RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 MYOCDQ8IZQ8 938 aa4.49□□□□□ -1.69
LINC01048-201ENST00000414480 ANKRD42Q8N9B4 389 aa4.49□□□□□ -1.69
LINC01048-201ENST00000414480 PPHLN1Q8NEY8 458 aaKnown RBP4.49□□□□□ -1.69
LINC01048-201ENST00000414480 GSDMBQ8TAX9 411 aa4.49□□□□□ -1.69
LINC01048-201ENST00000414480 TMC1Q8TDI8 760 aa4.49□□□□□ -1.69
LINC01048-201ENST00000414480 E2F7Q96AV8 911 aa4.49□□□□□ -1.69
LINC01048-201ENST00000414480 FAM46AQ96IP4 442 aaKnown RBP4.49□□□□□ -1.69
LINC01048-201ENST00000414480 ZNF496Q96IT1 587 aaPredicted RBP4.49□□□□□ -1.69
LINC01048-201ENST00000414480 RNPC3Q96LT9 517 aaKnown RBP4.49□□□□□ -1.69
LINC01048-201ENST00000414480 MYRFLQ96LU7 910 aa4.49□□□□□ -1.69
LINC01048-201ENST00000414480 SCLT1Q96NL6 688 aa4.49□□□□□ -1.69
LINC01048-201ENST00000414480 NEK1Q96PY6 1258 aa4.49□□□□□ -1.69
LINC01048-201ENST00000414480 GSDMAQ96QA5 445 aa4.49□□□□□ -1.69
LINC01048-201ENST00000414480 SLC39A3Q9BRY0 314 aa4.49□□□□□ -1.69
LINC01048-201ENST00000414480 SELENOOQ9BVL4 669 aa4.49□□□□□ -1.69
LINC01048-201ENST00000414480 PPP1R12CQ9BZL4 782 aa4.49□□□□□ -1.69
LINC01048-201ENST00000414480 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.49□□□□□ -1.69
LINC01048-201ENST00000414480 CHST12Q9NRB3 414 aa4.49□□□□□ -1.69
LINC01048-201ENST00000414480 SAGE1Q9NXZ1 904 aa4.49□□□□□ -1.69
LINC01048-201ENST00000414480 TMOD3Q9NYL9 352 aa4.49□□□□□ -1.69
LINC01048-201ENST00000414480 UBAP1Q9NZ09 502 aa4.49□□□□□ -1.69
LINC01048-201ENST00000414480 TRIM33Q9UPN9 1127 aa4.49□□□□□ -1.69
LINC01048-201ENST00000414480 N6AMT1Q9Y5N5 214 aa4.49□□□□□ -1.69
LINC01048-201ENST00000414480 AFDNP55196 1824 aaKnown RBP4.49□□□□□ -1.69
LINC01048-201ENST00000414480 ARID1BQ8NFD5 2236 aaPredicted RBP4.48□□□□□ -1.69
LINC01048-201ENST00000414480 HMX2A2RU54 273 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 H0YIN7 160 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 FZD9O00144 591 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 ELL2O00472 640 aaPredicted RBP4.48□□□□□ -1.69
LINC01048-201ENST00000414480 E2F6O75461 281 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 KRT38O76015 456 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 MMEP08473 750 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 MAPK1P28482 360 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 ATP6V1E1P36543 226 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 CRKLP46109 303 aaKnown RBP4.48□□□□□ -1.69
LINC01048-201ENST00000414480 SERPINB4P48594 390 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 TNNI2P48788 182 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 TPD52P55327 224 aaPredicted RBP4.48□□□□□ -1.69
LINC01048-201ENST00000414480 IRX1P78414 480 aaPredicted RBP4.48□□□□□ -1.69
LINC01048-201ENST00000414480 AMPD3Q01432 767 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 RAD51AP2Q09MP3 1159 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 KRT72Q14CN4 511 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 SF3B3Q15393 1217 aaKnown RBP4.48□□□□□ -1.69
LINC01048-201ENST00000414480 SYCP1Q15431 976 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 USPL1Q5W0Q7 1092 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 PDXDC1Q6P996 788 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 MAATS1Q7Z4T9 603 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 MYLK4Q86YV6 388 aaPredicted RBP4.48□□□□□ -1.69
LINC01048-201ENST00000414480 CCDC191Q8NCU4 936 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 GALNT11Q8NCW6 608 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 RASSF8Q8NHQ8 419 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 WDR66Q8TBY9 1149 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 SKA1Q96BD8 255 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 CENPOQ9BU64 300 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 AP1M1Q9BXS5 423 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 MAK16Q9BXY0 300 aaKnown RBP4.48□□□□□ -1.69
LINC01048-201ENST00000414480 KRTAP4-9Q9BYQ8 210 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 DNAJC25Q9H1X3 360 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 ACBD3Q9H3P7 528 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 PTPRHQ9HD43 1115 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 RIC8AQ9NPQ8 531 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 RRAGDQ9NQL2 400 aaPredicted RBP4.48□□□□□ -1.69
LINC01048-201ENST00000414480 GINM1Q9NU53 330 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 RNF186Q9NXI6 227 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 ETAA1Q9NY74 926 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 HOXC10Q9NYD6 342 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 CLIP2Q9UDT6 1046 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 PCSK1NQ9UHG2 260 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 XPO7Q9UIA9 1087 aaKnown RBP4.48□□□□□ -1.69
LINC01048-201ENST00000414480 FBXL5Q9UKA1 691 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 GTF2A1LQ9UNN4 478 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.48□□□□□ -1.69
LINC01048-201ENST00000414480 DAAM1Q9Y4D1 1078 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 TRIM17Q9Y577 477 aa4.48□□□□□ -1.69
LINC01048-201ENST00000414480 MAGED1Q9Y5V3 778 aaPredicted RBP4.48□□□□□ -1.69
LINC01048-201ENST00000414480 V9GYY5 206 aaPredicted RBP4.48□□□□□ -1.69
LINC01048-201ENST00000414480 EDC4Q6P2E9 1401 aaKnown RBP4.47□□□□□ -1.69
LINC01048-201ENST00000414480 RANBP2P49792 3224 aaKnown RBP4.47□□□□□ -1.69
LINC01048-201ENST00000414480 TRIM64A6NGJ6 449 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 TRIM64BA6NI03 449 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 BOLA2-SMG1P6H3BVE0 249 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 LINC01387J3KSC0 135 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 FOXN3O00409 490 aaPredicted RBP4.47□□□□□ -1.69
LINC01048-201ENST00000414480 OPLAHO14841 1288 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 MYO1BO43795 1136 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 KINO60870 393 aaKnown RBP4.47□□□□□ -1.69
LINC01048-201ENST00000414480 SERPINB2P05120 415 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 VIL1P09327 827 aaKnown RBP4.47□□□□□ -1.69
LINC01048-201ENST00000414480 IFIT2P09913 472 aaKnown RBP4.47□□□□□ -1.69
LINC01048-201ENST00000414480 FERP16591 822 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 ZSCAN20P17040 1043 aaPredicted RBP4.47□□□□□ -1.69
LINC01048-201ENST00000414480 CNGA1P29973 690 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 HPDP32754 393 aaPredicted RBP4.47□□□□□ -1.69
LINC01048-201ENST00000414480 CA8P35219 290 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 EPS15P42566 896 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 AMPHP49418 695 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 NUCB2P80303 420 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 ARID5AQ03989 594 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 COX10Q12887 443 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 NOGQ13253 232 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 326.3 ms