RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 APOA5Q6Q788 366 aa25.66■■□□□ 1.7
MSH6-202ENST00000411819 HERC6Q8IVU3 1022 aa25.66■■□□□ 1.7
MSH6-202ENST00000411819 PHOSPHO2Q8TCD6 241 aa25.66■■□□□ 1.7
MSH6-202ENST00000411819 PRUNE2Q8WUY3 3088 aa25.65■■□□□ 1.7
MSH6-202ENST00000411819 KIF28PB7ZC32 967 aa25.65■■□□□ 1.7
MSH6-202ENST00000411819 NBNO60934 754 aa25.65■■□□□ 1.7
MSH6-202ENST00000411819 HIC1Q14526 733 aa25.65■■□□□ 1.7
MSH6-202ENST00000411819 GPNMBQ14956 572 aa25.65■■□□□ 1.7
MSH6-202ENST00000411819 ZNF618Q5T7W0 954 aa25.65■■□□□ 1.7
MSH6-202ENST00000411819 CNKSR3Q6P9H4 555 aa25.65■■□□□ 1.7
MSH6-202ENST00000411819 USP26Q9BXU7 913 aa25.65■■□□□ 1.7
MSH6-202ENST00000411819 CHD9Q3L8U1 2897 aa25.64■■□□□ 1.7
MSH6-202ENST00000411819 SPDYE3A6NKU9 549 aa25.64■■□□□ 1.7
MSH6-202ENST00000411819 SMIM10L2AP0DMW4 78 aa25.64■■□□□ 1.7
MSH6-202ENST00000411819 SMIM10L2BP0DMW5 78 aa25.64■■□□□ 1.7
MSH6-202ENST00000411819 WDR5P61964 334 aaKnown RBP25.64■■□□□ 1.7
MSH6-202ENST00000411819 TRIM71Q2Q1W2 868 aaKnown RBP25.64■■□□□ 1.7
MSH6-202ENST00000411819 UTP14CQ5TAP6 766 aaKnown RBP25.64■■□□□ 1.7
MSH6-202ENST00000411819 TRIM50Q86XT4 487 aa25.64■■□□□ 1.7
MSH6-202ENST00000411819 ATP6V0A1Q93050 837 aa25.64■■□□□ 1.7
MSH6-202ENST00000411819 GPR20Q99678 358 aa25.64■■□□□ 1.7
MSH6-202ENST00000411819 RBM28Q9NW13 759 aaKnown RBP25.64■■□□□ 1.7
MSH6-202ENST00000411819 ZNF215Q9UL58 517 aaPredicted RBP25.64■■□□□ 1.7
MSH6-202ENST00000411819 CNTNAP5Q8WYK1 1306 aa25.63■■□□□ 1.69
MSH6-202ENST00000411819 CXCL10P02778 98 aa25.63■■□□□ 1.69
MSH6-202ENST00000411819 THPOP40225 353 aa25.63■■□□□ 1.69
MSH6-202ENST00000411819 CCDC85BQ15834 202 aaPredicted RBP25.63■■□□□ 1.69
MSH6-202ENST00000411819 ADCK5Q3MIX3 580 aa25.63■■□□□ 1.69
MSH6-202ENST00000411819 DHX32Q7L7V1 743 aaKnown RBP25.63■■□□□ 1.69
MSH6-202ENST00000411819 SERINC5Q86VE9 423 aa25.63■■□□□ 1.69
MSH6-202ENST00000411819 RASEFQ8IZ41 740 aa25.63■■□□□ 1.69
MSH6-202ENST00000411819 CERS4Q9HA82 394 aa25.63■■□□□ 1.69
MSH6-202ENST00000411819 PRDM6Q9NQX0 595 aa25.63■■□□□ 1.69
MSH6-202ENST00000411819 ZBTB43O43298 467 aa25.62■■□□□ 1.69
MSH6-202ENST00000411819 TLL1O43897 1013 aa25.62■■□□□ 1.69
MSH6-202ENST00000411819 KRT32Q14532 448 aa25.62■■□□□ 1.69
MSH6-202ENST00000411819 RTN1Q16799 776 aa25.62■■□□□ 1.69
MSH6-202ENST00000411819 MICALL1Q8N3F8 863 aa25.62■■□□□ 1.69
MSH6-202ENST00000411819 GPRASP2Q96D09 838 aa25.62■■□□□ 1.69
MSH6-202ENST00000411819 SENP7Q9BQF6 1050 aa25.62■■□□□ 1.69
MSH6-202ENST00000411819 NAP1L2Q9ULW6 460 aaPredicted RBP25.62■■□□□ 1.69
MSH6-202ENST00000411819 TELO2Q9Y4R8 837 aa25.62■■□□□ 1.69
MSH6-202ENST00000411819 NAPAP54920 295 aa25.61■■□□□ 1.69
MSH6-202ENST00000411819 DEFB103AP81534 67 aa25.61■■□□□ 1.69
MSH6-202ENST00000411819 EXOSC10Q01780 885 aaKnown RBP25.61■■□□□ 1.69
MSH6-202ENST00000411819 WWC2Q6AWC2 1192 aa25.61■■□□□ 1.69
MSH6-202ENST00000411819 TRAF7Q6Q0C0 670 aa25.61■■□□□ 1.69
MSH6-202ENST00000411819 TMCO2Q7Z6W1 182 aaPredicted RBP25.61■■□□□ 1.69
MSH6-202ENST00000411819 GIMAP8Q8ND71 665 aaPredicted RBP25.61■■□□□ 1.69
MSH6-202ENST00000411819 CDHR1Q96JP9 859 aa25.61■■□□□ 1.69
MSH6-202ENST00000411819 ZBED2Q9BTP6 218 aa25.61■■□□□ 1.69
MSH6-202ENST00000411819 RNPEPQ9H4A4 650 aa25.61■■□□□ 1.69
MSH6-202ENST00000411819 EHMT1Q9H9B1 1298 aa25.61■■□□□ 1.69
MSH6-202ENST00000411819 PKD2L1Q9P0L9 805 aa25.61■■□□□ 1.69
MSH6-202ENST00000411819 BRPF3Q9ULD4 1205 aa25.61■■□□□ 1.69
MSH6-202ENST00000411819 PCDHA6Q9UN73 950 aa25.61■■□□□ 1.69
MSH6-202ENST00000411819 PCDHA8Q9Y5H6 950 aa25.61■■□□□ 1.69
MSH6-202ENST00000411819 KLF18A0A0U1RQI7 1052 aa25.6■■□□□ 1.69
MSH6-202ENST00000411819 GOLGA8AA7E2F4 631 aa25.6■■□□□ 1.69
MSH6-202ENST00000411819 GOLGA8BA8MQT2 603 aa25.6■■□□□ 1.69
MSH6-202ENST00000411819 RBAK-RBAKDNI3L0D1 243 aa25.6■■□□□ 1.69
MSH6-202ENST00000411819 TREHO43280 583 aa25.6■■□□□ 1.69
MSH6-202ENST00000411819 FGD1P98174 961 aa25.6■■□□□ 1.69
MSH6-202ENST00000411819 MBTPS1Q14703 1052 aa25.6■■□□□ 1.69
MSH6-202ENST00000411819 TCTN1Q2MV58 587 aa25.6■■□□□ 1.69
MSH6-202ENST00000411819 CCDC136Q96JN2 1154 aa25.6■■□□□ 1.69
MSH6-202ENST00000411819 SETD4Q9NVD3 440 aa25.6■■□□□ 1.69
MSH6-202ENST00000411819 EMSYQ7Z589 1322 aa25.6■■□□□ 1.69
MSH6-202ENST00000411819 ABHD14A-ACY1A0A1B0GW23 586 aa25.59■■□□□ 1.69
MSH6-202ENST00000411819 RSPH10B2B2RC85 870 aa25.59■■□□□ 1.69
MSH6-202ENST00000411819 RSPH10BP0C881 870 aa25.59■■□□□ 1.69
MSH6-202ENST00000411819 GNAT1P11488 350 aa25.59■■□□□ 1.69
MSH6-202ENST00000411819 MTMR1Q13613 665 aa25.59■■□□□ 1.69
MSH6-202ENST00000411819 IKBKEQ14164 716 aa25.59■■□□□ 1.69
MSH6-202ENST00000411819 TSGA10IPQ3SY00 556 aa25.59■■□□□ 1.69
MSH6-202ENST00000411819 KAT6AQ92794 2004 aa25.59■■□□□ 1.69
MSH6-202ENST00000411819 CHD7Q9P2D1 2997 aa25.58■■□□□ 1.69
MSH6-202ENST00000411819 RFXAPO00287 272 aa25.58■■□□□ 1.69
MSH6-202ENST00000411819 EFCAB14O75071 495 aa25.58■■□□□ 1.69
MSH6-202ENST00000411819 LGR5O75473 907 aa25.58■■□□□ 1.69
MSH6-202ENST00000411819 ARHGEF15O94989 841 aa25.58■■□□□ 1.69
MSH6-202ENST00000411819 CTSHP09668 335 aa25.58■■□□□ 1.69
MSH6-202ENST00000411819 KCNA2P16389 499 aa25.58■■□□□ 1.69
MSH6-202ENST00000411819 ITGB5P18084 799 aa25.58■■□□□ 1.69
MSH6-202ENST00000411819 HOXC8P31273 242 aa25.58■■□□□ 1.69
MSH6-202ENST00000411819 TCF7P36402 384 aaPredicted RBP25.58■■□□□ 1.69
MSH6-202ENST00000411819 TAP1Q03518 808 aa25.58■■□□□ 1.69
MSH6-202ENST00000411819 ARNTL2Q8WYA1 636 aa25.58■■□□□ 1.69
MSH6-202ENST00000411819 THEGQ9P2T0 379 aa25.58■■□□□ 1.69
MSH6-202ENST00000411819 ATP9AO75110 1047 aa25.57■■□□□ 1.68
MSH6-202ENST00000411819 HMGB1P09429 215 aaKnown RBP25.57■■□□□ 1.68
MSH6-202ENST00000411819 ARHGAP4P98171 946 aa25.57■■□□□ 1.68
MSH6-202ENST00000411819 PPP1R18Q6NYC8 613 aa25.57■■□□□ 1.68
MSH6-202ENST00000411819 UBIAD1Q9Y5Z9 338 aa25.57■■□□□ 1.68
MSH6-202ENST00000411819 MICAL3Q7RTP6 2002 aa25.57■■□□□ 1.68
MSH6-202ENST00000411819 COL4A4P53420 1690 aaPredicted RBP25.57■■□□□ 1.68
MSH6-202ENST00000411819 VCANP13611 3396 aa25.56■■□□□ 1.68
MSH6-202ENST00000411819 GTPBP6O43824 516 aaPredicted RBP25.56■■□□□ 1.68
MSH6-202ENST00000411819 ADCY7P51828 1080 aa25.56■■□□□ 1.68
MSH6-202ENST00000411819 TYW1BQ6NUM6 668 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms