RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 EARS2Q5JPH6 523 aaKnown RBP14.2□□□□□ -0.14
SKA1-203ENST00000417656 MYSM1Q5VVJ2 828 aa14.2□□□□□ -0.14
SKA1-203ENST00000417656 METTL7BQ6UX53 244 aa14.2□□□□□ -0.14
SKA1-203ENST00000417656 PIK3AP1Q6ZUJ8 805 aa14.2□□□□□ -0.14
SKA1-203ENST00000417656 CYFIP1Q7L576 1253 aa14.2□□□□□ -0.14
SKA1-203ENST00000417656 PLA2G4DQ86XP0 818 aa14.2□□□□□ -0.14
SKA1-203ENST00000417656 PPTC7Q8NI37 304 aa14.2□□□□□ -0.14
SKA1-203ENST00000417656 TNFRSF25Q93038 417 aa14.2□□□□□ -0.14
SKA1-203ENST00000417656 GLT1D1Q96MS3 346 aa14.2□□□□□ -0.14
SKA1-203ENST00000417656 UIMC1Q96RL1 719 aa14.2□□□□□ -0.14
SKA1-203ENST00000417656 MLXIPQ9HAP2 919 aa14.2□□□□□ -0.14
SKA1-203ENST00000417656 KCNH7Q9NS40 1196 aa14.2□□□□□ -0.14
SKA1-203ENST00000417656 POLR3EQ9NVU0 708 aa14.2□□□□□ -0.14
SKA1-203ENST00000417656 TELO2Q9Y4R8 837 aa14.2□□□□□ -0.14
SKA1-203ENST00000417656 BTBD18B2RXH4 712 aa14.19□□□□□ -0.14
SKA1-203ENST00000417656 K7ELQ4 463 aaPredicted RBP14.19□□□□□ -0.14
SKA1-203ENST00000417656 MEIS1O00470 390 aa14.19□□□□□ -0.14
SKA1-203ENST00000417656 TDP2O95551 362 aa14.19□□□□□ -0.14
SKA1-203ENST00000417656 ZNF286BP0CG31 522 aa14.19□□□□□ -0.14
SKA1-203ENST00000417656 GJB2P29033 226 aa14.19□□□□□ -0.14
SKA1-203ENST00000417656 CIITAP33076 1130 aa14.19□□□□□ -0.14
SKA1-203ENST00000417656 RTP1P59025 263 aa14.19□□□□□ -0.14
SKA1-203ENST00000417656 PSMC6P62333 389 aa14.19□□□□□ -0.14
SKA1-203ENST00000417656 SETQ01105 290 aaPredicted RBP14.19□□□□□ -0.14
SKA1-203ENST00000417656 SNX17Q15036 470 aa14.19□□□□□ -0.14
SKA1-203ENST00000417656 HSDL1Q3SXM5 330 aa14.19□□□□□ -0.14
SKA1-203ENST00000417656 TRIM60Q495X7 471 aa14.19□□□□□ -0.14
SKA1-203ENST00000417656 PRR16Q569H4 304 aa14.19□□□□□ -0.14
SKA1-203ENST00000417656 SLC39A5Q6ZMH5 540 aa14.19□□□□□ -0.14
SKA1-203ENST00000417656 NIPA1Q7RTP0 329 aa14.19□□□□□ -0.14
SKA1-203ENST00000417656 C7orf61Q8IZ16 206 aa14.19□□□□□ -0.14
SKA1-203ENST00000417656 LENG9Q96B70 501 aa14.19□□□□□ -0.14
SKA1-203ENST00000417656 SENP7Q9BQF6 1050 aa14.19□□□□□ -0.14
SKA1-203ENST00000417656 AGO4Q9HCK5 861 aaKnown RBP14.19□□□□□ -0.14
SKA1-203ENST00000417656 SMC3Q9UQE7 1217 aa14.19□□□□□ -0.14
SKA1-203ENST00000417656 A0A0U1RQG5 324 aaPredicted RBP14.18□□□□□ -0.14
SKA1-203ENST00000417656 NOP56O00567 594 aaKnown RBP14.18□□□□□ -0.14
SKA1-203ENST00000417656 CABYRO75952 493 aa14.18□□□□□ -0.14
SKA1-203ENST00000417656 ITGB3BPQ13352 177 aaPredicted RBP14.18□□□□□ -0.14
SKA1-203ENST00000417656 SAFBQ15424 915 aaKnown RBP eCLIP14.18□□□□□ -0.14
SKA1-203ENST00000417656 NEK8Q86SG6 692 aa14.18□□□□□ -0.14
SKA1-203ENST00000417656 HSCBQ8IWL3 235 aa14.18□□□□□ -0.14
SKA1-203ENST00000417656 FBXO18Q8NFZ0 1043 aa14.18□□□□□ -0.14
SKA1-203ENST00000417656 DPF3Q92784 378 aa14.18□□□□□ -0.14
SKA1-203ENST00000417656 SNX21Q969T3 373 aa14.18□□□□□ -0.14
SKA1-203ENST00000417656 VTI1AQ96AJ9 217 aa14.18□□□□□ -0.14
SKA1-203ENST00000417656 MTG1Q9BT17 334 aaPredicted RBP14.18□□□□□ -0.14
SKA1-203ENST00000417656 ATP11BQ9Y2G3 1177 aa14.18□□□□□ -0.14
SKA1-203ENST00000417656 KIF3AQ9Y496 699 aa14.18□□□□□ -0.14
SKA1-203ENST00000417656 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.18□□□□□ -0.14
SKA1-203ENST00000417656 ELP1O95163 1332 aa14.17□□□□□ -0.14
SKA1-203ENST00000417656 DDX39AO00148 427 aaKnown RBP14.17□□□□□ -0.14
SKA1-203ENST00000417656 MAFGO15525 162 aa14.17□□□□□ -0.14
SKA1-203ENST00000417656 EVI5O60447 810 aa14.17□□□□□ -0.14
SKA1-203ENST00000417656 HOXD8P13378 290 aaPredicted RBP14.17□□□□□ -0.14
SKA1-203ENST00000417656 USP11P51784 963 aa14.17□□□□□ -0.14
SKA1-203ENST00000417656 DGKDQ16760 1214 aa14.17□□□□□ -0.14
SKA1-203ENST00000417656 LETM2Q2VYF4 491 aa14.17□□□□□ -0.14
SKA1-203ENST00000417656 GIMAP8Q8ND71 665 aaPredicted RBP14.17□□□□□ -0.14
SKA1-203ENST00000417656 PPP1R13LQ8WUF5 828 aa14.17□□□□□ -0.14
SKA1-203ENST00000417656 GPR20Q99678 358 aa14.17□□□□□ -0.14
SKA1-203ENST00000417656 SDF4Q9BRK5 362 aa14.17□□□□□ -0.14
SKA1-203ENST00000417656 ZNF577Q9BSK1 485 aa14.17□□□□□ -0.14
SKA1-203ENST00000417656 JPH1Q9HDC5 661 aaPredicted RBP14.17□□□□□ -0.14
SKA1-203ENST00000417656 GRIN2DO15399 1336 aa14.16□□□□□ -0.14
SKA1-203ENST00000417656 NFASCO94856 1347 aa14.16□□□□□ -0.14
SKA1-203ENST00000417656 LTBP2Q14767 1821 aa14.16□□□□□ -0.14
SKA1-203ENST00000417656 KIF28PB7ZC32 967 aa14.16□□□□□ -0.14
SKA1-203ENST00000417656 SLC37A4O43826 429 aa14.16□□□□□ -0.14
SKA1-203ENST00000417656 KPNA6O60684 536 aa14.16□□□□□ -0.14
SKA1-203ENST00000417656 PQBP1O60828 265 aaKnown RBP14.16□□□□□ -0.14
SKA1-203ENST00000417656 F2P00734 622 aa14.16□□□□□ -0.14
SKA1-203ENST00000417656 LGALS2P05162 132 aa14.16□□□□□ -0.14
SKA1-203ENST00000417656 CHMP4BP1P59074 171 aa14.16□□□□□ -0.14
SKA1-203ENST00000417656 ITGA7Q13683 1181 aa14.16□□□□□ -0.14
SKA1-203ENST00000417656 MOXD1Q6UVY6 613 aa14.16□□□□□ -0.14
SKA1-203ENST00000417656 TRIM50Q86XT4 487 aa14.16□□□□□ -0.14
SKA1-203ENST00000417656 KAT2BQ92831 832 aa14.16□□□□□ -0.14
SKA1-203ENST00000417656 MBOAT7Q96N66 472 aa14.16□□□□□ -0.14
SKA1-203ENST00000417656 PCDH10Q9P2E7 1040 aa14.16□□□□□ -0.14
SKA1-203ENST00000417656 SLC9A2Q9UBY0 812 aa14.16□□□□□ -0.14
SKA1-203ENST00000417656 PDE4DIPQ5VU43 2346 aa14.16□□□□□ -0.14
SKA1-203ENST00000417656 ARVCFO00192 962 aa14.15□□□□□ -0.14
SKA1-203ENST00000417656 IPO5O00410 1097 aaKnown RBP14.15□□□□□ -0.14
SKA1-203ENST00000417656 WNT7AO00755 349 aa14.15□□□□□ -0.14
SKA1-203ENST00000417656 MSH4O15457 936 aa14.15□□□□□ -0.14
SKA1-203ENST00000417656 GNL2Q13823 731 aaKnown RBP14.15□□□□□ -0.14
SKA1-203ENST00000417656 Q4G0T1 1027 aa14.15□□□□□ -0.14
SKA1-203ENST00000417656 UTP14CQ5TAP6 766 aaKnown RBP14.15□□□□□ -0.14
SKA1-203ENST00000417656 C1orf53Q5VUE5 145 aa14.15□□□□□ -0.14
SKA1-203ENST00000417656 GJA10Q969M2 543 aa14.15□□□□□ -0.14
SKA1-203ENST00000417656 DDX25Q9UHL0 483 aaKnown RBP14.15□□□□□ -0.14
SKA1-203ENST00000417656 DNAH12Q6ZR08 3092 aa14.14□□□□□ -0.15
SKA1-203ENST00000417656 CYP3A7-CYP3A51PA0A087WV96 503 aa14.14□□□□□ -0.15
SKA1-203ENST00000417656 GSTTP1A0A1W2PQM5 241 aa14.14□□□□□ -0.15
SKA1-203ENST00000417656 DHX15O43143 795 aaKnown RBP14.14□□□□□ -0.15
SKA1-203ENST00000417656 CCNT1O60563 726 aaKnown RBP14.14□□□□□ -0.15
SKA1-203ENST00000417656 PPFIA4O75335 1185 aa14.14□□□□□ -0.15
SKA1-203ENST00000417656 CCNE2O96020 404 aa14.14□□□□□ -0.15
SKA1-203ENST00000417656 GCFC2P16383 781 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms