RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 JADE2Q9NQC1 790 aa21.54■■□□□ 1.04
TRIM56-202ENST00000412507 PKD2L1Q9P0L9 805 aa21.54■■□□□ 1.04
TRIM56-202ENST00000412507 TELO2Q9Y4R8 837 aa21.54■■□□□ 1.04
TRIM56-202ENST00000412507 LAMA3Q16787 3333 aa21.54■■□□□ 1.04
TRIM56-202ENST00000412507 HAS3O00219 553 aa21.53■■□□□ 1.04
TRIM56-202ENST00000412507 CSF2RAP15509 400 aa21.53■■□□□ 1.04
TRIM56-202ENST00000412507 KCNA2P16389 499 aa21.53■■□□□ 1.04
TRIM56-202ENST00000412507 SP4Q02446 784 aa21.53■■□□□ 1.04
TRIM56-202ENST00000412507 SCRN1Q12765 414 aa21.53■■□□□ 1.04
TRIM56-202ENST00000412507 MTMR1Q13613 665 aa21.53■■□□□ 1.04
TRIM56-202ENST00000412507 ANKRD1Q15327 319 aa21.53■■□□□ 1.04
TRIM56-202ENST00000412507 KIAA0753Q2KHM9 967 aa21.53■■□□□ 1.04
TRIM56-202ENST00000412507 CPLX2Q6PUV4 134 aaKnown RBP21.53■■□□□ 1.04
TRIM56-202ENST00000412507 TMEM199Q8N511 208 aa21.53■■□□□ 1.04
TRIM56-202ENST00000412507 CCDC148Q8NFR7 591 aa21.53■■□□□ 1.04
TRIM56-202ENST00000412507 CYP2W1Q8TAV3 490 aa21.53■■□□□ 1.04
TRIM56-202ENST00000412507 GPR20Q99678 358 aa21.53■■□□□ 1.04
TRIM56-202ENST00000412507 MXRA8Q9BRK3 442 aa21.53■■□□□ 1.04
TRIM56-202ENST00000412507 SLKQ9H2G2 1235 aaPredicted RBP21.53■■□□□ 1.04
TRIM56-202ENST00000412507 HDAC6Q9UBN7 1215 aa21.53■■□□□ 1.04
TRIM56-202ENST00000412507 PFKFB2O60825 505 aa21.52■■□□□ 1.04
TRIM56-202ENST00000412507 DEXIO95424 95 aa21.52■■□□□ 1.04
TRIM56-202ENST00000412507 LGALS2P05162 132 aa21.52■■□□□ 1.04
TRIM56-202ENST00000412507 GNA11P29992 359 aa21.52■■□□□ 1.04
TRIM56-202ENST00000412507 SREBF1P36956 1147 aa21.52■■□□□ 1.04
TRIM56-202ENST00000412507 CCL23P55773 120 aa21.52■■□□□ 1.04
TRIM56-202ENST00000412507 PPIGQ13427 754 aaKnown RBP eCLIP21.52■■□□□ 1.042e-6■■□□□ 12.6
TRIM56-202ENST00000412507 GDF6Q6KF10 455 aaPredicted RBP21.52■■□□□ 1.04
TRIM56-202ENST00000412507 REXO1Q8N1G1 1221 aaKnown RBP21.52■■□□□ 1.04
TRIM56-202ENST00000412507 GIMAP8Q8ND71 665 aaPredicted RBP21.52■■□□□ 1.04
TRIM56-202ENST00000412507 C16orf70Q9BSU1 422 aa21.52■■□□□ 1.04
TRIM56-202ENST00000412507 SLC34A2O95436 690 aa21.51■■□□□ 1.03
TRIM56-202ENST00000412507 NEK4P51957 841 aa21.51■■□□□ 1.03
TRIM56-202ENST00000412507 ARHGAP4P98171 946 aa21.51■■□□□ 1.03
TRIM56-202ENST00000412507 PTGISQ16647 500 aa21.51■■□□□ 1.03
TRIM56-202ENST00000412507 SESTD1Q86VW0 696 aa21.51■■□□□ 1.03
TRIM56-202ENST00000412507 C7orf31Q8N865 590 aa21.51■■□□□ 1.03
TRIM56-202ENST00000412507 RASGRP4Q8TDF6 673 aa21.51■■□□□ 1.03
TRIM56-202ENST00000412507 WNT8AQ9H1J5 351 aa21.51■■□□□ 1.03
TRIM56-202ENST00000412507 SH3GLB2Q9NR46 395 aa21.51■■□□□ 1.03
TRIM56-202ENST00000412507 GTF2IRD1Q9UHL9 959 aa21.51■■□□□ 1.03
TRIM56-202ENST00000412507 NOD1Q9Y239 953 aa21.51■■□□□ 1.03
TRIM56-202ENST00000412507 LAMA2P24043 3122 aaKnown RBP21.51■■□□□ 1.03
TRIM56-202ENST00000412507 MAFGO15525 162 aa21.5■■□□□ 1.03
TRIM56-202ENST00000412507 DTNBO60941 627 aa21.5■■□□□ 1.03
TRIM56-202ENST00000412507 ARP10275 920 aa21.5■■□□□ 1.03
TRIM56-202ENST00000412507 ACRP10323 421 aa21.5■■□□□ 1.03
TRIM56-202ENST00000412507 ZNF76P36508 570 aa21.5■■□□□ 1.03
TRIM56-202ENST00000412507 NLRP5P59047 1200 aa21.5■■□□□ 1.03
TRIM56-202ENST00000412507 CEP55Q53EZ4 464 aa21.5■■□□□ 1.03
TRIM56-202ENST00000412507 C16orf59Q7L2K0 433 aa21.5■■□□□ 1.03
TRIM56-202ENST00000412507 BICD2Q8TD16 824 aa21.5■■□□□ 1.03
TRIM56-202ENST00000412507 AIFM3Q96NN9 605 aa21.5■■□□□ 1.03
TRIM56-202ENST00000412507 CTAGE1Q96RT6 745 aa21.5■■□□□ 1.03
TRIM56-202ENST00000412507 KCNH7Q9NS40 1196 aa21.5■■□□□ 1.03
TRIM56-202ENST00000412507 H3BRB1 525 aa21.49■■□□□ 1.03
TRIM56-202ENST00000412507 LARGE1O95461 756 aa21.49■■□□□ 1.03
TRIM56-202ENST00000412507 UTP14CQ5TAP6 766 aaKnown RBP21.49■■□□□ 1.03
TRIM56-202ENST00000412507 MCTP2Q6DN12 878 aa21.49■■□□□ 1.03
TRIM56-202ENST00000412507 CRYGNQ8WXF5 182 aa21.49■■□□□ 1.03
TRIM56-202ENST00000412507 SCLYQ96I15 445 aa21.49■■□□□ 1.03
TRIM56-202ENST00000412507 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.49■■□□□ 1.03
TRIM56-202ENST00000412507 TUT1Q9H6E5 874 aaKnown RBP21.49■■□□□ 1.03
TRIM56-202ENST00000412507 MEIS1O00470 390 aa21.48■■□□□ 1.03
TRIM56-202ENST00000412507 CDKL5O76039 1030 aa21.48■■□□□ 1.03
TRIM56-202ENST00000412507 CYP3A4P08684 503 aa21.48■■□□□ 1.03
TRIM56-202ENST00000412507 ME3Q16798 604 aa21.48■■□□□ 1.03
TRIM56-202ENST00000412507 TMEM240Q5SV17 173 aa21.48■■□□□ 1.03
TRIM56-202ENST00000412507 TRIM50Q86XT4 487 aa21.48■■□□□ 1.03
TRIM56-202ENST00000412507 NECAB1Q8N987 351 aa21.48■■□□□ 1.03
TRIM56-202ENST00000412507 RNPC3Q96LT9 517 aaKnown RBP21.48■■□□□ 1.03
TRIM56-202ENST00000412507 IL23AQ9NPF7 189 aa21.48■■□□□ 1.03
TRIM56-202ENST00000412507 LOXHD1Q8IVV2 1947 aa21.47■■□□□ 1.03
TRIM56-202ENST00000412507 GSTTP1A0A1W2PQM5 241 aa21.47■■□□□ 1.03
TRIM56-202ENST00000412507 FAM86B1E9PN63 330 aa21.47■■□□□ 1.03
TRIM56-202ENST00000412507 FAM86B2P0C5J1 330 aa21.47■■□□□ 1.03
TRIM56-202ENST00000412507 TCF7P36402 384 aaPredicted RBP21.47■■□□□ 1.03
TRIM56-202ENST00000412507 ZNF200P98182 395 aaPredicted RBP21.47■■□□□ 1.03
TRIM56-202ENST00000412507 HIC1Q14526 733 aa21.47■■□□□ 1.03
TRIM56-202ENST00000412507 ZNF365Q70YC5 407 aa21.47■■□□□ 1.03
TRIM56-202ENST00000412507 CTDNEP1O95476 244 aa21.46■■□□□ 1.03
TRIM56-202ENST00000412507 PLA2G4DQ86XP0 818 aa21.46■■□□□ 1.03
TRIM56-202ENST00000412507 SEPT1Q8WYJ6 367 aa21.46■■□□□ 1.03
TRIM56-202ENST00000412507 DHX38Q92620 1227 aaKnown RBP21.46■■□□□ 1.03
TRIM56-202ENST00000412507 AGO4Q9HCK5 861 aaKnown RBP21.46■■□□□ 1.03
TRIM56-202ENST00000412507 JPH1Q9HDC5 661 aaPredicted RBP21.46■■□□□ 1.03
TRIM56-202ENST00000412507 PCDHA4Q9UN74 947 aa21.46■■□□□ 1.03
TRIM56-202ENST00000412507 STK36Q9NRP7 1315 aa21.46■■□□□ 1.03
TRIM56-202ENST00000412507 EVPLQ92817 2033 aa21.46■■□□□ 1.03
TRIM56-202ENST00000412507 IGLV3-22A0A075B6J6 115 aa21.45■■□□□ 1.02
TRIM56-202ENST00000412507 PITPNM1O00562 1244 aa21.45■■□□□ 1.02
TRIM56-202ENST00000412507 ITGB3BPQ13352 177 aaPredicted RBP21.45■■□□□ 1.02
TRIM56-202ENST00000412507 BFSP2Q13515 415 aa21.45■■□□□ 1.02
TRIM56-202ENST00000412507 PSRC1Q6PGN9 363 aaPredicted RBP21.45■■□□□ 1.02
TRIM56-202ENST00000412507 NIPA1Q7RTP0 329 aa21.45■■□□□ 1.02
TRIM56-202ENST00000412507 RETREG2Q8NC44 543 aa21.45■■□□□ 1.02
TRIM56-202ENST00000412507 GTF3C6Q969F1 213 aa21.45■■□□□ 1.02
TRIM56-202ENST00000412507 SDF4Q9BRK5 362 aa21.45■■□□□ 1.02
TRIM56-202ENST00000412507 SLC9A2Q9UBY0 812 aa21.45■■□□□ 1.02
TRIM56-202ENST00000412507 ZNF215Q9UL58 517 aaPredicted RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms