RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 MFSD5Q6N075 450 aa30.15■■■□□ 2.42
CDK9-202ENST00000421939 SESTD1Q86VW0 696 aa30.15■■■□□ 2.42
CDK9-202ENST00000421939 MAFGO15525 162 aa30.14■■■□□ 2.42
CDK9-202ENST00000421939 ATP9AO75110 1047 aa30.14■■■□□ 2.42
CDK9-202ENST00000421939 CEP55Q53EZ4 464 aa30.14■■■□□ 2.42
CDK9-202ENST00000421939 GPR20Q99678 358 aa30.14■■■□□ 2.42
CDK9-202ENST00000421939 NOC4LQ9BVI4 516 aaKnown RBP30.14■■■□□ 2.42
CDK9-202ENST00000421939 HAS3O00219 553 aa30.13■■■□□ 2.41
CDK9-202ENST00000421939 CYP2C18P33260 490 aa30.13■■■□□ 2.41
CDK9-202ENST00000421939 SP4Q02446 784 aa30.13■■■□□ 2.41
CDK9-202ENST00000421939 KIAA0753Q2KHM9 967 aa30.13■■■□□ 2.41
CDK9-202ENST00000421939 CYP2W1Q8TAV3 490 aa30.13■■■□□ 2.41
CDK9-202ENST00000421939 PKD2L1Q9P0L9 805 aa30.13■■■□□ 2.41
CDK9-202ENST00000421939 STK36Q9NRP7 1315 aa30.13■■■□□ 2.41
CDK9-202ENST00000421939 LGALS2P05162 132 aa30.12■■■□□ 2.41
CDK9-202ENST00000421939 CYP2C9P11712 490 aa30.12■■■□□ 2.41
CDK9-202ENST00000421939 NLRP5P59047 1200 aa30.12■■■□□ 2.41
CDK9-202ENST00000421939 FAM177A1Q8N128 213 aaPredicted RBP30.12■■■□□ 2.41
CDK9-202ENST00000421939 RASGRP4Q8TDF6 673 aa30.12■■■□□ 2.41
CDK9-202ENST00000421939 CRYGNQ8WXF5 182 aa30.12■■■□□ 2.41
CDK9-202ENST00000421939 C16orf70Q9BSU1 422 aa30.12■■■□□ 2.41
CDK9-202ENST00000421939 ALG1Q9BT22 464 aa30.12■■■□□ 2.41
CDK9-202ENST00000421939 KCNH7Q9NS40 1196 aa30.12■■■□□ 2.41
CDK9-202ENST00000421939 LARGE1O95461 756 aa30.11■■■□□ 2.41
CDK9-202ENST00000421939 EPHB4P54760 987 aa30.11■■■□□ 2.41
CDK9-202ENST00000421939 PPIGQ13427 754 aaKnown RBP eCLIP30.11■■■□□ 2.416e-10■■■■□ 21.3
CDK9-202ENST00000421939 ME3Q16798 604 aa30.11■■■□□ 2.41
CDK9-202ENST00000421939 TMEM199Q8N511 208 aa30.11■■■□□ 2.41
CDK9-202ENST00000421939 C7orf31Q8N865 590 aa30.11■■■□□ 2.41
CDK9-202ENST00000421939 GTF3C6Q969F1 213 aa30.11■■■□□ 2.41
CDK9-202ENST00000421939 NOD1Q9Y239 953 aa30.11■■■□□ 2.41
CDK9-202ENST00000421939 UMODL1Q5DID0 1318 aa30.11■■■□□ 2.41
CDK9-202ENST00000421939 ZNF76P36508 570 aa30.1■■■□□ 2.41
CDK9-202ENST00000421939 LRIT3Q3SXY7 679 aa30.1■■■□□ 2.41
CDK9-202ENST00000421939 C9orf50Q5SZB4 431 aa30.1■■■□□ 2.41
CDK9-202ENST00000421939 GDF6Q6KF10 455 aaPredicted RBP30.1■■■□□ 2.41
CDK9-202ENST00000421939 NECAB1Q8N987 351 aa30.1■■■□□ 2.41
CDK9-202ENST00000421939 AIFM3Q96NN9 605 aa30.1■■■□□ 2.41
CDK9-202ENST00000421939 C22orf23Q9BZE7 217 aa30.1■■■□□ 2.41
CDK9-202ENST00000421939 HDAC6Q9UBN7 1215 aa30.1■■■□□ 2.41
CDK9-202ENST00000421939 GTF2IRD1Q9UHL9 959 aa30.1■■■□□ 2.41
CDK9-202ENST00000421939 TELO2Q9Y4R8 837 aa30.1■■■□□ 2.41
CDK9-202ENST00000421939 LAMA2P24043 3122 aaKnown RBP30.1■■■□□ 2.41
CDK9-202ENST00000421939 MEIS1O00470 390 aa30.09■■■□□ 2.41
CDK9-202ENST00000421939 CYP3A4P08684 503 aa30.09■■■□□ 2.41
CDK9-202ENST00000421939 SHHQ15465 462 aa30.09■■■□□ 2.41
CDK9-202ENST00000421939 PTGISQ16647 500 aa30.09■■■□□ 2.41
CDK9-202ENST00000421939 NIPA1Q7RTP0 329 aa30.09■■■□□ 2.41
CDK9-202ENST00000421939 PCDHA4Q9UN74 947 aa30.09■■■□□ 2.41
CDK9-202ENST00000421939 H3BRB1 525 aa30.08■■■□□ 2.41
CDK9-202ENST00000421939 SOX1O00570 391 aaPredicted RBP30.08■■■□□ 2.41
CDK9-202ENST00000421939 CTDNEP1O95476 244 aa30.08■■■□□ 2.41
CDK9-202ENST00000421939 ARP10275 920 aa30.08■■■□□ 2.41
CDK9-202ENST00000421939 CSF2RAP15509 400 aa30.08■■■□□ 2.41
CDK9-202ENST00000421939 TRIM50Q86XT4 487 aa30.08■■■□□ 2.41
CDK9-202ENST00000421939 WNT8AQ9H1J5 351 aa30.08■■■□□ 2.41
CDK9-202ENST00000421939 TUT1Q9H6E5 874 aaKnown RBP30.08■■■□□ 2.41
CDK9-202ENST00000421939 JPH1Q9HDC5 661 aaPredicted RBP30.08■■■□□ 2.41
CDK9-202ENST00000421939 FAM86B1E9PN63 330 aa30.07■■■□□ 2.4
CDK9-202ENST00000421939 FAM86B2P0C5J1 330 aa30.07■■■□□ 2.4
CDK9-202ENST00000421939 CTAGE1Q96RT6 745 aa30.07■■■□□ 2.4
CDK9-202ENST00000421939 KIF2CQ99661 725 aa30.07■■■□□ 2.4
CDK9-202ENST00000421939 SDF4Q9BRK5 362 aa30.07■■■□□ 2.4
CDK9-202ENST00000421939 AGO4Q9HCK5 861 aaKnown RBP30.07■■■□□ 2.4
CDK9-202ENST00000421939 ZNF215Q9UL58 517 aaPredicted RBP30.07■■■□□ 2.4
CDK9-202ENST00000421939 SZT2Q5T011 3432 aa30.06■■■□□ 2.4
CDK9-202ENST00000421939 NFASCO94856 1347 aa30.06■■■□□ 2.4
CDK9-202ENST00000421939 TCF7P36402 384 aaPredicted RBP30.06■■■□□ 2.4
CDK9-202ENST00000421939 RBM25P49756 843 aaKnown RBP30.06■■■□□ 2.4
CDK9-202ENST00000421939 CCL23P55773 120 aa30.06■■■□□ 2.4
CDK9-202ENST00000421939 UTP14CQ5TAP6 766 aaKnown RBP30.06■■■□□ 2.4
CDK9-202ENST00000421939 GALNT17Q6IS24 598 aa30.06■■■□□ 2.4
CDK9-202ENST00000421939 PLA2G4DQ86XP0 818 aa30.06■■■□□ 2.4
CDK9-202ENST00000421939 DAGLBQ8NCG7 672 aa30.06■■■□□ 2.4
CDK9-202ENST00000421939 ORC3Q9UBD5 711 aaPredicted RBP30.06■■■□□ 2.4
CDK9-202ENST00000421939 DTNBO60941 627 aa30.05■■■□□ 2.4
CDK9-202ENST00000421939 ITGB3BPQ13352 177 aaPredicted RBP30.05■■■□□ 2.4
CDK9-202ENST00000421939 NPY5RQ15761 445 aa30.05■■■□□ 2.4
CDK9-202ENST00000421939 BLIDQ8IZY5 108 aa30.05■■■□□ 2.4
CDK9-202ENST00000421939 SEPT1Q8WYJ6 367 aa30.05■■■□□ 2.4
CDK9-202ENST00000421939 SLC9A2Q9UBY0 812 aa30.05■■■□□ 2.4
CDK9-202ENST00000421939 IGLV3-22A0A075B6J6 115 aa30.04■■■□□ 2.4
CDK9-202ENST00000421939 PITPNM1O00562 1244 aa30.04■■■□□ 2.4
CDK9-202ENST00000421939 SETQ01105 290 aaPredicted RBP30.04■■■□□ 2.4
CDK9-202ENST00000421939 BFSP2Q13515 415 aa30.04■■■□□ 2.4
CDK9-202ENST00000421939 LRCH3Q96II8 777 aa30.04■■■□□ 2.4
CDK9-202ENST00000421939 RNPC3Q96LT9 517 aaKnown RBP30.04■■■□□ 2.4
CDK9-202ENST00000421939 IL23AQ9NPF7 189 aa30.04■■■□□ 2.4
CDK9-202ENST00000421939 TANC1Q9C0D5 1861 aa30.04■■■□□ 2.4
CDK9-202ENST00000421939 GSTTP1A0A1W2PQM5 241 aa30.03■■■□□ 2.4
CDK9-202ENST00000421939 XBP1P17861 261 aa30.03■■■□□ 2.4
CDK9-202ENST00000421939 CCDC155Q8N6L0 562 aa30.03■■■□□ 2.4
CDK9-202ENST00000421939 WASF1Q92558 559 aa30.03■■■□□ 2.4
CDK9-202ENST00000421939 UPF2Q9HAU5 1272 aaKnown RBP30.03■■■□□ 2.4
CDK9-202ENST00000421939 KCNJ14Q9UNX9 436 aa30.03■■■□□ 2.4
CDK9-202ENST00000421939 LIMCH1Q9UPQ0 1083 aa30.03■■■□□ 2.4
CDK9-202ENST00000421939 M0R2N6 131 aa30.02■■■□□ 2.4
CDK9-202ENST00000421939 SMIM10L2AP0DMW4 78 aa30.02■■■□□ 2.4
CDK9-202ENST00000421939 SMIM10L2BP0DMW5 78 aa30.02■■■□□ 2.4
CDK9-202ENST00000421939 CIITAP33076 1130 aa30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms