RNA–Protein interactions for RNA: ENST00000421722.5

PMS1-208, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,285 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-208ENST00000421722 SIRT2Q8IXJ6 389 aa7.79□□□□□ -1.16
PMS1-208ENST00000421722 UBALD2Q8IYN6 164 aa7.79□□□□□ -1.16
PMS1-208ENST00000421722 SUSD6Q92537 303 aa7.79□□□□□ -1.16
PMS1-208ENST00000421722 ATP6V0A1Q93050 837 aa7.79□□□□□ -1.16
PMS1-208ENST00000421722 RIPOR3Q96MK2 946 aa7.79□□□□□ -1.16
PMS1-208ENST00000421722 TAAR1Q96RJ0 339 aa7.79□□□□□ -1.16
PMS1-208ENST00000421722 GPCPD1Q9NPB8 672 aa7.79□□□□□ -1.16
PMS1-208ENST00000421722 CLEC1BQ9P126 229 aa7.79□□□□□ -1.16
PMS1-208ENST00000421722 PLAGL2Q9UPG8 496 aa7.79□□□□□ -1.16
PMS1-208ENST00000421722 LINC01565O15544 149 aa7.78□□□□□ -1.16
PMS1-208ENST00000421722 UPP2O95045 317 aa7.78□□□□□ -1.16
PMS1-208ENST00000421722 UBE3AQ05086 875 aa7.78□□□□□ -1.16
PMS1-208ENST00000421722 HIC1Q14526 733 aa7.78□□□□□ -1.16
PMS1-208ENST00000421722 ZMYM1Q5SVZ6 1142 aa7.78□□□□□ -1.16
PMS1-208ENST00000421722 GPATCH4Q5T3I0 446 aaKnown RBP7.78□□□□□ -1.16
PMS1-208ENST00000421722 PDE12Q6L8Q7 609 aaKnown RBP7.78□□□□□ -1.16
PMS1-208ENST00000421722 ASCL5Q7RTU5 278 aa7.78□□□□□ -1.16
PMS1-208ENST00000421722 TMEM47Q9BQJ4 181 aa7.78□□□□□ -1.16
PMS1-208ENST00000421722 IGFLR1Q9H665 355 aa7.78□□□□□ -1.16
PMS1-208ENST00000421722 TRPC6Q9Y210 931 aa7.78□□□□□ -1.16
PMS1-208ENST00000421722 MRPL11Q9Y3B7 192 aaKnown RBP7.78□□□□□ -1.16
PMS1-208ENST00000421722 USP15Q9Y4E8 981 aaPredicted RBP7.78□□□□□ -1.16
PMS1-208ENST00000421722 MRVI1Q9Y6F6 885 aa7.78□□□□□ -1.16
PMS1-208ENST00000421722 BRWD1Q9NSI6 2320 aa7.78□□□□□ -1.16
PMS1-208ENST00000421722 RPLP2P05387 115 aaKnown RBP7.78□□□□□ -1.16
PMS1-208ENST00000421722 ZNF286BP0CG31 522 aa7.78□□□□□ -1.16
PMS1-208ENST00000421722 TGFB3P10600 412 aa7.78□□□□□ -1.16
PMS1-208ENST00000421722 PDHBP11177 359 aa7.78□□□□□ -1.16
PMS1-208ENST00000421722 MYSM1Q5VVJ2 828 aa7.78□□□□□ -1.16
PMS1-208ENST00000421722 SPPL3Q8TCT6 385 aa7.78□□□□□ -1.16
PMS1-208ENST00000421722 ATP8B4Q8TF62 1192 aa7.78□□□□□ -1.16
PMS1-208ENST00000421722 RMDN3Q96TC7 470 aa7.78□□□□□ -1.16
PMS1-208ENST00000421722 INCENPQ9NQS7 918 aa7.78□□□□□ -1.16
PMS1-208ENST00000421722 ZBTB40Q9NUA8 1239 aa7.78□□□□□ -1.16
PMS1-208ENST00000421722 DDX19BQ9UMR2 479 aa7.78□□□□□ -1.16
PMS1-208ENST00000421722 CCER2I3L3R5 266 aa7.77□□□□□ -1.17
PMS1-208ENST00000421722 SRGAP2BP0DMP2 458 aa7.77□□□□□ -1.17
PMS1-208ENST00000421722 SMIM10L2AP0DMW4 78 aa7.77□□□□□ -1.17
PMS1-208ENST00000421722 SMIM10L2BP0DMW5 78 aa7.77□□□□□ -1.17
PMS1-208ENST00000421722 HSPD1P10809 573 aaKnown RBP7.77□□□□□ -1.17
PMS1-208ENST00000421722 PCP11498 1178 aaKnown RBP7.77□□□□□ -1.17
PMS1-208ENST00000421722 CCDC178Q5BJE1 867 aa7.77□□□□□ -1.17
PMS1-208ENST00000421722 ARHGEF16Q5VV41 709 aa7.77□□□□□ -1.17
PMS1-208ENST00000421722 TMEM184AQ6ZMB5 413 aa7.77□□□□□ -1.17
PMS1-208ENST00000421722 CHST3Q7LGC8 479 aa7.77□□□□□ -1.17
PMS1-208ENST00000421722 C16orf70Q9BSU1 422 aa7.77□□□□□ -1.17
PMS1-208ENST00000421722 EHMT1Q9H9B1 1298 aa7.77□□□□□ -1.17
PMS1-208ENST00000421722 PXMP2Q9NR77 195 aa7.77□□□□□ -1.17
PMS1-208ENST00000421722 FRMPD2Q68DX3 1309 aaPredicted RBP7.77□□□□□ -1.17
PMS1-208ENST00000421722 CCDC171Q6TFL3 1326 aa7.77□□□□□ -1.17
PMS1-208ENST00000421722 ENPP3O14638 875 aa7.77□□□□□ -1.17
PMS1-208ENST00000421722 RANBP6O60518 1105 aaKnown RBP7.77□□□□□ -1.17
PMS1-208ENST00000421722 NMT2O60551 498 aa7.77□□□□□ -1.17
PMS1-208ENST00000421722 RGS20O76081 388 aa7.77□□□□□ -1.17
PMS1-208ENST00000421722 NR3C2P08235 984 aa7.77□□□□□ -1.17
PMS1-208ENST00000421722 CAMK1Q14012 370 aa7.77□□□□□ -1.17
PMS1-208ENST00000421722 BTG3Q14201 252 aaPredicted RBP7.77□□□□□ -1.17
PMS1-208ENST00000421722 RASGRP2Q7LDG7 609 aa7.77□□□□□ -1.17
PMS1-208ENST00000421722 TICAM2Q86XR7 235 aa7.77□□□□□ -1.17
PMS1-208ENST00000421722 NKD2Q969F2 451 aaPredicted RBP7.77□□□□□ -1.17
PMS1-208ENST00000421722 SPATA33Q96N06 139 aa7.77□□□□□ -1.17
PMS1-208ENST00000421722 SEMA4AQ9H3S1 761 aa7.77□□□□□ -1.17
PMS1-208ENST00000421722 NR2E1Q9Y466 385 aa7.77□□□□□ -1.17
PMS1-208ENST00000421722 SQORQ9Y6N5 450 aa7.77□□□□□ -1.17
PMS1-208ENST00000421722 CDH23Q9H251 3354 aa7.76□□□□□ -1.17
PMS1-208ENST00000421722 DGKIO75912 1065 aa7.76□□□□□ -1.17
PMS1-208ENST00000421722 GTF2F1P35269 517 aaKnown RBP eCLIP7.76□□□□□ -1.17
PMS1-208ENST00000421722 CTDSPL2Q05D32 466 aa7.76□□□□□ -1.17
PMS1-208ENST00000421722 NPAS4Q8IUM7 802 aa7.76□□□□□ -1.17
PMS1-208ENST00000421722 NEK1Q96PY6 1258 aa7.76□□□□□ -1.17
PMS1-208ENST00000421722 COL20A1Q9P218 1284 aa7.76□□□□□ -1.17
PMS1-208ENST00000421722 H0Y858 1186 aa7.76□□□□□ -1.17
PMS1-208ENST00000421722 H3BRB1 525 aa7.76□□□□□ -1.17
PMS1-208ENST00000421722 TREHO43280 583 aa7.76□□□□□ -1.17
PMS1-208ENST00000421722 ITGB1P05556 798 aa7.76□□□□□ -1.17
PMS1-208ENST00000421722 STAG3L1P0CL83 205 aa7.76□□□□□ -1.17
PMS1-208ENST00000421722 HSD17B4P51659 736 aa7.76□□□□□ -1.17
PMS1-208ENST00000421722 CLCN5P51795 746 aa7.76□□□□□ -1.17
PMS1-208ENST00000421722 ADAM17P78536 824 aa7.76□□□□□ -1.17
PMS1-208ENST00000421722 MGAT3Q09327 533 aa7.76□□□□□ -1.17
PMS1-208ENST00000421722 DUSP6Q16828 381 aa7.76□□□□□ -1.17
PMS1-208ENST00000421722 RSPH3Q86UC2 560 aa7.76□□□□□ -1.17
PMS1-208ENST00000421722 PANK1Q8TE04 598 aa7.76□□□□□ -1.17
PMS1-208ENST00000421722 CHMP4CQ96CF2 233 aa7.76□□□□□ -1.17
PMS1-208ENST00000421722 TUT1Q9H6E5 874 aaKnown RBP7.76□□□□□ -1.17
PMS1-208ENST00000421722 TLR9Q9NR96 1032 aa7.76□□□□□ -1.17
PMS1-208ENST00000421722 MTMR7Q9Y216 660 aa7.76□□□□□ -1.17
PMS1-208ENST00000421722 MUC3AQ02505 3323 aa7.76□□□□□ -1.17
PMS1-208ENST00000421722 ZMYM6O95789 1325 aa7.76□□□□□ -1.17
PMS1-208ENST00000421722 TTC41PQ6P2S7 1318 aa7.76□□□□□ -1.17
PMS1-208ENST00000421722 GGPS1O95749 300 aa7.75□□□□□ -1.17
PMS1-208ENST00000421722 GLP2RO95838 553 aa7.75□□□□□ -1.17
PMS1-208ENST00000421722 LGALS2P05162 132 aa7.75□□□□□ -1.17
PMS1-208ENST00000421722 HOXB8P17481 243 aaPredicted RBP7.75□□□□□ -1.17
PMS1-208ENST00000421722 NRIP1P48552 1158 aa7.75□□□□□ -1.17
PMS1-208ENST00000421722 TRAF1Q13077 416 aa7.75□□□□□ -1.17
PMS1-208ENST00000421722 CDC37Q16543 378 aaPredicted RBP7.75□□□□□ -1.17
PMS1-208ENST00000421722 ASTLQ6HA08 431 aaPredicted RBP7.75□□□□□ -1.17
PMS1-208ENST00000421722 TAF2Q6P1X5 1199 aa7.75□□□□□ -1.17
PMS1-208ENST00000421722 ADGRD2Q7Z7M1 963 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms