RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 DEFB128Q7Z7B8 93 aa11.05□□□□□ -0.64
CTSA-205ENST00000419493 TRIM22Q8IYM9 498 aa11.05□□□□□ -0.64
CTSA-205ENST00000419493 CCDC155Q8N6L0 562 aa11.05□□□□□ -0.64
CTSA-205ENST00000419493 ZNF274Q96GC6 653 aaPredicted RBP11.05□□□□□ -0.64
CTSA-205ENST00000419493 FAM161BQ96MY7 647 aa11.05□□□□□ -0.64
CTSA-205ENST00000419493 SENP7Q9BQF6 1050 aa11.05□□□□□ -0.64
CTSA-205ENST00000419493 RNF26Q9BY78 433 aaPredicted RBP11.05□□□□□ -0.64
CTSA-205ENST00000419493 ANO3Q9BYT9 981 aa11.05□□□□□ -0.64
CTSA-205ENST00000419493 FTOQ9C0B1 505 aaKnown RBP eCLIP11.05□□□□□ -0.64
CTSA-205ENST00000419493 MTIF3Q9H2K0 278 aaKnown RBP11.05□□□□□ -0.64
CTSA-205ENST00000419493 TUT1Q9H6E5 874 aaKnown RBP11.05□□□□□ -0.64
CTSA-205ENST00000419493 GTF2IRD1Q9UHL9 959 aa11.05□□□□□ -0.64
CTSA-205ENST00000419493 ZBBXA8MT70 800 aa11.04□□□□□ -0.64
CTSA-205ENST00000419493 ATP9AO75110 1047 aa11.04□□□□□ -0.64
CTSA-205ENST00000419493 F2P00734 622 aa11.04□□□□□ -0.64
CTSA-205ENST00000419493 LGALS2P05162 132 aa11.04□□□□□ -0.64
CTSA-205ENST00000419493 IFNAR1P17181 557 aa11.04□□□□□ -0.64
CTSA-205ENST00000419493 EVCP57679 992 aa11.04□□□□□ -0.64
CTSA-205ENST00000419493 SEMA3FQ13275 785 aa11.04□□□□□ -0.64
CTSA-205ENST00000419493 AP3B2Q13367 1082 aa11.04□□□□□ -0.64
CTSA-205ENST00000419493 NTRK3Q16288 839 aa11.04□□□□□ -0.64
CTSA-205ENST00000419493 PKN1Q16512 942 aa11.04□□□□□ -0.64
CTSA-205ENST00000419493 ZNF697Q5TEC3 545 aa11.04□□□□□ -0.64
CTSA-205ENST00000419493 CCDC148Q8NFR7 591 aa11.04□□□□□ -0.64
CTSA-205ENST00000419493 GPR20Q99678 358 aa11.04□□□□□ -0.64
CTSA-205ENST00000419493 MXRA8Q9BRK3 442 aa11.04□□□□□ -0.64
CTSA-205ENST00000419493 C16orf70Q9BSU1 422 aa11.04□□□□□ -0.64
CTSA-205ENST00000419493 WNT8AQ9H1J5 351 aa11.04□□□□□ -0.64
CTSA-205ENST00000419493 SLKQ9H2G2 1235 aaPredicted RBP11.04□□□□□ -0.64
CTSA-205ENST00000419493 JADE2Q9NQC1 790 aa11.04□□□□□ -0.64
CTSA-205ENST00000419493 ZNF215Q9UL58 517 aaPredicted RBP11.04□□□□□ -0.64
CTSA-205ENST00000419493 UBIAD1Q9Y5Z9 338 aa11.04□□□□□ -0.64
CTSA-205ENST00000419493 SCN10AQ9Y5Y9 1956 aa11.03□□□□□ -0.64
CTSA-205ENST00000419493 C17orf102A2RUQ5 167 aa11.03□□□□□ -0.64
CTSA-205ENST00000419493 HAS3O00219 553 aa11.03□□□□□ -0.64
CTSA-205ENST00000419493 IQCF3P0C7M6 154 aa11.03□□□□□ -0.64
CTSA-205ENST00000419493 HOXD8P13378 290 aaPredicted RBP11.03□□□□□ -0.64
CTSA-205ENST00000419493 TCF7P36402 384 aaPredicted RBP11.03□□□□□ -0.64
CTSA-205ENST00000419493 NLRP5P59047 1200 aa11.03□□□□□ -0.64
CTSA-205ENST00000419493 ANAPC15P60006 121 aa11.03□□□□□ -0.64
CTSA-205ENST00000419493 SMAD3P84022 425 aaKnown RBP11.03□□□□□ -0.64
CTSA-205ENST00000419493 ZNF200P98182 395 aaPredicted RBP11.03□□□□□ -0.64
CTSA-205ENST00000419493 MCTP2Q6DN12 878 aa11.03□□□□□ -0.64
CTSA-205ENST00000419493 SESTD1Q86VW0 696 aa11.03□□□□□ -0.64
CTSA-205ENST00000419493 TEX2Q8IWB9 1127 aa11.03□□□□□ -0.64
CTSA-205ENST00000419493 REXO1Q8N1G1 1221 aaKnown RBP11.03□□□□□ -0.64
CTSA-205ENST00000419493 CYP2W1Q8TAV3 490 aa11.03□□□□□ -0.64
CTSA-205ENST00000419493 CAGE1Q8TC20 777 aa11.03□□□□□ -0.64
CTSA-205ENST00000419493 BICD2Q8TD16 824 aa11.03□□□□□ -0.64
CTSA-205ENST00000419493 SEPT1Q8WYJ6 367 aa11.03□□□□□ -0.64
CTSA-205ENST00000419493 SDF4Q9BRK5 362 aa11.03□□□□□ -0.64
CTSA-205ENST00000419493 ZMYND12Q9H0C1 365 aa11.03□□□□□ -0.64
CTSA-205ENST00000419493 KCNH7Q9NS40 1196 aa11.03□□□□□ -0.64
CTSA-205ENST00000419493 VPS54Q9P1Q0 977 aa11.03□□□□□ -0.64
CTSA-205ENST00000419493 ESYT2A0FGR8 921 aa11.02□□□□□ -0.65
CTSA-205ENST00000419493 PITPNM1O00562 1244 aa11.02□□□□□ -0.65
CTSA-205ENST00000419493 PFKMP08237 780 aa11.02□□□□□ -0.65
CTSA-205ENST00000419493 SMIM10L2AP0DMW4 78 aa11.02□□□□□ -0.65
CTSA-205ENST00000419493 SMIM10L2BP0DMW5 78 aa11.02□□□□□ -0.65
CTSA-205ENST00000419493 ACTN1P12814 892 aa11.02□□□□□ -0.65
CTSA-205ENST00000419493 KCNA2P16389 499 aa11.02□□□□□ -0.65
CTSA-205ENST00000419493 CLK2P49760 499 aaKnown RBP11.02□□□□□ -0.65
CTSA-205ENST00000419493 ARHGAP4P98171 946 aa11.02□□□□□ -0.65
CTSA-205ENST00000419493 PTK7Q13308 1070 aa11.02□□□□□ -0.65
CTSA-205ENST00000419493 ANKRD1Q15327 319 aa11.02□□□□□ -0.65
CTSA-205ENST00000419493 CEP55Q53EZ4 464 aa11.02□□□□□ -0.65
CTSA-205ENST00000419493 PLA2G4DQ86XP0 818 aa11.02□□□□□ -0.65
CTSA-205ENST00000419493 TRIM50Q86XT4 487 aa11.02□□□□□ -0.65
CTSA-205ENST00000419493 AFAP1L1Q8TED9 768 aa11.02□□□□□ -0.65
CTSA-205ENST00000419493 HERVK_113Q902F9 699 aa11.02□□□□□ -0.65
CTSA-205ENST00000419493 GLG1Q92896 1179 aa11.02□□□□□ -0.65
CTSA-205ENST00000419493 ATP6V0A1Q93050 837 aa11.02□□□□□ -0.65
CTSA-205ENST00000419493 RNPEPQ9H4A4 650 aa11.02□□□□□ -0.65
CTSA-205ENST00000419493 SLC9A2Q9UBY0 812 aa11.02□□□□□ -0.65
CTSA-205ENST00000419493 TELO2Q9Y4R8 837 aa11.02□□□□□ -0.65
CTSA-205ENST00000419493 NID2Q14112 1375 aa11.02□□□□□ -0.65
CTSA-205ENST00000419493 GRXCR1A8MXD5 290 aa11.01□□□□□ -0.65
CTSA-205ENST00000419493 DDX39AO00148 427 aaKnown RBP11.01□□□□□ -0.65
CTSA-205ENST00000419493 CDKL5O76039 1030 aa11.01□□□□□ -0.65
CTSA-205ENST00000419493 DEXIO95424 95 aa11.01□□□□□ -0.65
CTSA-205ENST00000419493 ARP10275 920 aa11.01□□□□□ -0.65
CTSA-205ENST00000419493 GNAT1P11488 350 aa11.01□□□□□ -0.65
CTSA-205ENST00000419493 CKBP12277 381 aa11.01□□□□□ -0.65
CTSA-205ENST00000419493 SELPP16109 830 aa11.01□□□□□ -0.65
CTSA-205ENST00000419493 MARK3P27448 753 aa11.01□□□□□ -0.65
CTSA-205ENST00000419493 RFC2P35250 354 aa11.01□□□□□ -0.65
CTSA-205ENST00000419493 SREBF1P36956 1147 aa11.01□□□□□ -0.65
CTSA-205ENST00000419493 NEK4P51957 841 aa11.01□□□□□ -0.65
CTSA-205ENST00000419493 FAM109BQ6ICB4 259 aaPredicted RBP11.01□□□□□ -0.65
CTSA-205ENST00000419493 LRRC8DQ7L1W4 858 aa11.01□□□□□ -0.65
CTSA-205ENST00000419493 RASGRP4Q8TDF6 673 aa11.01□□□□□ -0.65
CTSA-205ENST00000419493 UIMC1Q96RL1 719 aa11.01□□□□□ -0.65
CTSA-205ENST00000419493 AZI2Q9H6S1 392 aa11.01□□□□□ -0.65
CTSA-205ENST00000419493 JPH1Q9HDC5 661 aaPredicted RBP11.01□□□□□ -0.65
CTSA-205ENST00000419493 SH3GLB2Q9NR46 395 aa11.01□□□□□ -0.65
CTSA-205ENST00000419493 SETD4Q9NVD3 440 aa11.01□□□□□ -0.65
CTSA-205ENST00000419493 MTMR10Q9NXD2 777 aa11.01□□□□□ -0.65
CTSA-205ENST00000419493 CXXC1Q9P0U4 656 aaPredicted RBP11.01□□□□□ -0.65
CTSA-205ENST00000419493 SLC4A7Q9Y6M7 1214 aa11.01□□□□□ -0.65
CTSA-205ENST00000419493 DOCK5Q9H7D0 1870 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms