RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 ABHD14A-ACY1A0A1B0GW23 586 aa21.79■■□□□ 1.08
VARS2-202ENST00000421263 RFXAPO00287 272 aa21.79■■□□□ 1.08
VARS2-202ENST00000421263 KCNJ6P48051 423 aa21.79■■□□□ 1.08
VARS2-202ENST00000421263 NFXL1Q6ZNB6 911 aa21.79■■□□□ 1.08
VARS2-202ENST00000421263 CYFIP1Q7L576 1253 aa21.79■■□□□ 1.08
VARS2-202ENST00000421263 CUL5Q93034 780 aa21.79■■□□□ 1.08
VARS2-202ENST00000421263 GPR20Q99678 358 aa21.79■■□□□ 1.08
VARS2-202ENST00000421263 RNPEPQ9H4A4 650 aa21.79■■□□□ 1.08
VARS2-202ENST00000421263 THEGQ9P2T0 379 aa21.79■■□□□ 1.08
VARS2-202ENST00000421263 SEC63Q9UGP8 760 aaKnown RBP21.79■■□□□ 1.08
VARS2-202ENST00000421263 TTC28Q96AY4 2481 aa21.78■■□□□ 1.08
VARS2-202ENST00000421263 EPOPA6NHQ4 379 aa21.78■■□□□ 1.08
VARS2-202ENST00000421263 BMP2KLQ5H9B9 411 aa21.78■■□□□ 1.08
VARS2-202ENST00000421263 SGMS1Q86VZ5 419 aa21.78■■□□□ 1.08
VARS2-202ENST00000421263 CMTR1Q8N1G2 835 aaKnown RBP21.78■■□□□ 1.08
VARS2-202ENST00000421263 ASB2Q96Q27 587 aa21.78■■□□□ 1.08
VARS2-202ENST00000421263 MTCH2Q9Y6C9 303 aa21.78■■□□□ 1.08
VARS2-202ENST00000421263 C17orf102A2RUQ5 167 aa21.77■■□□□ 1.08
VARS2-202ENST00000421263 NOP56O00567 594 aaKnown RBP21.77■■□□□ 1.08
VARS2-202ENST00000421263 TLL1O43897 1013 aa21.77■■□□□ 1.08
VARS2-202ENST00000421263 EFCAB14O75071 495 aa21.77■■□□□ 1.08
VARS2-202ENST00000421263 SMIM10L2AP0DMW4 78 aa21.77■■□□□ 1.08
VARS2-202ENST00000421263 SMIM10L2BP0DMW5 78 aa21.77■■□□□ 1.08
VARS2-202ENST00000421263 RXRAP19793 462 aa21.77■■□□□ 1.08
VARS2-202ENST00000421263 DEFB103AP81534 67 aa21.77■■□□□ 1.08
VARS2-202ENST00000421263 IKBKEQ14164 716 aa21.77■■□□□ 1.08
VARS2-202ENST00000421263 FANCBQ8NB91 859 aa21.77■■□□□ 1.08
VARS2-202ENST00000421263 ATP6V0A1Q93050 837 aa21.77■■□□□ 1.08
VARS2-202ENST00000421263 PSTPIP2Q9H939 334 aa21.77■■□□□ 1.08
VARS2-202ENST00000421263 CERS4Q9HA82 394 aa21.77■■□□□ 1.08
VARS2-202ENST00000421263 ANO2Q9NQ90 1003 aa21.77■■□□□ 1.08
VARS2-202ENST00000421263 TELO2Q9Y4R8 837 aa21.77■■□□□ 1.08
VARS2-202ENST00000421263 SLC12A7Q9Y666 1083 aa21.77■■□□□ 1.08
VARS2-202ENST00000421263 MRPS5P82675 430 aaKnown RBP21.76■■□□□ 1.07
VARS2-202ENST00000421263 MKRN4PQ13434 485 aaPredicted RBP21.76■■□□□ 1.07
VARS2-202ENST00000421263 LRRC2Q9BYS8 371 aa21.76■■□□□ 1.07
VARS2-202ENST00000421263 MUC3AQ02505 3323 aa21.76■■□□□ 1.07
VARS2-202ENST00000421263 EMSYQ7Z589 1322 aa21.76■■□□□ 1.07
VARS2-202ENST00000421263 RSPH10B2B2RC85 870 aa21.75■■□□□ 1.07
VARS2-202ENST00000421263 TREHO43280 583 aa21.75■■□□□ 1.07
VARS2-202ENST00000421263 LGR5O75473 907 aa21.75■■□□□ 1.07
VARS2-202ENST00000421263 GJB5O95377 273 aa21.75■■□□□ 1.07
VARS2-202ENST00000421263 RSPH10BP0C881 870 aa21.75■■□□□ 1.07
VARS2-202ENST00000421263 THPOP40225 353 aa21.75■■□□□ 1.07
VARS2-202ENST00000421263 ADAM17P78536 824 aa21.75■■□□□ 1.07
VARS2-202ENST00000421263 TMTC3Q6ZXV5 915 aa21.75■■□□□ 1.07
VARS2-202ENST00000421263 TMCO2Q7Z6W1 182 aaPredicted RBP21.75■■□□□ 1.07
VARS2-202ENST00000421263 NLRX1Q86UT6 975 aa21.75■■□□□ 1.07
VARS2-202ENST00000421263 GIMAP8Q8ND71 665 aaPredicted RBP21.75■■□□□ 1.07
VARS2-202ENST00000421263 RAD9AQ99638 391 aa21.75■■□□□ 1.07
VARS2-202ENST00000421263 DOCK5Q9H7D0 1870 aa21.75■■□□□ 1.07
VARS2-202ENST00000421263 LCHNA4D1U4 455 aa21.74■■□□□ 1.07
VARS2-202ENST00000421263 ATP9AO75110 1047 aa21.74■■□□□ 1.07
VARS2-202ENST00000421263 EXOSC10Q01780 885 aaKnown RBP21.74■■□□□ 1.07
VARS2-202ENST00000421263 TSGA10IPQ3SY00 556 aa21.74■■□□□ 1.07
VARS2-202ENST00000421263 PLEKHG4Q58EX7 1191 aa21.74■■□□□ 1.07
VARS2-202ENST00000421263 SPRED2Q7Z698 418 aa21.74■■□□□ 1.07
VARS2-202ENST00000421263 DBF4BQ8NFT6 615 aa21.74■■□□□ 1.07
VARS2-202ENST00000421263 ARNTL2Q8WYA1 636 aa21.74■■□□□ 1.07
VARS2-202ENST00000421263 GPRASP2Q96D09 838 aa21.74■■□□□ 1.07
VARS2-202ENST00000421263 PRRC2BQ5JSZ5 2229 aaKnown RBP21.74■■□□□ 1.07
VARS2-202ENST00000421263 RBAK-RBAKDNI3L0D1 243 aa21.73■■□□□ 1.07
VARS2-202ENST00000421263 GTPBP6O43824 516 aaPredicted RBP21.73■■□□□ 1.07
VARS2-202ENST00000421263 LPXNO60711 386 aa21.73■■□□□ 1.07
VARS2-202ENST00000421263 CAND2O75155 1236 aa21.73■■□□□ 1.07
VARS2-202ENST00000421263 ITGB5P18084 799 aa21.73■■□□□ 1.07
VARS2-202ENST00000421263 RNF20Q5VTR2 975 aa21.73■■□□□ 1.07
VARS2-202ENST00000421263 CENPQQ7L2Z9 268 aaPredicted RBP21.73■■□□□ 1.07
VARS2-202ENST00000421263 SKAP1Q86WV1 359 aa21.73■■□□□ 1.07
VARS2-202ENST00000421263 RAB11FIP4Q86YS3 637 aa21.73■■□□□ 1.07
VARS2-202ENST00000421263 CCDC82Q8N4S0 544 aa21.73■■□□□ 1.07
VARS2-202ENST00000421263 NEK1Q96PY6 1258 aa21.73■■□□□ 1.07
VARS2-202ENST00000421263 ZBED2Q9BTP6 218 aa21.73■■□□□ 1.07
VARS2-202ENST00000421263 TSPYL2Q9H2G4 693 aaPredicted RBP21.73■■□□□ 1.07
VARS2-202ENST00000421263 UBIAD1Q9Y5Z9 338 aa21.73■■□□□ 1.07
VARS2-202ENST00000421263 XIRP2A4UGR9 3374 aa21.72■■□□□ 1.07
VARS2-202ENST00000421263 hCG_1642624A0A1W2PR95 340 aa21.72■■□□□ 1.07
VARS2-202ENST00000421263 GNAT1P11488 350 aa21.72■■□□□ 1.07
VARS2-202ENST00000421263 KCNA2P16389 499 aa21.72■■□□□ 1.07
VARS2-202ENST00000421263 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.72■■□□□ 1.07
VARS2-202ENST00000421263 CDHR1Q96JP9 859 aa21.72■■□□□ 1.07
VARS2-202ENST00000421263 SETD4Q9NVD3 440 aa21.72■■□□□ 1.07
VARS2-202ENST00000421263 MAFGO15525 162 aa21.71■■□□□ 1.07
VARS2-202ENST00000421263 GRB10Q13322 594 aa21.71■■□□□ 1.07
VARS2-202ENST00000421263 UBE2SQ16763 222 aa21.71■■□□□ 1.07
VARS2-202ENST00000421263 UTP14CQ5TAP6 766 aaKnown RBP21.71■■□□□ 1.07
VARS2-202ENST00000421263 APOA5Q6Q788 366 aa21.71■■□□□ 1.07
VARS2-202ENST00000421263 TRIM50Q86XT4 487 aa21.71■■□□□ 1.07
VARS2-202ENST00000421263 MICALL1Q8N3F8 863 aa21.71■■□□□ 1.07
VARS2-202ENST00000421263 OSBPL7Q9BZF2 842 aa21.71■■□□□ 1.07
VARS2-202ENST00000421263 LMCD1Q9NZU5 365 aa21.71■■□□□ 1.07
VARS2-202ENST00000421263 ZNF215Q9UL58 517 aaPredicted RBP21.71■■□□□ 1.07
VARS2-202ENST00000421263 PCDHA6Q9UN73 950 aa21.71■■□□□ 1.07
VARS2-202ENST00000421263 PCDHA8Q9Y5H6 950 aa21.71■■□□□ 1.07
VARS2-202ENST00000421263 GSTTP1A0A1W2PQM5 241 aa21.7■■□□□ 1.06
VARS2-202ENST00000421263 TNFRSF10AO00220 468 aa21.7■■□□□ 1.06
VARS2-202ENST00000421263 TCF7P36402 384 aaPredicted RBP21.7■■□□□ 1.06
VARS2-202ENST00000421263 ERVK-21P61565 698 aa21.7■■□□□ 1.06
VARS2-202ENST00000421263 FUT2Q10981 343 aa21.7■■□□□ 1.06
VARS2-202ENST00000421263 FAM26DQ5JW98 314 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms