RNA–Protein interactions for RNA: ENST00000416343.2

LINC01349-201, Transcript of long intergenic non-protein coding RNA 1349, humanhuman

TSL 3 BASIC

Gene LINC01349, Length 497 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01349-201ENST00000416343 CDKL5O76039 1030 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 POLR3DP05423 398 aaPredicted RBP4.23□□□□□ -1.73
LINC01349-201ENST00000416343 SLC3A2P08195 630 aaKnown RBP4.23□□□□□ -1.73
LINC01349-201ENST00000416343 IMPDH2P12268 514 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 FERP16591 822 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 ITPKAP23677 461 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 USP14P54578 494 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 VSNL1P62760 191 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 MYL5Q02045 173 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 FKBP4Q02790 459 aaKnown RBP eCLIP4.23□□□□□ -1.73
LINC01349-201ENST00000416343 RIPK1Q13546 671 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 KRT32Q14532 448 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 NAA25Q14CX7 972 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 NCAPHQ15003 741 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 POU4F3Q15319 338 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 ME3Q16798 604 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 HP1BP3Q5SSJ5 553 aaPredicted RBP4.23□□□□□ -1.73
LINC01349-201ENST00000416343 KIAA0319Q5VV43 1072 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 CDCA2Q69YH5 1023 aaPredicted RBP4.23□□□□□ -1.73
LINC01349-201ENST00000416343 SPECC1LQ69YQ0 1117 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 CAPRIN2Q6IMN6 1127 aaKnown RBP4.23□□□□□ -1.73
LINC01349-201ENST00000416343 IQCEQ6IPM2 695 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 CCDC70Q6NSX1 233 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 TTLL7Q6ZT98 887 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 UBE3BQ7Z3V4 1068 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 FERMT3Q86UX7 667 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 TMEM139Q8IV31 216 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 RBM12BQ8IXT5 1001 aaKnown RBP4.23□□□□□ -1.73
LINC01349-201ENST00000416343 ELOA2Q8IYF1 753 aaPredicted RBP4.23□□□□□ -1.73
LINC01349-201ENST00000416343 TSPYL6Q8N831 410 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 FSIP1Q8NA03 581 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 C8orf58Q8NAV2 365 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 OR8K1Q8NGG5 319 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 ZFAND2BQ8WV99 257 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 MRPS27Q92552 414 aaKnown RBP4.23□□□□□ -1.73
LINC01349-201ENST00000416343 SYTL4Q96C24 671 aaPredicted RBP4.23□□□□□ -1.73
LINC01349-201ENST00000416343 CCDC51Q96ER9 411 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 DTNBP1Q96EV8 351 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 PNKPQ96T60 521 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 ZFYVE1Q9HBF4 777 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 CD248Q9HCU0 757 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 SLC40A1Q9NP59 571 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 IRAK4Q9NWZ3 460 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 DDX20Q9UHI6 824 aaKnown RBP4.23□□□□□ -1.73
LINC01349-201ENST00000416343 SERPINA10Q9UK55 444 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 TPCN1Q9ULQ1 816 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 TTF2Q9UNY4 1162 aaKnown RBP4.23□□□□□ -1.73
LINC01349-201ENST00000416343 USP32Q8NFA0 1604 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 MADDQ8WXG6 1647 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 MAGI1Q96QZ7 1491 aaPredicted RBP4.23□□□□□ -1.73
LINC01349-201ENST00000416343 UNC13BO14795 1591 aa4.23□□□□□ -1.73
LINC01349-201ENST00000416343 SHPRHQ149N8 1683 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 UNC13AQ9UPW8 1703 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 GOLGA6BA6NDN3 693 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 H3BQV1 296 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 MYO1FO00160 1098 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 ABLIM1O14639 778 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 MGRN1O60291 552 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 LUC7L3O95232 432 aaKnown RBP4.22□□□□□ -1.73
LINC01349-201ENST00000416343 LARGE1O95461 756 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 SERPINC1P01008 464 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 RAB6AP20340 208 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 ME1P48163 572 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 GCLCP48506 637 aaPredicted RBP4.22□□□□□ -1.73
LINC01349-201ENST00000416343 RAB27AP51159 221 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 NAP1L1P55209 391 aaKnown RBP4.22□□□□□ -1.73
LINC01349-201ENST00000416343 GNGT1P63211 74 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 ROR2Q01974 943 aaKnown RBP4.22□□□□□ -1.73
LINC01349-201ENST00000416343 CKAP4Q07065 602 aaKnown RBP4.22□□□□□ -1.73
LINC01349-201ENST00000416343 ST3GAL1Q11201 340 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 G3BP1Q13283 466 aaKnown RBP eCLIP4.22□□□□□ -1.73
LINC01349-201ENST00000416343 XRCC4Q13426 336 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 NECTIN1Q15223 517 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 ECM1Q16610 540 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 KIAA0753Q2KHM9 967 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 CCDC57Q2TAC2 916 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 ZNF792Q3KQV3 632 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 TBC1D25Q3MII6 688 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 LACTB2Q53H82 288 aaPredicted RBP4.22□□□□□ -1.73
LINC01349-201ENST00000416343 HSP90AB4PQ58FF6 505 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 ADALQ6DHV7 355 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 PPP4R3AQ6IN85 833 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 CYB5D1Q6P9G0 228 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 SLC30A9Q6PML9 568 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 OLFM4Q6UX06 510 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 CCNI2Q6ZMN8 369 aaPredicted RBP4.22□□□□□ -1.73
LINC01349-201ENST00000416343 ZNF574Q6ZN55 896 aaPredicted RBP4.22□□□□□ -1.73
LINC01349-201ENST00000416343 CCDC121Q6ZUS5 278 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 RASGRP2Q7LDG7 609 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 DYMQ7RTS9 669 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 ARMC9Q7Z3E5 817 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 CEP57Q86XR8 500 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 CCDC13Q8IYE1 715 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 TEX9Q8N6V9 391 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 GLIS3Q8NEA6 775 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 TRIM58Q8NG06 486 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 SMARCC2Q8TAQ2 1214 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 MIPOL1Q8TD10 442 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 KCNG4Q8TDN1 519 aa4.22□□□□□ -1.73
LINC01349-201ENST00000416343 LMBR1Q8WVP7 490 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms