RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 GLRX3O76003 335 aaKnown RBP5.51□□□□□ -1.53
HMGB1P11-201ENST00000413899 ASGR2P07307 311 aa5.51□□□□□ -1.53
HMGB1P11-201ENST00000413899 VIL1P09327 827 aaKnown RBP5.51□□□□□ -1.53
HMGB1P11-201ENST00000413899 MED14OSP0DP75 135 aa5.51□□□□□ -1.53
HMGB1P11-201ENST00000413899 GLDCP23378 1020 aa5.51□□□□□ -1.53
HMGB1P11-201ENST00000413899 PMLP29590 882 aa5.51□□□□□ -1.53
HMGB1P11-201ENST00000413899 MASP1P48740 699 aa5.51□□□□□ -1.53
HMGB1P11-201ENST00000413899 DNM2P50570 870 aa5.51□□□□□ -1.53
HMGB1P11-201ENST00000413899 CDR1P51861 262 aa5.51□□□□□ -1.53
HMGB1P11-201ENST00000413899 ZNF200P98182 395 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P11-201ENST00000413899 TARBP2Q15633 366 aaKnown RBP5.51□□□□□ -1.53
HMGB1P11-201ENST00000413899 FIGNQ5HY92 759 aa5.51□□□□□ -1.53
HMGB1P11-201ENST00000413899 OGFOD2Q6N063 350 aa5.51□□□□□ -1.53
HMGB1P11-201ENST00000413899 ARHGAP36Q6ZRI8 547 aa5.51□□□□□ -1.53
HMGB1P11-201ENST00000413899 OTOP1Q7RTM1 612 aa5.51□□□□□ -1.53
HMGB1P11-201ENST00000413899 OSTM1Q86WC4 334 aa5.51□□□□□ -1.53
HMGB1P11-201ENST00000413899 KIF18BQ86Y91 864 aa5.51□□□□□ -1.53
HMGB1P11-201ENST00000413899 PPM1KQ8N3J5 372 aa5.51□□□□□ -1.53
HMGB1P11-201ENST00000413899 MZB1Q8WU39 189 aa5.51□□□□□ -1.53
HMGB1P11-201ENST00000413899 ALG3Q92685 438 aa5.51□□□□□ -1.53
HMGB1P11-201ENST00000413899 TARS2Q9BW92 718 aaKnown RBP5.51□□□□□ -1.53
HMGB1P11-201ENST00000413899 MAPRE3Q9UPY8 281 aa5.51□□□□□ -1.53
HMGB1P11-201ENST00000413899 MAN2B1O00754 1011 aa5.5□□□□□ -1.53
HMGB1P11-201ENST00000413899 SLC27A2O14975 620 aa5.5□□□□□ -1.53
HMGB1P11-201ENST00000413899 JMJD7P0C870 316 aa5.5□□□□□ -1.53
HMGB1P11-201ENST00000413899 NCAM1P13591 858 aa5.5□□□□□ -1.53
HMGB1P11-201ENST00000413899 IGFBP6P24592 240 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P11-201ENST00000413899 JAM2P57087 298 aa5.5□□□□□ -1.53
HMGB1P11-201ENST00000413899 DLG4P78352 724 aa5.5□□□□□ -1.53
HMGB1P11-201ENST00000413899 ARHGAP44Q17R89 818 aa5.5□□□□□ -1.53
HMGB1P11-201ENST00000413899 CFAP100Q494V2 611 aa5.5□□□□□ -1.53
HMGB1P11-201ENST00000413899 ETV3LQ6ZN32 361 aa5.5□□□□□ -1.53
HMGB1P11-201ENST00000413899 KCTD1Q719H9 257 aa5.5□□□□□ -1.53
HMGB1P11-201ENST00000413899 THNSL2Q86YJ6 484 aa5.5□□□□□ -1.53
HMGB1P11-201ENST00000413899 IGDCC3Q8IVU1 814 aa5.5□□□□□ -1.53
HMGB1P11-201ENST00000413899 AHI1Q8N157 1196 aa5.5□□□□□ -1.53
HMGB1P11-201ENST00000413899 CHST14Q8NCH0 376 aa5.5□□□□□ -1.53
HMGB1P11-201ENST00000413899 ARRDC4Q8NCT1 418 aa5.5□□□□□ -1.53
HMGB1P11-201ENST00000413899 PPP1R16BQ96T49 567 aa5.5□□□□□ -1.53
HMGB1P11-201ENST00000413899 MTFR1LQ9H019 292 aa5.5□□□□□ -1.53
HMGB1P11-201ENST00000413899 NGRNQ9NPE2 291 aaKnown RBP5.5□□□□□ -1.53
HMGB1P11-201ENST00000413899 PLA2G2DQ9UNK4 145 aa5.5□□□□□ -1.53
HMGB1P11-201ENST00000413899 SBNO2Q9Y2G9 1366 aa5.5□□□□□ -1.53
HMGB1P11-201ENST00000413899 M0R2C6 588 aa5.49□□□□□ -1.53
HMGB1P11-201ENST00000413899 TRAF5O00463 557 aa5.49□□□□□ -1.53
HMGB1P11-201ENST00000413899 PDE8AO60658 829 aa5.49□□□□□ -1.53
HMGB1P11-201ENST00000413899 CLASP2O75122 1294 aaKnown RBP5.49□□□□□ -1.53
HMGB1P11-201ENST00000413899 KRT1P04264 644 aa5.49□□□□□ -1.53
HMGB1P11-201ENST00000413899 MYCLP1P12525 358 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P11-201ENST00000413899 GJA4P35212 333 aa5.49□□□□□ -1.53
HMGB1P11-201ENST00000413899 CACNB2Q08289 660 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P11-201ENST00000413899 TUSC3Q13454 348 aa5.49□□□□□ -1.53
HMGB1P11-201ENST00000413899 PIK3R6Q5UE93 754 aa5.49□□□□□ -1.53
HMGB1P11-201ENST00000413899 SYDE1Q6ZW31 735 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P11-201ENST00000413899 KRT26Q7Z3Y9 468 aa5.49□□□□□ -1.53
HMGB1P11-201ENST00000413899 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P11-201ENST00000413899 B3GNT8Q7Z7M8 397 aa5.49□□□□□ -1.53
HMGB1P11-201ENST00000413899 PTRH1Q86Y79 214 aaKnown RBP5.49□□□□□ -1.53
HMGB1P11-201ENST00000413899 CISD2Q8N5K1 135 aaKnown RBP5.49□□□□□ -1.53
HMGB1P11-201ENST00000413899 CLEC4DQ8WXI8 215 aa5.49□□□□□ -1.53
HMGB1P11-201ENST00000413899 KCNN1Q92952 543 aa5.49□□□□□ -1.53
HMGB1P11-201ENST00000413899 WNK4Q96J92 1243 aa5.49□□□□□ -1.53
HMGB1P11-201ENST00000413899 BCAS3Q9H6U6 928 aa5.49□□□□□ -1.53
HMGB1P11-201ENST00000413899 DTLQ9NZJ0 730 aa5.49□□□□□ -1.53
HMGB1P11-201ENST00000413899 B4GALT6Q9UBX8 382 aa5.49□□□□□ -1.53
HMGB1P11-201ENST00000413899 TELO2Q9Y4R8 837 aa5.49□□□□□ -1.53
HMGB1P11-201ENST00000413899 ATP23Q9Y6H3 246 aa5.49□□□□□ -1.53
HMGB1P11-201ENST00000413899 SHROOM4Q9ULL8 1493 aa5.48□□□□□ -1.53
HMGB1P11-201ENST00000413899 ETV2O00321 342 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P11-201ENST00000413899 ATF2P15336 505 aa5.48□□□□□ -1.53
HMGB1P11-201ENST00000413899 YBX3P16989 372 aaKnown RBP eCLIP5.48□□□□□ -1.53
HMGB1P11-201ENST00000413899 PFKLP17858 780 aa5.48□□□□□ -1.53
HMGB1P11-201ENST00000413899 KRT15P19012 456 aa5.48□□□□□ -1.53
HMGB1P11-201ENST00000413899 STAT3P40763 770 aa5.48□□□□□ -1.53
HMGB1P11-201ENST00000413899 EPHB3P54753 998 aa5.48□□□□□ -1.53
HMGB1P11-201ENST00000413899 TMEM132EQ6IEE7 984 aa5.48□□□□□ -1.53
HMGB1P11-201ENST00000413899 CNNM4Q6P4Q7 775 aa5.48□□□□□ -1.53
HMGB1P11-201ENST00000413899 ZNF662Q6ZS27 426 aa5.48□□□□□ -1.53
HMGB1P11-201ENST00000413899 RNF180Q86T96 592 aa5.48□□□□□ -1.53
HMGB1P11-201ENST00000413899 NOSTRINQ8IVI9 506 aa5.48□□□□□ -1.53
HMGB1P11-201ENST00000413899 FAM177A1Q8N128 213 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P11-201ENST00000413899 C2orf69Q8N8R5 385 aa5.48□□□□□ -1.53
HMGB1P11-201ENST00000413899 TOE1Q96GM8 510 aaKnown RBP5.48□□□□□ -1.53
HMGB1P11-201ENST00000413899 SGPP1Q9BX95 441 aa5.48□□□□□ -1.53
HMGB1P11-201ENST00000413899 CD244Q9BZW8 370 aa5.48□□□□□ -1.53
HMGB1P11-201ENST00000413899 PCDH18Q9HCL0 1135 aa5.48□□□□□ -1.53
HMGB1P11-201ENST00000413899 CABP5Q9NP86 173 aa5.48□□□□□ -1.53
HMGB1P11-201ENST00000413899 SLC12A8A0AV02 714 aa5.47□□□□□ -1.53
HMGB1P11-201ENST00000413899 KPNA6O60684 536 aa5.47□□□□□ -1.53
HMGB1P11-201ENST00000413899 TSPAN15O95858 294 aa5.47□□□□□ -1.53
HMGB1P11-201ENST00000413899 F2P00734 622 aa5.47□□□□□ -1.53
HMGB1P11-201ENST00000413899 LRG1P02750 347 aa5.47□□□□□ -1.53
HMGB1P11-201ENST00000413899 C8BP07358 591 aa5.47□□□□□ -1.53
HMGB1P11-201ENST00000413899 TMEM253P0C7T8 217 aa5.47□□□□□ -1.53
HMGB1P11-201ENST00000413899 ZBTB48P10074 688 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P11-201ENST00000413899 FAHP16930 419 aa5.47□□□□□ -1.53
HMGB1P11-201ENST00000413899 NEK4P51957 841 aa5.47□□□□□ -1.53
HMGB1P11-201ENST00000413899 PCBP1Q15365 356 aaKnown RBP eCLIP5.47□□□□□ -1.53
HMGB1P11-201ENST00000413899 CR1LQ2VPA4 569 aa5.47□□□□□ -1.53
HMGB1P11-201ENST00000413899 TEPPQ6URK8 271 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms