RNA–Protein interactions for RNA: ENST00000419654.6

SEC24D-202, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC24D, Length 2,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-202ENST00000419654 BEND6Q5SZJ8 279 aaPredicted RBP16.97■□□□□ 0.31
SEC24D-202ENST00000419654 PSMB7Q99436 277 aa16.97■□□□□ 0.31
SEC24D-202ENST00000419654 SEMA6BQ9H3T3 888 aa16.97■□□□□ 0.31
SEC24D-202ENST00000419654 NHEJ1Q9H9Q4 299 aaPredicted RBP16.97■□□□□ 0.31
SEC24D-202ENST00000419654 TBC1D7Q9P0N9 293 aa16.97■□□□□ 0.31
SEC24D-202ENST00000419654 PRR12Q9ULL5 1215 aa16.97■□□□□ 0.31
SEC24D-202ENST00000419654 MYH7BA7E2Y1 1941 aa16.97■□□□□ 0.31
SEC24D-202ENST00000419654 CYP2C19P33261 490 aa16.97■□□□□ 0.31
SEC24D-202ENST00000419654 STAT2P52630 851 aa16.97■□□□□ 0.31
SEC24D-202ENST00000419654 IKQ13123 557 aaPredicted RBP16.97■□□□□ 0.31
SEC24D-202ENST00000419654 FBXO11Q86XK2 927 aa16.97■□□□□ 0.31
SEC24D-202ENST00000419654 GSPT2Q8IYD1 628 aaKnown RBP16.97■□□□□ 0.31
SEC24D-202ENST00000419654 AK8Q96MA6 479 aa16.97■□□□□ 0.31
SEC24D-202ENST00000419654 SH2D4AQ9H788 454 aa16.97■□□□□ 0.31
SEC24D-202ENST00000419654 MYH10P35580 1976 aa16.96■□□□□ 0.31
SEC24D-202ENST00000419654 MYMKA6NI61 221 aa16.96■□□□□ 0.31
SEC24D-202ENST00000419654 SSBP05455 408 aaKnown RBP eCLIP16.96■□□□□ 0.31
SEC24D-202ENST00000419654 CCNE1P24864 410 aa16.96■□□□□ 0.31
SEC24D-202ENST00000419654 DNM2P50570 870 aa16.96■□□□□ 0.31
SEC24D-202ENST00000419654 SNAP25P60880 206 aa16.96■□□□□ 0.31
SEC24D-202ENST00000419654 RAD51AP2Q09MP3 1159 aa16.96■□□□□ 0.31
SEC24D-202ENST00000419654 PPP4R3AQ6IN85 833 aa16.96■□□□□ 0.31
SEC24D-202ENST00000419654 KCNK18Q7Z418 384 aa16.96■□□□□ 0.31
SEC24D-202ENST00000419654 JAKMIP2Q96AA8 810 aa16.96■□□□□ 0.31
SEC24D-202ENST00000419654 MTMR9Q96QG7 549 aa16.96■□□□□ 0.31
SEC24D-202ENST00000419654 DNAJC7Q99615 494 aa16.96■□□□□ 0.31
SEC24D-202ENST00000419654 LRWD1Q9UFC0 647 aa16.96■□□□□ 0.31
SEC24D-202ENST00000419654 SBF1O95248 1867 aa16.96■□□□□ 0.31
SEC24D-202ENST00000419654 AMPD2Q01433 879 aa16.96■□□□□ 0.31
SEC24D-202ENST00000419654 FAM83BQ5T0W9 1011 aa16.96■□□□□ 0.31
SEC24D-202ENST00000419654 DEFB129Q9H1M3 183 aa16.96■□□□□ 0.31
SEC24D-202ENST00000419654 VPS18Q9P253 973 aa16.96■□□□□ 0.31
SEC24D-202ENST00000419654 PLA2G6O60733 806 aa16.95■□□□□ 0.3
SEC24D-202ENST00000419654 LMNB1P20700 586 aa16.95■□□□□ 0.3
SEC24D-202ENST00000419654 CACNB1Q02641 598 aaPredicted RBP16.95■□□□□ 0.3
SEC24D-202ENST00000419654 GRB10Q13322 594 aa16.95■□□□□ 0.3
SEC24D-202ENST00000419654 CALCRLQ16602 461 aa16.95■□□□□ 0.3
SEC24D-202ENST00000419654 MIIPQ5JXC2 388 aa16.95■□□□□ 0.3
SEC24D-202ENST00000419654 CALML4Q96GE6 196 aa16.95■□□□□ 0.3
SEC24D-202ENST00000419654 CDK5RAP3Q96JB5 506 aa16.95■□□□□ 0.3
SEC24D-202ENST00000419654 MMRN2Q9H8L6 949 aa16.95■□□□□ 0.3
SEC24D-202ENST00000419654 USP17L15C9J2P7 530 aa16.95■□□□□ 0.3
SEC24D-202ENST00000419654 USP17L13C9JLJ4 530 aa16.95■□□□□ 0.3
SEC24D-202ENST00000419654 USP17L11C9JVI0 530 aa16.95■□□□□ 0.3
SEC24D-202ENST00000419654 USP17L18D6R9N7 530 aa16.95■□□□□ 0.3
SEC24D-202ENST00000419654 USP17L22D6RA61 530 aa16.95■□□□□ 0.3
SEC24D-202ENST00000419654 USP17L17D6RBQ6 530 aa16.95■□□□□ 0.3
SEC24D-202ENST00000419654 USP17L19D6RCP7 530 aa16.95■□□□□ 0.3
SEC24D-202ENST00000419654 USP17L20D6RJB6 530 aa16.95■□□□□ 0.3
SEC24D-202ENST00000419654 MEIS2O14770 477 aa16.95■□□□□ 0.3
SEC24D-202ENST00000419654 USP17L24Q0WX57 530 aa16.95■□□□□ 0.3
SEC24D-202ENST00000419654 BRD3Q15059 726 aa16.95■□□□□ 0.3
SEC24D-202ENST00000419654 USP17L6PQ6QN14 398 aa16.95■□□□□ 0.3
SEC24D-202ENST00000419654 ARHGAP27Q6ZUM4 889 aa16.95■□□□□ 0.3
SEC24D-202ENST00000419654 ANKRD13CQ8N6S4 541 aa16.95■□□□□ 0.3
SEC24D-202ENST00000419654 GLIS2Q9BZE0 524 aaPredicted RBP16.95■□□□□ 0.3
SEC24D-202ENST00000419654 UBXN6Q9BZV1 441 aa16.95■□□□□ 0.3
SEC24D-202ENST00000419654 GINM1Q9NU53 330 aa16.95■□□□□ 0.3
SEC24D-202ENST00000419654 LMAN1P49257 510 aa16.94■□□□□ 0.3
SEC24D-202ENST00000419654 HNRNPH2P55795 449 aaKnown RBP16.94■□□□□ 0.3
SEC24D-202ENST00000419654 CCDC102AQ96A19 550 aa16.94■□□□□ 0.3
SEC24D-202ENST00000419654 DHTKD1Q96HY7 919 aaPredicted RBP16.94■□□□□ 0.3
SEC24D-202ENST00000419654 BLOC1S4Q9NUP1 217 aa16.94■□□□□ 0.3
SEC24D-202ENST00000419654 SV2BQ7L1I2 683 aa16.94■□□□□ 0.3
SEC24D-202ENST00000419654 CCDC47Q96A33 483 aaKnown RBP16.94■□□□□ 0.3
SEC24D-202ENST00000419654 PNMA5Q96PV4 448 aa16.94■□□□□ 0.3
SEC24D-202ENST00000419654 JADE2Q9NQC1 790 aa16.94■□□□□ 0.3
SEC24D-202ENST00000419654 ZNHIT6Q9NWK9 470 aaKnown RBP16.94■□□□□ 0.3
SEC24D-202ENST00000419654 ZNF263O14978 683 aa16.94■□□□□ 0.3
SEC24D-202ENST00000419654 ECM1Q16610 540 aa16.94■□□□□ 0.3
SEC24D-202ENST00000419654 WHAMMP3Q1A5X7 153 aa16.94■□□□□ 0.3
SEC24D-202ENST00000419654 GPC2Q8N158 579 aa16.94■□□□□ 0.3
SEC24D-202ENST00000419654 CAGE1Q8TC20 777 aa16.94■□□□□ 0.3
SEC24D-202ENST00000419654 CHURC1Q8WUH1 139 aa16.94■□□□□ 0.3
SEC24D-202ENST00000419654 FHDC1Q9C0D6 1143 aaPredicted RBP16.94■□□□□ 0.3
SEC24D-202ENST00000419654 MLXIPQ9HAP2 919 aa16.94■□□□□ 0.3
SEC24D-202ENST00000419654 SMARCAL1Q9NZC9 954 aa16.94■□□□□ 0.3
SEC24D-202ENST00000419654 GPRC5DQ9NZD1 345 aa16.94■□□□□ 0.3
SEC24D-202ENST00000419654 A0A1W2PQC6 194 aa16.93■□□□□ 0.3
SEC24D-202ENST00000419654 CTNND1O60716 968 aaKnown RBP16.93■□□□□ 0.3
SEC24D-202ENST00000419654 GCFC2P16383 781 aaKnown RBP16.93■□□□□ 0.3
SEC24D-202ENST00000419654 APBA1Q02410 837 aa16.93■□□□□ 0.3
SEC24D-202ENST00000419654 AP3B2Q13367 1082 aa16.93■□□□□ 0.3
SEC24D-202ENST00000419654 ENOX2Q16206 610 aaKnown RBP16.93■□□□□ 0.3
SEC24D-202ENST00000419654 MCTP2Q6DN12 878 aa16.93■□□□□ 0.3
SEC24D-202ENST00000419654 CCDC84Q86UT8 332 aaPredicted RBP16.93■□□□□ 0.3
SEC24D-202ENST00000419654 MSANTD4Q8NCY6 345 aa16.93■□□□□ 0.3
SEC24D-202ENST00000419654 SNX29Q8TEQ0 813 aa16.93■□□□□ 0.3
SEC24D-202ENST00000419654 C7orf25Q9BPX7 421 aa16.93■□□□□ 0.3
SEC24D-202ENST00000419654 TANGO6Q9C0B7 1094 aa16.93■□□□□ 0.3
SEC24D-202ENST00000419654 TTYH3Q9C0H2 523 aa16.93■□□□□ 0.3
SEC24D-202ENST00000419654 HAUS4Q9H6D7 363 aa16.93■□□□□ 0.3
SEC24D-202ENST00000419654 SRCAPQ6ZRS2 3230 aa16.93■□□□□ 0.3
SEC24D-202ENST00000419654 OPLAHO14841 1288 aa16.93■□□□□ 0.3
SEC24D-202ENST00000419654 MARCH6O60337 910 aa16.93■□□□□ 0.3
SEC24D-202ENST00000419654 TNNT3P45378 269 aaPredicted RBP16.93■□□□□ 0.3
SEC24D-202ENST00000419654 FXR2P51116 673 aaKnown RBP eCLIP16.93■□□□□ 0.36e-9■■■□□ 18.8
SEC24D-202ENST00000419654 USH1GQ495M9 461 aa16.93■□□□□ 0.3
SEC24D-202ENST00000419654 RANBP17Q9H2T7 1088 aaKnown RBP16.93■□□□□ 0.3
SEC24D-202ENST00000419654 ADAM21Q9UKJ8 722 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms