RNA–Protein interactions for RNA: ENST00000421689.6

CAST-208, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-208ENST00000421689 ITGB3BPQ13352 177 aaPredicted RBP13.33□□□□□ -0.28
CAST-208ENST00000421689 LAMC2Q13753 1193 aa13.33□□□□□ -0.28
CAST-208ENST00000421689 MTFR1Q15390 333 aa13.33□□□□□ -0.28
CAST-208ENST00000421689 CELF3Q5SZQ8 465 aaKnown RBP13.33□□□□□ -0.28
CAST-208ENST00000421689 TMEM63BQ5T3F8 832 aa13.33□□□□□ -0.28
CAST-208ENST00000421689 LRCH2Q5VUJ6 765 aa13.33□□□□□ -0.28
CAST-208ENST00000421689 METTL7BQ6UX53 244 aa13.33□□□□□ -0.28
CAST-208ENST00000421689 CYFIP1Q7L576 1253 aa13.33□□□□□ -0.28
CAST-208ENST00000421689 DHX37Q8IY37 1157 aaKnown RBP13.33□□□□□ -0.28
CAST-208ENST00000421689 HAS1Q92839 578 aa13.33□□□□□ -0.28
CAST-208ENST00000421689 COPS5Q92905 334 aa13.33□□□□□ -0.28
CAST-208ENST00000421689 USP28Q96RU2 1077 aa13.33□□□□□ -0.28
CAST-208ENST00000421689 TMEM60Q9H2L4 133 aa13.33□□□□□ -0.28
CAST-208ENST00000421689 MLXIPQ9HAP2 919 aa13.33□□□□□ -0.28
CAST-208ENST00000421689 PAK6Q9NQU5 681 aaPredicted RBP13.33□□□□□ -0.28
CAST-208ENST00000421689 TFIP11Q9UBB9 837 aaKnown RBP13.33□□□□□ -0.28
CAST-208ENST00000421689 CLIC4Q9Y696 253 aa13.33□□□□□ -0.28
CAST-208ENST00000421689 FRMPD3Q5JV73 1810 aa13.32□□□□□ -0.28
CAST-208ENST00000421689 DHX15O43143 795 aaKnown RBP13.32□□□□□ -0.28
CAST-208ENST00000421689 DYNC1LI2O43237 492 aaPredicted RBP13.32□□□□□ -0.28
CAST-208ENST00000421689 GAS7O60861 476 aa13.32□□□□□ -0.28
CAST-208ENST00000421689 PSMD10O75832 226 aa13.32□□□□□ -0.28
CAST-208ENST00000421689 PRPHP41219 470 aa13.32□□□□□ -0.28
CAST-208ENST00000421689 TXKP42681 527 aa13.32□□□□□ -0.28
CAST-208ENST00000421689 NASPP49321 788 aaPredicted RBP13.32□□□□□ -0.28
CAST-208ENST00000421689 ATP2C1P98194 919 aaPredicted RBP13.32□□□□□ -0.28
CAST-208ENST00000421689 CEBPZQ03701 1054 aaKnown RBP13.32□□□□□ -0.28
CAST-208ENST00000421689 DNM1Q05193 864 aaKnown RBP13.32□□□□□ -0.28
CAST-208ENST00000421689 ARHGAP1Q07960 439 aa13.32□□□□□ -0.28
CAST-208ENST00000421689 TLK2Q86UE8 772 aa13.32□□□□□ -0.28
CAST-208ENST00000421689 OR6J1Q8NGC5 347 aa13.32□□□□□ -0.28
CAST-208ENST00000421689 GJA10Q969M2 543 aa13.32□□□□□ -0.28
CAST-208ENST00000421689 EMID1Q96A84 441 aaPredicted RBP13.32□□□□□ -0.28
CAST-208ENST00000421689 UIMC1Q96RL1 719 aa13.32□□□□□ -0.28
CAST-208ENST00000421689 TEKT3Q9BXF9 490 aa13.32□□□□□ -0.28
CAST-208ENST00000421689 AP5M1Q9H0R1 490 aa13.32□□□□□ -0.28
CAST-208ENST00000421689 RNF208Q9H0X6 261 aa13.32□□□□□ -0.28
CAST-208ENST00000421689 SPC25Q9HBM1 224 aa13.32□□□□□ -0.28
CAST-208ENST00000421689 JPH1Q9HDC5 661 aaPredicted RBP13.32□□□□□ -0.28
CAST-208ENST00000421689 SLC9A2Q9UBY0 812 aa13.32□□□□□ -0.28
CAST-208ENST00000421689 TCEAL9Q9UHQ7 104 aa13.32□□□□□ -0.28
CAST-208ENST00000421689 PCDHA12Q9UN75 941 aa13.32□□□□□ -0.28
CAST-208ENST00000421689 TCHHQ07283 1943 aa13.32□□□□□ -0.28
CAST-208ENST00000421689 HTTP42858 3142 aa13.32□□□□□ -0.28
CAST-208ENST00000421689 DDX39AO00148 427 aaKnown RBP13.31□□□□□ -0.28
CAST-208ENST00000421689 FARP2O94887 1054 aaPredicted RBP13.31□□□□□ -0.28
CAST-208ENST00000421689 YEATS4O95619 227 aa13.31□□□□□ -0.28
CAST-208ENST00000421689 MYCP01106 439 aaPredicted RBP13.31□□□□□ -0.28
CAST-208ENST00000421689 GJA9P57773 515 aa13.31□□□□□ -0.28
CAST-208ENST00000421689 KRT85P78386 507 aa13.31□□□□□ -0.28
CAST-208ENST00000421689 KRT76Q01546 638 aa13.31□□□□□ -0.28
CAST-208ENST00000421689 SLC39A14Q15043 492 aa13.31□□□□□ -0.28
CAST-208ENST00000421689 STK38Q15208 465 aa13.31□□□□□ -0.28
CAST-208ENST00000421689 PTPAQ15257 358 aa13.31□□□□□ -0.28
CAST-208ENST00000421689 BRDTQ58F21 947 aaPredicted RBP13.31□□□□□ -0.28
CAST-208ENST00000421689 GJC2Q5T442 439 aaPredicted RBP13.31□□□□□ -0.28
CAST-208ENST00000421689 ARL6IP4Q66PJ3 421 aaKnown RBP13.31□□□□□ -0.28
CAST-208ENST00000421689 LHX8Q68G74 356 aa13.31□□□□□ -0.28
CAST-208ENST00000421689 LENG1Q96BZ8 264 aaPredicted RBP13.31□□□□□ -0.28
CAST-208ENST00000421689 FTOQ9C0B1 505 aaKnown RBP eCLIP13.31□□□□□ -0.28
CAST-208ENST00000421689 BCAS3Q9H6U6 928 aa13.31□□□□□ -0.28
CAST-208ENST00000421689 TTC12Q9H892 705 aaPredicted RBP13.31□□□□□ -0.28
CAST-208ENST00000421689 MORC2Q9Y6X9 1032 aaPredicted RBP13.31□□□□□ -0.28
CAST-208ENST00000421689 NOP56O00567 594 aaKnown RBP13.3□□□□□ -0.28
CAST-208ENST00000421689 SORBS3O60504 671 aa13.3□□□□□ -0.28
CAST-208ENST00000421689 NCLP19338 710 aaKnown RBP13.3□□□□□ -0.28
CAST-208ENST00000421689 NKX3-2P78367 333 aa13.3□□□□□ -0.28
CAST-208ENST00000421689 C1QBPQ07021 282 aaKnown RBP13.3□□□□□ -0.28
CAST-208ENST00000421689 PPP2R5CQ13362 524 aa13.3□□□□□ -0.28
CAST-208ENST00000421689 TMEM266Q2M3C6 531 aa13.3□□□□□ -0.28
CAST-208ENST00000421689 ZNF746Q6NUN9 644 aaPredicted RBP13.3□□□□□ -0.28
CAST-208ENST00000421689 DTHD1Q6ZMT9 781 aa13.3□□□□□ -0.28
CAST-208ENST00000421689 LINC00301Q8NCQ3 95 aa13.3□□□□□ -0.28
CAST-208ENST00000421689 TNPO1Q92973 898 aaKnown RBP13.3□□□□□ -0.28
CAST-208ENST00000421689 FERMT2Q96AC1 680 aa13.3□□□□□ -0.28
CAST-208ENST00000421689 SPATA33Q96N06 139 aa13.3□□□□□ -0.28
CAST-208ENST00000421689 DEFB118Q96PH6 123 aa13.3□□□□□ -0.28
CAST-208ENST00000421689 UPF3AQ9H1J1 476 aaKnown RBP13.3□□□□□ -0.28
CAST-208ENST00000421689 XPNPEP3Q9NQH7 507 aa13.3□□□□□ -0.28
CAST-208ENST00000421689 SYNRGQ9UMZ2 1314 aa13.3□□□□□ -0.28
CAST-208ENST00000421689 POTEFA5A3E0 1075 aa13.29□□□□□ -0.28
CAST-208ENST00000421689 A6NJR5 290 aa13.29□□□□□ -0.28
CAST-208ENST00000421689 SPTLC2O15270 562 aa13.29□□□□□ -0.28
CAST-208ENST00000421689 PPP6R2O75170 966 aa13.29□□□□□ -0.28
CAST-208ENST00000421689 ADAMTS4O75173 837 aa13.29□□□□□ -0.28
CAST-208ENST00000421689 GJB1P08034 283 aa13.29□□□□□ -0.28
CAST-208ENST00000421689 C6orf222P0C671 652 aaPredicted RBP13.29□□□□□ -0.28
CAST-208ENST00000421689 PTGS1P23219 599 aa13.29□□□□□ -0.28
CAST-208ENST00000421689 SFNP31947 248 aa13.29□□□□□ -0.28
CAST-208ENST00000421689 TECP42680 631 aa13.29□□□□□ -0.28
CAST-208ENST00000421689 CPT1AP50416 773 aa13.29□□□□□ -0.28
CAST-208ENST00000421689 FXR2P51116 673 aaKnown RBP eCLIP13.29□□□□□ -0.284e-6■■■□□ 16.4
CAST-208ENST00000421689 ACTR2P61160 394 aa13.29□□□□□ -0.28
CAST-208ENST00000421689 PDIA5Q14554 519 aa13.29□□□□□ -0.28
CAST-208ENST00000421689 FSCN1Q16658 493 aaKnown RBP13.29□□□□□ -0.28
CAST-208ENST00000421689 HSDL1Q3SXM5 330 aa13.29□□□□□ -0.28
CAST-208ENST00000421689 COL13A1Q5TAT6 717 aaPredicted RBP13.29□□□□□ -0.28
CAST-208ENST00000421689 B3GNT9Q6UX72 402 aa13.29□□□□□ -0.28
CAST-208ENST00000421689 SMAP1Q8IYB5 467 aaPredicted RBP13.29□□□□□ -0.28
CAST-208ENST00000421689 ARRDC4Q8NCT1 418 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms