RNA–Protein interactions for RNA: ENST00000417709.5

TTC38-202, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-202ENST00000417709 SMIM10L2BP0DMW5 78 aa16.52■□□□□ 0.24
TTC38-202ENST00000417709 HOXD8P13378 290 aaPredicted RBP16.52■□□□□ 0.24
TTC38-202ENST00000417709 HSD17B4P51659 736 aa16.52■□□□□ 0.24
TTC38-202ENST00000417709 MKRN4PQ13434 485 aaPredicted RBP16.52■□□□□ 0.24
TTC38-202ENST00000417709 CLUL1Q15846 466 aa16.52■□□□□ 0.24
TTC38-202ENST00000417709 TIGD5Q53EQ6 642 aa16.52■□□□□ 0.24
TTC38-202ENST00000417709 STOX1Q6ZVD7 989 aa16.52■□□□□ 0.24
TTC38-202ENST00000417709 STAG2Q8N3U4 1231 aa16.52■□□□□ 0.24
TTC38-202ENST00000417709 ENAHQ8N8S7 591 aaPredicted RBP16.52■□□□□ 0.24
TTC38-202ENST00000417709 FBXL18Q96ME1 805 aa16.52■□□□□ 0.24
TTC38-202ENST00000417709 SETD4Q9NVD3 440 aa16.52■□□□□ 0.24
TTC38-202ENST00000417709 FAM50BQ9Y247 325 aa16.52■□□□□ 0.24
TTC38-202ENST00000417709 PCDHA1Q9Y5I3 950 aa16.52■□□□□ 0.24
TTC38-202ENST00000417709 NLRC5Q86WI3 1866 aa16.51■□□□□ 0.23
TTC38-202ENST00000417709 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.51■□□□□ 0.23
TTC38-202ENST00000417709 TGFB3P10600 412 aa16.51■□□□□ 0.23
TTC38-202ENST00000417709 MFAP1P55081 439 aaKnown RBP16.51■□□□□ 0.23
TTC38-202ENST00000417709 NHLH1Q02575 133 aa16.51■□□□□ 0.23
TTC38-202ENST00000417709 PGM5Q15124 567 aa16.51■□□□□ 0.23
TTC38-202ENST00000417709 FCHSD1Q86WN1 690 aa16.51■□□□□ 0.23
TTC38-202ENST00000417709 IL31RAQ8NI17 732 aa16.51■□□□□ 0.23
TTC38-202ENST00000417709 IL17RAQ96F46 866 aa16.51■□□□□ 0.23
TTC38-202ENST00000417709 IFIH1Q9BYX4 1025 aaKnown RBP16.51■□□□□ 0.23
TTC38-202ENST00000417709 NSUN3Q9H649 340 aaKnown RBP16.51■□□□□ 0.23
TTC38-202ENST00000417709 ZNF318Q5VUA4 2279 aa16.5■□□□□ 0.23
TTC38-202ENST00000417709 USP34Q70CQ2 3546 aa16.5■□□□□ 0.23
TTC38-202ENST00000417709 KLRF2D3W0D1 207 aa16.5■□□□□ 0.23
TTC38-202ENST00000417709 PPP1R11O60927 126 aaPredicted RBP16.5■□□□□ 0.23
TTC38-202ENST00000417709 SDSP20132 328 aa16.5■□□□□ 0.23
TTC38-202ENST00000417709 UBA1P22314 1058 aaKnown RBP16.5■□□□□ 0.23
TTC38-202ENST00000417709 LTBRP36941 435 aa16.5■□□□□ 0.23
TTC38-202ENST00000417709 ZP2Q05996 745 aa16.5■□□□□ 0.23
TTC38-202ENST00000417709 TICAM2Q86XR7 235 aa16.5■□□□□ 0.23
TTC38-202ENST00000417709 FIBCD1Q8N539 461 aa16.5■□□□□ 0.23
TTC38-202ENST00000417709 IGFLR1Q9H665 355 aa16.5■□□□□ 0.23
TTC38-202ENST00000417709 PRKAG3Q9UGI9 489 aa16.5■□□□□ 0.23
TTC38-202ENST00000417709 SPTBN4Q9H254 2564 aa16.49■□□□□ 0.23
TTC38-202ENST00000417709 ZDBF2Q9HCK1 2354 aa16.49■□□□□ 0.23
TTC38-202ENST00000417709 C19orf67A6NJJ6 358 aa16.49■□□□□ 0.23
TTC38-202ENST00000417709 CCND2P30279 289 aa16.49■□□□□ 0.23
TTC38-202ENST00000417709 IRS1P35568 1242 aa16.49■□□□□ 0.23
TTC38-202ENST00000417709 CWC27Q6UX04 472 aaKnown RBP16.49■□□□□ 0.23
TTC38-202ENST00000417709 ADHFE1Q8IWW8 467 aa16.49■□□□□ 0.23
TTC38-202ENST00000417709 UPF3BQ9BZI7 483 aaKnown RBP16.49■□□□□ 0.23
TTC38-202ENST00000417709 DOCK5Q9H7D0 1870 aa16.48■□□□□ 0.23
TTC38-202ENST00000417709 GCOM1H8Y6P7 765 aaPredicted RBP16.48■□□□□ 0.23
TTC38-202ENST00000417709 NOP56O00567 594 aaKnown RBP16.48■□□□□ 0.23
TTC38-202ENST00000417709 GRM6O15303 877 aa16.48■□□□□ 0.23
TTC38-202ENST00000417709 CSPG5O95196 566 aa16.48■□□□□ 0.23
TTC38-202ENST00000417709 LGALS2P05162 132 aa16.48■□□□□ 0.23
TTC38-202ENST00000417709 POLR2MP0CAP2 368 aa16.48■□□□□ 0.23
TTC38-202ENST00000417709 CTNNB1P35222 781 aa16.48■□□□□ 0.23
TTC38-202ENST00000417709 DLX2Q07687 328 aaPredicted RBP16.48■□□□□ 0.23
TTC38-202ENST00000417709 UTP14CQ5TAP6 766 aaKnown RBP16.48■□□□□ 0.23
TTC38-202ENST00000417709 HFE2Q6ZVN8 426 aa16.48■□□□□ 0.23
TTC38-202ENST00000417709 CYFIP1Q7L576 1253 aa16.48■□□□□ 0.23
TTC38-202ENST00000417709 RPAINQ86UA6 219 aa16.48■□□□□ 0.23
TTC38-202ENST00000417709 UBAC1Q9BSL1 405 aa16.48■□□□□ 0.23
TTC38-202ENST00000417709 USP26Q9BXU7 913 aa16.48■□□□□ 0.23
TTC38-202ENST00000417709 LNPKQ9C0E8 428 aa16.48■□□□□ 0.23
TTC38-202ENST00000417709 MAP3K20Q9NYL2 800 aaKnown RBP16.48■□□□□ 0.23
TTC38-202ENST00000417709 TECTAO75443 2155 aa16.47■□□□□ 0.23
TTC38-202ENST00000417709 ZBTB5O15062 677 aa16.47■□□□□ 0.23
TTC38-202ENST00000417709 NCK2O43639 380 aa16.47■□□□□ 0.23
TTC38-202ENST00000417709 GNAT1P11488 350 aa16.47■□□□□ 0.23
TTC38-202ENST00000417709 BMPR1AP36894 532 aa16.47■□□□□ 0.23
TTC38-202ENST00000417709 COL19A1Q14993 1142 aa16.47■□□□□ 0.23
TTC38-202ENST00000417709 IFIT1BQ5T764 474 aaKnown RBP16.47■□□□□ 0.23
TTC38-202ENST00000417709 HOMER1Q86YM7 354 aa16.47■□□□□ 0.23
TTC38-202ENST00000417709 RTEL1Q9NZ71 1219 aa16.47■□□□□ 0.23
TTC38-202ENST00000417709 SUPT16HQ9Y5B9 1047 aaKnown RBP16.47■□□□□ 0.23
TTC38-202ENST00000417709 CFAP54Q96N23 3096 aa16.47■□□□□ 0.23
TTC38-202ENST00000417709 HOXC8P31273 242 aa16.46■□□□□ 0.23
TTC38-202ENST00000417709 GTF2F1P35269 517 aaKnown RBP eCLIP16.46■□□□□ 0.23
TTC38-202ENST00000417709 ARHGAP4P98171 946 aa16.46■□□□□ 0.23
TTC38-202ENST00000417709 GHRHRQ02643 423 aa16.46■□□□□ 0.23
TTC38-202ENST00000417709 HYAL1Q12794 435 aa16.46■□□□□ 0.23
TTC38-202ENST00000417709 B4GALNT3Q6L9W6 998 aa16.46■□□□□ 0.23
TTC38-202ENST00000417709 MFSD14AQ96MC6 490 aa16.46■□□□□ 0.23
TTC38-202ENST00000417709 PIGSQ96S52 555 aa16.46■□□□□ 0.23
TTC38-202ENST00000417709 KRT23Q9C075 422 aa16.46■□□□□ 0.23
TTC38-202ENST00000417709 MAD2L2Q9UI95 211 aa16.46■□□□□ 0.23
TTC38-202ENST00000417709 MUTYHQ9UIF7 546 aa16.46■□□□□ 0.23
TTC38-202ENST00000417709 TELO2Q9Y4R8 837 aa16.46■□□□□ 0.23
TTC38-202ENST00000417709 PTPRZ1P23471 2315 aaPredicted RBP16.46■□□□□ 0.23
TTC38-202ENST00000417709 ENPP3O14638 875 aa16.45■□□□□ 0.22
TTC38-202ENST00000417709 CHRNA1P02708 482 aa16.45■□□□□ 0.22
TTC38-202ENST00000417709 RB1P06400 928 aa16.45■□□□□ 0.22
TTC38-202ENST00000417709 SP4Q02446 784 aa16.45■□□□□ 0.22
TTC38-202ENST00000417709 SMAD2Q15796 467 aaKnown RBP16.45■□□□□ 0.22
TTC38-202ENST00000417709 IMMTQ16891 758 aaKnown RBP16.45■□□□□ 0.22
TTC38-202ENST00000417709 CTC1Q2NKJ3 1217 aa16.45■□□□□ 0.22
TTC38-202ENST00000417709 TRIM50Q86XT4 487 aa16.45■□□□□ 0.22
TTC38-202ENST00000417709 RNF135Q8IUD6 432 aa16.45■□□□□ 0.22
TTC38-202ENST00000417709 PIBF1Q8WXW3 757 aa16.45■□□□□ 0.22
TTC38-202ENST00000417709 APBB2Q92870 758 aa16.45■□□□□ 0.22
TTC38-202ENST00000417709 MTMR8Q96EF0 704 aa16.45■□□□□ 0.22
TTC38-202ENST00000417709 GPR20Q99678 358 aa16.45■□□□□ 0.22
TTC38-202ENST00000417709 ALG13Q9NP73 1137 aaKnown RBP16.45■□□□□ 0.22
TTC38-202ENST00000417709 PALM3A6NDB9 673 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms