RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 USTQ9Y2C2 406 aa7.45□□□□□ -1.22
CNOT4-205ENST00000423368 A8MU76 341 aa7.45□□□□□ -1.22
CNOT4-205ENST00000423368 ATP9BO43861 1147 aa7.45□□□□□ -1.22
CNOT4-205ENST00000423368 HSPA8P11142 646 aaKnown RBP7.45□□□□□ -1.22
CNOT4-205ENST00000423368 ENDOUP21128 410 aaKnown RBP7.45□□□□□ -1.22
CNOT4-205ENST00000423368 NEK3P51956 506 aa7.45□□□□□ -1.22
CNOT4-205ENST00000423368 TNIP1Q15025 636 aa7.45□□□□□ -1.22
CNOT4-205ENST00000423368 IFI16Q16666 785 aaKnown RBP7.45□□□□□ -1.22
CNOT4-205ENST00000423368 METTL16Q86W50 562 aaKnown RBP7.45□□□□□ -1.22
CNOT4-205ENST00000423368 PEX5LQ8IYB4 626 aa7.45□□□□□ -1.22
CNOT4-205ENST00000423368 MYOCDQ8IZQ8 938 aa7.45□□□□□ -1.22
CNOT4-205ENST00000423368 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.45□□□□□ -1.22
CNOT4-205ENST00000423368 MTMR14Q8NCE2 650 aa7.45□□□□□ -1.22
CNOT4-205ENST00000423368 RUFY2Q8WXA3 655 aa7.45□□□□□ -1.22
CNOT4-205ENST00000423368 SPATA16Q9BXB7 569 aa7.45□□□□□ -1.22
CNOT4-205ENST00000423368 CCDC8Q9H0W5 538 aaPredicted RBP7.45□□□□□ -1.22
CNOT4-205ENST00000423368 DPH5Q9H2P9 285 aa7.45□□□□□ -1.22
CNOT4-205ENST00000423368 NLRC4Q9NPP4 1024 aa7.45□□□□□ -1.22
CNOT4-205ENST00000423368 EURLQ9NYK6 297 aa7.45□□□□□ -1.22
CNOT4-205ENST00000423368 RNF14Q9UBS8 474 aa7.45□□□□□ -1.22
CNOT4-205ENST00000423368 HAO1Q9UJM8 370 aa7.45□□□□□ -1.22
CNOT4-205ENST00000423368 TRIM17Q9Y577 477 aa7.45□□□□□ -1.22
CNOT4-205ENST00000423368 ATP10DQ9P241 1426 aa7.45□□□□□ -1.22
CNOT4-205ENST00000423368 FGD5Q6ZNL6 1462 aa7.45□□□□□ -1.22
CNOT4-205ENST00000423368 MAGI3Q5TCQ9 1506 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 UHRF1BP1LA0JNW5 1464 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 A0A0D9SFI3 127 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 TXNDC9O14530 226 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 FOXD2O60548 495 aaPredicted RBP7.44□□□□□ -1.22
CNOT4-205ENST00000423368 TROVE2P10155 538 aaKnown RBP eCLIP7.44□□□□□ -1.22
CNOT4-205ENST00000423368 EPHB2P29323 1055 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 ARFIP2P53365 341 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 ITIH3Q06033 890 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 TUBB2AQ13885 445 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 IQCEQ6IPM2 695 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 TMC4Q7Z404 712 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 ZNF589Q86UQ0 364 aaPredicted RBP7.44□□□□□ -1.22
CNOT4-205ENST00000423368 NUTM2AQ8IVF1 878 aaPredicted RBP7.44□□□□□ -1.22
CNOT4-205ENST00000423368 MKL1Q969V6 931 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 RMDN2Q96LZ7 410 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 TUBGCP5Q96RT8 1024 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 CCT7Q99832 543 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 TUBB2BQ9BVA1 445 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 ABHD10Q9NUJ1 306 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 BTBD7Q9P203 1132 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 SEL1LQ9UBV2 794 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 SEC63Q9UGP8 760 aaKnown RBP7.44□□□□□ -1.22
CNOT4-205ENST00000423368 SLC12A4Q9UP95 1085 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 CAPN6Q9Y6Q1 641 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 C9orf84Q5VXU9 1444 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 CPLX1O14810 134 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 POLR2DO15514 142 aaKnown RBP7.44□□□□□ -1.22
CNOT4-205ENST00000423368 TBC1D12O60347 775 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 EPB41P11171 864 aaKnown RBP7.44□□□□□ -1.22
CNOT4-205ENST00000423368 CALB2P22676 271 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 HSD17B3P37058 310 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 RIPK1Q13546 671 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 PRKG1Q13976 671 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 SH2D4BQ5SQS7 431 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 SATL1Q86VE3 508 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 CNGA4Q8IV77 575 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 IFT20Q8IY31 132 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 GABPB2Q8TAK5 448 aaPredicted RBP7.44□□□□□ -1.22
CNOT4-205ENST00000423368 LRRC8CQ8TDW0 803 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 GFM2Q969S9 779 aaKnown RBP7.44□□□□□ -1.22
CNOT4-205ENST00000423368 LRWD1Q9UFC0 647 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 SLC12A6Q9UHW9 1150 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 FAF1Q9UNN5 650 aaPredicted RBP7.44□□□□□ -1.22
CNOT4-205ENST00000423368 SHANK2Q9UPX8 1470 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 CFAP73A6NFT4 308 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 KRT86O43790 486 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 TJP3O95049 919 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 LCA5LO95447 670 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 BAG2O95816 211 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 POTEIP0CG38 1075 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 KCNA2P16389 499 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 PMS2P54278 862 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 COPS2P61201 443 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 UBXN1Q04323 297 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 NR1I3Q14994 352 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 NECTIN1Q15223 517 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 SNX30Q5VWJ9 437 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 NEK10Q6ZWH5 1172 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 HS2ST1Q7LGA3 356 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 MED15Q96RN5 788 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 RNPEPL1Q9HAU8 725 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 INTS9Q9NV88 658 aaKnown RBP7.44□□□□□ -1.22
CNOT4-205ENST00000423368 TLR7Q9NYK1 1049 aaKnown RBP7.44□□□□□ -1.22
CNOT4-205ENST00000423368 VPS51Q9UID3 782 aa7.44□□□□□ -1.22
CNOT4-205ENST00000423368 CDK13Q14004 1512 aaKnown RBP7.43□□□□□ -1.22
CNOT4-205ENST00000423368 NEDD4P46934 1319 aa7.43□□□□□ -1.22
CNOT4-205ENST00000423368 ASLP04424 464 aa7.43□□□□□ -1.22
CNOT4-205ENST00000423368 TPBGLP0DKB5 382 aa7.43□□□□□ -1.22
CNOT4-205ENST00000423368 SKIP12755 728 aa7.43□□□□□ -1.22
CNOT4-205ENST00000423368 HPCAP84074 193 aa7.43□□□□□ -1.22
CNOT4-205ENST00000423368 PTGDRQ13258 359 aa7.43□□□□□ -1.22
CNOT4-205ENST00000423368 UBE4AQ14139 1066 aa7.43□□□□□ -1.22
CNOT4-205ENST00000423368 LBRQ14739 615 aaKnown RBP7.43□□□□□ -1.22
CNOT4-205ENST00000423368 SYDE2Q5VT97 1194 aa7.43□□□□□ -1.22
CNOT4-205ENST00000423368 PPP1R42Q7Z4L9 355 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms