941 ACTR2P61160 394 aa20.92■□□□□ 0.94
HDAC6-205ENST00000423941 ABHD15Q6UXT9 468 aa20.92■□□□□ 0.94
HDAC6-205ENST00000423941 NOSTRINQ8IVI9 506 aa20.92■□□□□ 0.94
HDAC6-205ENST00000423941 PCYT2Q99447 389 aa20.92■□□□□ 0.94
HDAC6-205ENST00000423941 KATNAL1Q9BW62 490 aa20.92■□□□□ 0.94
HDAC6-205ENST00000423941 TUT1Q9H6E5 874 aaKnown RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms