RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 SPATA31C2B4DYI2 1134 aa9.45□□□□□ -0.9
RBM39-208ENST00000416108 SLC26A4O43511 780 aa9.45□□□□□ -0.9
RBM39-208ENST00000416108 CHMP2AO43633 222 aa9.45□□□□□ -0.9
RBM39-208ENST00000416108 TRAK2O60296 914 aa9.45□□□□□ -0.9
RBM39-208ENST00000416108 HOXC6P09630 235 aa9.45□□□□□ -0.9
RBM39-208ENST00000416108 TGFB3P10600 412 aa9.45□□□□□ -0.9
RBM39-208ENST00000416108 KRT76Q01546 638 aa9.45□□□□□ -0.9
RBM39-208ENST00000416108 NEDD9Q14511 834 aa9.45□□□□□ -0.9
RBM39-208ENST00000416108 TTLL4Q14679 1199 aa9.45□□□□□ -0.9
RBM39-208ENST00000416108 KLHL40Q2TBA0 621 aa9.45□□□□□ -0.9
RBM39-208ENST00000416108 MFSD14CQ5VZR4 134 aa9.45□□□□□ -0.9
RBM39-208ENST00000416108 MAMDC4Q6UXC1 1216 aa9.45□□□□□ -0.9
RBM39-208ENST00000416108 MIER3Q7Z3K6 550 aa9.45□□□□□ -0.9
RBM39-208ENST00000416108 CEP57L1Q8IYX8 460 aa9.45□□□□□ -0.9
RBM39-208ENST00000416108 NEK9Q8TD19 979 aa9.45□□□□□ -0.9
RBM39-208ENST00000416108 MORC4Q8TE76 937 aa9.45□□□□□ -0.9
RBM39-208ENST00000416108 SCFD2Q8WU76 684 aa9.45□□□□□ -0.9
RBM39-208ENST00000416108 SYMPKQ92797 1274 aaKnown RBP9.45□□□□□ -0.9
RBM39-208ENST00000416108 GJA10Q969M2 543 aa9.45□□□□□ -0.9
RBM39-208ENST00000416108 CCSER1Q9C0I3 900 aa9.45□□□□□ -0.9
RBM39-208ENST00000416108 ABHD16BQ9H3Z7 469 aa9.45□□□□□ -0.9
RBM39-208ENST00000416108 DDX19AQ9NUU7 478 aaKnown RBP9.45□□□□□ -0.9
RBM39-208ENST00000416108 USP25Q9UHP3 1055 aa9.45□□□□□ -0.9
RBM39-208ENST00000416108 HOOK1Q9UJC3 728 aaKnown RBP9.45□□□□□ -0.9
RBM39-208ENST00000416108 KCNH3Q9ULD8 1083 aa9.45□□□□□ -0.9
RBM39-208ENST00000416108 SAMM50Q9Y512 469 aa9.45□□□□□ -0.9
RBM39-208ENST00000416108 NFASCO94856 1347 aa9.45□□□□□ -0.9
RBM39-208ENST00000416108 DKC1O60832 514 aaKnown RBP eCLIP9.44□□□□□ -0.9
RBM39-208ENST00000416108 PSMD10O75832 226 aa9.44□□□□□ -0.9
RBM39-208ENST00000416108 TXNP10599 105 aaKnown RBP9.44□□□□□ -0.9
RBM39-208ENST00000416108 XRCC5P13010 732 aaKnown RBP9.44□□□□□ -0.9
RBM39-208ENST00000416108 LIG1P18858 919 aa9.44□□□□□ -0.9
RBM39-208ENST00000416108 SFNP31947 248 aa9.44□□□□□ -0.9
RBM39-208ENST00000416108 CCT6AP40227 531 aaKnown RBP9.44□□□□□ -0.9
RBM39-208ENST00000416108 STAT6P42226 847 aa9.44□□□□□ -0.9
RBM39-208ENST00000416108 FLT3LGP49771 235 aa9.44□□□□□ -0.9
RBM39-208ENST00000416108 NDUFA8P51970 172 aa9.44□□□□□ -0.9
RBM39-208ENST00000416108 JAK3P52333 1124 aa9.44□□□□□ -0.9
RBM39-208ENST00000416108 PRMT2P55345 433 aa9.44□□□□□ -0.9
RBM39-208ENST00000416108 PPP2R5CQ13362 524 aa9.44□□□□□ -0.9
RBM39-208ENST00000416108 IL17AQ16552 155 aa9.44□□□□□ -0.9
RBM39-208ENST00000416108 OLFML2BQ68BL8 750 aa9.44□□□□□ -0.9
RBM39-208ENST00000416108 PDILTQ8N807 584 aa9.44□□□□□ -0.9
RBM39-208ENST00000416108 IGSF22Q8N9C0 903 aa9.44□□□□□ -0.9
RBM39-208ENST00000416108 RDM1Q8NG50 284 aa9.44□□□□□ -0.9
RBM39-208ENST00000416108 RAET1EQ8TD07 263 aa9.44□□□□□ -0.9
RBM39-208ENST00000416108 GPT2Q8TD30 523 aa9.44□□□□□ -0.9
RBM39-208ENST00000416108 USP6NLQ92738 828 aa9.44□□□□□ -0.9
RBM39-208ENST00000416108 DHX58Q96C10 678 aa9.44□□□□□ -0.9
RBM39-208ENST00000416108 TRIM47Q96LD4 638 aa9.44□□□□□ -0.9
RBM39-208ENST00000416108 SENP7Q9BQF6 1050 aa9.44□□□□□ -0.9
RBM39-208ENST00000416108 ANP32EQ9BTT0 268 aa9.44□□□□□ -0.9
RBM39-208ENST00000416108 ARHGAP39Q9C0H5 1083 aa9.44□□□□□ -0.9
RBM39-208ENST00000416108 NT5C3AQ9H0P0 336 aa9.44□□□□□ -0.9
RBM39-208ENST00000416108 MLXIPQ9HAP2 919 aa9.44□□□□□ -0.9
RBM39-208ENST00000416108 JPH1Q9HDC5 661 aaPredicted RBP9.44□□□□□ -0.9
RBM39-208ENST00000416108 SLC9A2Q9UBY0 812 aa9.44□□□□□ -0.9
RBM39-208ENST00000416108 GJD2Q9UKL4 321 aa9.44□□□□□ -0.9
RBM39-208ENST00000416108 FRMPD3Q5JV73 1810 aa9.44□□□□□ -0.9
RBM39-208ENST00000416108 PP2D1A8MPX8 630 aa9.43□□□□□ -0.9
RBM39-208ENST00000416108 WDR64B1ANS9 1081 aa9.43□□□□□ -0.9
RBM39-208ENST00000416108 NOP56O00567 594 aaKnown RBP9.43□□□□□ -0.9
RBM39-208ENST00000416108 POLR2DO15514 142 aaKnown RBP9.43□□□□□ -0.9
RBM39-208ENST00000416108 ZNF202O95125 648 aa9.43□□□□□ -0.9
RBM39-208ENST00000416108 GGPS1O95749 300 aa9.43□□□□□ -0.9
RBM39-208ENST00000416108 KCNA2P16389 499 aa9.43□□□□□ -0.9
RBM39-208ENST00000416108 CTGFP29279 349 aa9.43□□□□□ -0.9
RBM39-208ENST00000416108 SP4Q02446 784 aa9.43□□□□□ -0.9
RBM39-208ENST00000416108 PRKCZQ05513 592 aa9.43□□□□□ -0.9
RBM39-208ENST00000416108 SEMA3FQ13275 785 aa9.43□□□□□ -0.9
RBM39-208ENST00000416108 ITGB3BPQ13352 177 aaPredicted RBP9.43□□□□□ -0.9
RBM39-208ENST00000416108 IRF5Q13568 498 aa9.43□□□□□ -0.9
RBM39-208ENST00000416108 ACVR2BQ13705 512 aa9.43□□□□□ -0.9
RBM39-208ENST00000416108 KARSQ15046 597 aaKnown RBP9.43□□□□□ -0.9
RBM39-208ENST00000416108 EPHA7Q15375 998 aa9.43□□□□□ -0.9
RBM39-208ENST00000416108 CCDC183Q5T5S1 534 aa9.43□□□□□ -0.9
RBM39-208ENST00000416108 RRAGBQ5VZM2 374 aa9.43□□□□□ -0.9
RBM39-208ENST00000416108 ZNF746Q6NUN9 644 aaPredicted RBP9.43□□□□□ -0.9
RBM39-208ENST00000416108 KANK3Q6NY19 840 aa9.43□□□□□ -0.9
RBM39-208ENST00000416108 CAVIN1Q6NZI2 390 aaKnown RBP9.43□□□□□ -0.9
RBM39-208ENST00000416108 MIS18BP1Q6P0N0 1132 aa9.43□□□□□ -0.9
RBM39-208ENST00000416108 OTOP1Q7RTM1 612 aa9.43□□□□□ -0.9
RBM39-208ENST00000416108 DHX37Q8IY37 1157 aaKnown RBP9.43□□□□□ -0.9
RBM39-208ENST00000416108 SMAP1Q8IYB5 467 aaPredicted RBP9.43□□□□□ -0.9
RBM39-208ENST00000416108 IQUBQ8NA54 791 aa9.43□□□□□ -0.9
RBM39-208ENST00000416108 CNNM3Q8NE01 707 aa9.43□□□□□ -0.9
RBM39-208ENST00000416108 ZNF296Q8WUU4 475 aaPredicted RBP9.43□□□□□ -0.9
RBM39-208ENST00000416108 EPSTI1Q96J88 318 aa9.43□□□□□ -0.9
RBM39-208ENST00000416108 NUP62CLQ9H1M0 184 aa9.43□□□□□ -0.9
RBM39-208ENST00000416108 TNMDQ9H2S6 317 aa9.43□□□□□ -0.9
RBM39-208ENST00000416108 UNC45AQ9H3U1 944 aa9.43□□□□□ -0.9
RBM39-208ENST00000416108 GOLPH3LQ9H4A5 285 aa9.43□□□□□ -0.9
RBM39-208ENST00000416108 DACT1Q9NYF0 836 aa9.43□□□□□ -0.9
RBM39-208ENST00000416108 SRRDQ9UH36 339 aa9.43□□□□□ -0.9
RBM39-208ENST00000416108 TSKSQ9UJT2 592 aa9.43□□□□□ -0.9
RBM39-208ENST00000416108 VAV3Q9UKW4 847 aa9.43□□□□□ -0.9
RBM39-208ENST00000416108 GABRQQ9UN88 632 aa9.43□□□□□ -0.9
RBM39-208ENST00000416108 HPSEQ9Y251 543 aa9.43□□□□□ -0.9
RBM39-208ENST00000416108 FAM237AA0A1B0GTK4 181 aa9.42□□□□□ -0.9
RBM39-208ENST00000416108 NKRFO15226 690 aaKnown RBP eCLIP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms