RNA–Protein interactions for RNA: ENST00000416585.1

SNX30-202, Transcript of sorting nexin family member 30, humanhuman

TSL 3

Gene SNX30, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-202ENST00000416585 SEPT8Q92599 483 aa13.09□□□□□ -0.31
SNX30-202ENST00000416585 INSL6Q9Y581 213 aa13.09□□□□□ -0.31
SNX30-202ENST00000416585 ATG2AQ2TAZ0 1938 aa13.09□□□□□ -0.31
SNX30-202ENST00000416585 LCHNA4D1U4 455 aa13.08□□□□□ -0.32
SNX30-202ENST00000416585 SGSM2O43147 1006 aa13.08□□□□□ -0.32
SNX30-202ENST00000416585 CYTH3O43739 400 aa13.08□□□□□ -0.32
SNX30-202ENST00000416585 CAND2O75155 1236 aa13.08□□□□□ -0.32
SNX30-202ENST00000416585 CALM1P0DP23 149 aa13.08□□□□□ -0.32
SNX30-202ENST00000416585 CALM2P0DP24 149 aa13.08□□□□□ -0.32
SNX30-202ENST00000416585 CALM3P0DP25 149 aa13.08□□□□□ -0.32
SNX30-202ENST00000416585 ICAM3P32942 547 aa13.08□□□□□ -0.32
SNX30-202ENST00000416585 SP4Q02446 784 aa13.08□□□□□ -0.32
SNX30-202ENST00000416585 TROAPQ12815 778 aa13.08□□□□□ -0.32
SNX30-202ENST00000416585 TRIM71Q2Q1W2 868 aaKnown RBP13.08□□□□□ -0.32
SNX30-202ENST00000416585 UTP14CQ5TAP6 766 aaKnown RBP13.08□□□□□ -0.32
SNX30-202ENST00000416585 CYFIP1Q7L576 1253 aa13.08□□□□□ -0.32
SNX30-202ENST00000416585 ZNF654Q8IZM8 581 aa13.08□□□□□ -0.32
SNX30-202ENST00000416585 TMTC2Q8N394 836 aa13.08□□□□□ -0.32
SNX30-202ENST00000416585 FBXO22Q8NEZ5 403 aa13.08□□□□□ -0.32
SNX30-202ENST00000416585 MAP3K14Q99558 947 aa13.08□□□□□ -0.32
SNX30-202ENST00000416585 LZTS2Q9BRK4 669 aa13.08□□□□□ -0.32
SNX30-202ENST00000416585 C16orf70Q9BSU1 422 aa13.08□□□□□ -0.32
SNX30-202ENST00000416585 SPZ1Q9BXG8 430 aa13.08□□□□□ -0.32
SNX30-202ENST00000416585 EHMT1Q9H9B1 1298 aa13.08□□□□□ -0.32
SNX30-202ENST00000416585 RTEL1Q9NZ71 1219 aa13.08□□□□□ -0.32
SNX30-202ENST00000416585 RBM8AQ9Y5S9 174 aaKnown RBP13.08□□□□□ -0.32
SNX30-202ENST00000416585 KIAA1671Q9BY89 1806 aa13.08□□□□□ -0.32
SNX30-202ENST00000416585 WDR81Q562E7 1941 aa13.07□□□□□ -0.32
SNX30-202ENST00000416585 EVPLQ92817 2033 aa13.07□□□□□ -0.32
SNX30-202ENST00000416585 LINC01553A4QN01 128 aa13.07□□□□□ -0.32
SNX30-202ENST00000416585 ARHGEF15O94989 841 aa13.07□□□□□ -0.32
SNX30-202ENST00000416585 CTSHP09668 335 aa13.07□□□□□ -0.32
SNX30-202ENST00000416585 BMP1P13497 986 aa13.07□□□□□ -0.32
SNX30-202ENST00000416585 MCM5P33992 734 aa13.07□□□□□ -0.32
SNX30-202ENST00000416585 ERVK-21P61565 698 aa13.07□□□□□ -0.32
SNX30-202ENST00000416585 SP2Q02086 613 aa13.07□□□□□ -0.32
SNX30-202ENST00000416585 GPNMBQ14956 572 aa13.07□□□□□ -0.32
SNX30-202ENST00000416585 PCNX4Q63HM2 1172 aa13.07□□□□□ -0.32
SNX30-202ENST00000416585 XRRA1Q6P2D8 792 aa13.07□□□□□ -0.32
SNX30-202ENST00000416585 DBF4BQ8NFT6 615 aa13.07□□□□□ -0.32
SNX30-202ENST00000416585 GPKOWQ92917 476 aaPredicted RBP eCLIP13.07□□□□□ -0.32
SNX30-202ENST00000416585 WNT8BQ93098 351 aa13.07□□□□□ -0.32
SNX30-202ENST00000416585 CDHR1Q96JP9 859 aa13.07□□□□□ -0.32
SNX30-202ENST00000416585 SAMD11Q96NU1 681 aa13.07□□□□□ -0.32
SNX30-202ENST00000416585 NECAB3Q96P71 396 aaPredicted RBP13.07□□□□□ -0.32
SNX30-202ENST00000416585 INPP4AQ96PE3 977 aaPredicted RBP13.07□□□□□ -0.32
SNX30-202ENST00000416585 YME1L1Q96TA2 773 aa13.07□□□□□ -0.32
SNX30-202ENST00000416585 C1QTNF1Q9BXJ1 281 aa13.07□□□□□ -0.32
SNX30-202ENST00000416585 SENP2Q9HC62 589 aa13.07□□□□□ -0.32
SNX30-202ENST00000416585 FRMPD4Q14CM0 1322 aa13.07□□□□□ -0.32
SNX30-202ENST00000416585 NCOR1O75376 2440 aa13.07□□□□□ -0.32
SNX30-202ENST00000416585 SPATA31C2B4DYI2 1134 aa13.06□□□□□ -0.32
SNX30-202ENST00000416585 TREHO43280 583 aa13.06□□□□□ -0.32
SNX30-202ENST00000416585 PRC1O43663 620 aa13.06□□□□□ -0.32
SNX30-202ENST00000416585 SMARCA1P28370 1054 aa13.06□□□□□ -0.32
SNX30-202ENST00000416585 MRPS9P82933 396 aaKnown RBP13.06□□□□□ -0.32
SNX30-202ENST00000416585 ARHGAP4P98171 946 aa13.06□□□□□ -0.32
SNX30-202ENST00000416585 PTPROQ16827 1216 aa13.06□□□□□ -0.32
SNX30-202ENST00000416585 PLEKHG4Q58EX7 1191 aa13.06□□□□□ -0.32
SNX30-202ENST00000416585 SYNE3Q6ZMZ3 975 aa13.06□□□□□ -0.32
SNX30-202ENST00000416585 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.06□□□□□ -0.32
SNX30-202ENST00000416585 RSPH3Q86UC2 560 aa13.06□□□□□ -0.32
SNX30-202ENST00000416585 MB21D2Q8IYB1 491 aaPredicted RBP13.06□□□□□ -0.32
SNX30-202ENST00000416585 APBB2Q92870 758 aa13.06□□□□□ -0.32
SNX30-202ENST00000416585 TMEM87BQ96K49 555 aa13.06□□□□□ -0.32
SNX30-202ENST00000416585 GPR20Q99678 358 aa13.06□□□□□ -0.32
SNX30-202ENST00000416585 MTA3Q9BTC8 594 aa13.06□□□□□ -0.32
SNX30-202ENST00000416585 MYL10Q9BUA6 226 aa13.06□□□□□ -0.32
SNX30-202ENST00000416585 RNPEPQ9H4A4 650 aa13.06□□□□□ -0.32
SNX30-202ENST00000416585 CHD9Q3L8U1 2897 aa13.05□□□□□ -0.32
SNX30-202ENST00000416585 SPDYE3A6NKU9 549 aa13.05□□□□□ -0.32
SNX30-202ENST00000416585 UPP2O95045 317 aa13.05□□□□□ -0.32
SNX30-202ENST00000416585 MBTPS1Q14703 1052 aa13.05□□□□□ -0.32
SNX30-202ENST00000416585 TCTN1Q2MV58 587 aa13.05□□□□□ -0.32
SNX30-202ENST00000416585 USP17L6PQ6QN14 398 aa13.05□□□□□ -0.32
SNX30-202ENST00000416585 SPRED2Q7Z698 418 aa13.05□□□□□ -0.32
SNX30-202ENST00000416585 IGDCC4Q8TDY8 1250 aa13.05□□□□□ -0.32
SNX30-202ENST00000416585 MAP4K1Q92918 833 aa13.05□□□□□ -0.32
SNX30-202ENST00000416585 SENP7Q9BQF6 1050 aa13.05□□□□□ -0.32
SNX30-202ENST00000416585 SUGCTQ9HAC7 445 aa13.05□□□□□ -0.32
SNX30-202ENST00000416585 LY9Q9HBG7 655 aa13.05□□□□□ -0.32
SNX30-202ENST00000416585 SETD4Q9NVD3 440 aa13.05□□□□□ -0.32
SNX30-202ENST00000416585 COL4A6Q14031 1691 aa13.05□□□□□ -0.32
SNX30-202ENST00000416585 CHD7Q9P2D1 2997 aa13.04□□□□□ -0.32
SNX30-202ENST00000416585 VCANP13611 3396 aa13.04□□□□□ -0.32
SNX30-202ENST00000416585 PIK3CDO00329 1044 aa13.04□□□□□ -0.32
SNX30-202ENST00000416585 LPXNO60711 386 aa13.04□□□□□ -0.32
SNX30-202ENST00000416585 TCF7P36402 384 aaPredicted RBP13.04□□□□□ -0.32
SNX30-202ENST00000416585 ANTXR2P58335 489 aa13.04□□□□□ -0.32
SNX30-202ENST00000416585 IRX6P78412 446 aaPredicted RBP13.04□□□□□ -0.32
SNX30-202ENST00000416585 HIC1Q14526 733 aa13.04□□□□□ -0.32
SNX30-202ENST00000416585 SLC35G1Q2M3R5 365 aa13.04□□□□□ -0.32
SNX30-202ENST00000416585 TRAF7Q6Q0C0 670 aa13.04□□□□□ -0.32
SNX30-202ENST00000416585 TRIM50Q86XT4 487 aa13.04□□□□□ -0.32
SNX30-202ENST00000416585 TNPO1Q92973 898 aaKnown RBP13.04□□□□□ -0.32
SNX30-202ENST00000416585 GPRASP2Q96D09 838 aa13.04□□□□□ -0.32
SNX30-202ENST00000416585 C17orf80Q9BSJ5 609 aa13.04□□□□□ -0.32
SNX30-202ENST00000416585 IFIH1Q9BYX4 1025 aaKnown RBP13.04□□□□□ -0.32
SNX30-202ENST00000416585 PSTPIP2Q9H939 334 aa13.04□□□□□ -0.32
SNX30-202ENST00000416585 SLC12A7Q9Y666 1083 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms