RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 ICAM3P32942 547 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 DDIT3P35638 169 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 ME1P48163 572 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 TRIM32Q13049 653 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 LY6KQ17RY6 165 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 TPRNQ4KMQ1 711 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 NCAPH2Q6IBW4 605 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 DTHD1Q6ZMT9 781 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 TLK2Q86UE8 772 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 CYP2W1Q8TAV3 490 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 USP28Q96RU2 1077 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 SCAND2PQ9GZW5 306 aaPredicted RBP9.56□□□□□ -0.88
TRIM48-201ENST00000417545 AGO4Q9HCK5 861 aaKnown RBP9.56□□□□□ -0.88
TRIM48-201ENST00000417545 JPH1Q9HDC5 661 aaPredicted RBP9.56□□□□□ -0.88
TRIM48-201ENST00000417545 PDGFCQ9NRA1 345 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.56□□□□□ -0.88
TRIM48-201ENST00000417545 ZDHHC9Q9Y397 364 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 CLIC4Q9Y696 253 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 TCHHQ07283 1943 aa9.55□□□□□ -0.88
TRIM48-201ENST00000417545 IGLV3-22A0A075B6J6 115 aa9.55□□□□□ -0.88
TRIM48-201ENST00000417545 SPATA31C2B4DYI2 1134 aa9.55□□□□□ -0.88
TRIM48-201ENST00000417545 SPTLC2O15270 562 aa9.55□□□□□ -0.88
TRIM48-201ENST00000417545 YEATS4O95619 227 aa9.55□□□□□ -0.88
TRIM48-201ENST00000417545 UBA1P22314 1058 aaKnown RBP9.55□□□□□ -0.88
TRIM48-201ENST00000417545 CCND3P30281 292 aaPredicted RBP9.55□□□□□ -0.88
TRIM48-201ENST00000417545 TXLNAP40222 546 aa9.55□□□□□ -0.88
TRIM48-201ENST00000417545 TOB1P50616 345 aaPredicted RBP9.55□□□□□ -0.88
TRIM48-201ENST00000417545 KRT76Q01546 638 aa9.55□□□□□ -0.88
TRIM48-201ENST00000417545 LAMC2Q13753 1193 aa9.55□□□□□ -0.88
TRIM48-201ENST00000417545 DUSP28Q4G0W2 176 aa9.55□□□□□ -0.88
TRIM48-201ENST00000417545 TAPT1Q6NXT6 567 aa9.55□□□□□ -0.88
TRIM48-201ENST00000417545 CYFIP1Q7L576 1253 aa9.55□□□□□ -0.88
TRIM48-201ENST00000417545 MIER3Q7Z3K6 550 aa9.55□□□□□ -0.88
TRIM48-201ENST00000417545 ZNF579Q8NAF0 562 aaKnown RBP9.55□□□□□ -0.88
TRIM48-201ENST00000417545 ERMNQ8TAM6 284 aa9.55□□□□□ -0.88
TRIM48-201ENST00000417545 KCNG4Q8TDN1 519 aa9.55□□□□□ -0.88
TRIM48-201ENST00000417545 CRYGNQ8WXF5 182 aa9.55□□□□□ -0.88
TRIM48-201ENST00000417545 SPATA33Q96N06 139 aa9.55□□□□□ -0.88
TRIM48-201ENST00000417545 RIT2Q99578 217 aa9.55□□□□□ -0.88
TRIM48-201ENST00000417545 FTOQ9C0B1 505 aaKnown RBP eCLIP9.55□□□□□ -0.88
TRIM48-201ENST00000417545 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.55□□□□□ -0.88
TRIM48-201ENST00000417545 RNF208Q9H0X6 261 aa9.55□□□□□ -0.88
TRIM48-201ENST00000417545 TTC12Q9H892 705 aaPredicted RBP9.55□□□□□ -0.88
TRIM48-201ENST00000417545 POLR3EQ9NVU0 708 aa9.55□□□□□ -0.88
TRIM48-201ENST00000417545 SLC9A2Q9UBY0 812 aa9.55□□□□□ -0.88
TRIM48-201ENST00000417545 PCDHA12Q9UN75 941 aa9.55□□□□□ -0.88
TRIM48-201ENST00000417545 CEP350Q5VT06 3117 aa9.54□□□□□ -0.88
TRIM48-201ENST00000417545 NFASCO94856 1347 aa9.54□□□□□ -0.88
TRIM48-201ENST00000417545 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.54□□□□□ -0.88
TRIM48-201ENST00000417545 VWA3AA6NCI4 1184 aa9.54□□□□□ -0.88
TRIM48-201ENST00000417545 POTEMA6NI47 508 aa9.54□□□□□ -0.88
TRIM48-201ENST00000417545 BACH1O14867 736 aa9.54□□□□□ -0.88
TRIM48-201ENST00000417545 DYNC1LI2O43237 492 aaPredicted RBP9.54□□□□□ -0.88
TRIM48-201ENST00000417545 ZEB2O60315 1214 aa9.54□□□□□ -0.88
TRIM48-201ENST00000417545 C6orf222P0C671 652 aaPredicted RBP9.54□□□□□ -0.88
TRIM48-201ENST00000417545 ZNF865P0CJ78 1059 aaPredicted RBP9.54□□□□□ -0.88
TRIM48-201ENST00000417545 CCL5P13501 91 aa9.54□□□□□ -0.88
TRIM48-201ENST00000417545 MARCKSP29966 332 aaPredicted RBP9.54□□□□□ -0.88
TRIM48-201ENST00000417545 PRPHP41219 470 aa9.54□□□□□ -0.88
TRIM48-201ENST00000417545 CPT1AP50416 773 aa9.54□□□□□ -0.88
TRIM48-201ENST00000417545 JAK3P52333 1124 aa9.54□□□□□ -0.88
TRIM48-201ENST00000417545 ATP2C1P98194 919 aaPredicted RBP9.54□□□□□ -0.88
TRIM48-201ENST00000417545 ARL6IP4Q66PJ3 421 aaKnown RBP9.54□□□□□ -0.88
TRIM48-201ENST00000417545 KRI1Q8N9T8 703 aaKnown RBP9.54□□□□□ -0.88
TRIM48-201ENST00000417545 COPS5Q92905 334 aa9.54□□□□□ -0.88
TRIM48-201ENST00000417545 SLC5A5Q92911 643 aa9.54□□□□□ -0.88
TRIM48-201ENST00000417545 TNPO1Q92973 898 aaKnown RBP9.54□□□□□ -0.88
TRIM48-201ENST00000417545 FERMT2Q96AC1 680 aa9.54□□□□□ -0.88
TRIM48-201ENST00000417545 CDK5RAP3Q96JB5 506 aa9.54□□□□□ -0.88
TRIM48-201ENST00000417545 CCDC43Q96MW1 224 aaKnown RBP9.54□□□□□ -0.88
TRIM48-201ENST00000417545 MBOAT7Q96N66 472 aa9.54□□□□□ -0.88
TRIM48-201ENST00000417545 SENP7Q9BQF6 1050 aa9.54□□□□□ -0.88
TRIM48-201ENST00000417545 TMEM106CQ9BVX2 250 aa9.54□□□□□ -0.88
TRIM48-201ENST00000417545 MCOLN1Q9GZU1 580 aa9.54□□□□□ -0.88
TRIM48-201ENST00000417545 XPNPEP3Q9NQH7 507 aa9.54□□□□□ -0.88
TRIM48-201ENST00000417545 DDX20Q9UHI6 824 aaKnown RBP9.54□□□□□ -0.88
TRIM48-201ENST00000417545 DDX41Q9UJV9 622 aaKnown RBP9.54□□□□□ -0.88
TRIM48-201ENST00000417545 STK24Q9Y6E0 443 aa9.54□□□□□ -0.88
TRIM48-201ENST00000417545 FRMPD3Q5JV73 1810 aa9.53□□□□□ -0.88
TRIM48-201ENST00000417545 ELP1O95163 1332 aa9.53□□□□□ -0.88
TRIM48-201ENST00000417545 RBM47A0AV96 593 aaKnown RBP9.53□□□□□ -0.88
TRIM48-201ENST00000417545 WDR64B1ANS9 1081 aa9.53□□□□□ -0.88
TRIM48-201ENST00000417545 KBTBD13C9JR72 458 aa9.53□□□□□ -0.88
TRIM48-201ENST00000417545 WNT7AO00755 349 aa9.53□□□□□ -0.88
TRIM48-201ENST00000417545 DUSP11O75319 330 aaKnown RBP9.53□□□□□ -0.88
TRIM48-201ENST00000417545 RGS20O76081 388 aa9.53□□□□□ -0.88
TRIM48-201ENST00000417545 ARIH2O95376 493 aa9.53□□□□□ -0.88
TRIM48-201ENST00000417545 PSAPP07602 524 aa9.53□□□□□ -0.88
TRIM48-201ENST00000417545 KCNA2P16389 499 aa9.53□□□□□ -0.88
TRIM48-201ENST00000417545 SMPD1P17405 629 aa9.53□□□□□ -0.88
TRIM48-201ENST00000417545 SFNP31947 248 aa9.53□□□□□ -0.88
TRIM48-201ENST00000417545 TECP42680 631 aa9.53□□□□□ -0.88
TRIM48-201ENST00000417545 NASPP49321 788 aaPredicted RBP9.53□□□□□ -0.88
TRIM48-201ENST00000417545 CHMP4BP1P59074 171 aa9.53□□□□□ -0.88
TRIM48-201ENST00000417545 SEMA3FQ13275 785 aa9.53□□□□□ -0.88
TRIM48-201ENST00000417545 SLC39A14Q15043 492 aa9.53□□□□□ -0.88
TRIM48-201ENST00000417545 ZRSR1Q15695 479 aaKnown RBP9.53□□□□□ -0.88
TRIM48-201ENST00000417545 CELF3Q5SZQ8 465 aaKnown RBP9.53□□□□□ -0.88
TRIM48-201ENST00000417545 GJC2Q5T442 439 aaPredicted RBP9.53□□□□□ -0.88
TRIM48-201ENST00000417545 FAM160B1Q5W0V3 765 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms