RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 PUS7Q96PZ0 661 aaKnown RBP3.64□□□□□ -1.83
RNU6-1140P-201ENST00000410517 MRPL4Q9BYD3 311 aaKnown RBP3.64□□□□□ -1.83
RNU6-1140P-201ENST00000410517 BRINP2Q9C0B6 783 aa3.64□□□□□ -1.83
RNU6-1140P-201ENST00000410517 NOL6Q9H6R4 1146 aaKnown RBP3.64□□□□□ -1.83
RNU6-1140P-201ENST00000410517 SPC25Q9HBM1 224 aa3.64□□□□□ -1.83
RNU6-1140P-201ENST00000410517 FAM86C1Q9NVL1 165 aa3.64□□□□□ -1.83
RNU6-1140P-201ENST00000410517 ERVK13-1Q9NX77 482 aa3.64□□□□□ -1.83
RNU6-1140P-201ENST00000410517 PCDHB10Q9UN67 800 aa3.64□□□□□ -1.83
RNU6-1140P-201ENST00000410517 A0A1W2PQJ5 194 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 FAM221BA6H8Z2 402 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 C9IYK1 514 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 F8W031 263 aaPredicted RBP3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 PLD2O14939 933 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 CBFA2T2O43439 604 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 DNAJC6O75061 913 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 TBC1D8O95759 1140 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 SNRPB2P08579 225 aaKnown RBP3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 DBHP09172 617 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 BMP8BP34820 402 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 SOX5P35711 763 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 SEPHS1P49903 392 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 GTF2A2P52657 109 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 ANAPC15P60006 121 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 KRTAP10-9P60411 292 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 PPP2R2AP63151 447 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 GABREP78334 506 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 KCNAB2Q13303 367 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 FNDC3BQ53EP0 1204 aaKnown RBP3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 CT47A1Q5JQC4 288 aaPredicted RBP3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 EEF1DP3Q658K8 133 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 DCAF15Q66K64 600 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 E4F1Q66K89 784 aaPredicted RBP3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 WWC2Q6AWC2 1192 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 NSMFQ6X4W1 530 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 ZNF227Q86WZ6 799 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 AHI1Q8N157 1196 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 ARHGEF39Q8N4T4 335 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 NAT16Q8N8M0 369 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 JMYQ8N9B5 988 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 ZBTB8AQ96BR9 441 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 RNPC3Q96LT9 517 aaKnown RBP3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 FGD4Q96M96 766 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 CRAMP1Q96RY5 1269 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 JMJD8Q96S16 334 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 ZFYVE21Q9BQ24 234 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 DHRS4Q9BTZ2 278 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 CDADC1Q9BWV3 514 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 GFOD1Q9NXC2 390 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 PPP4R1LQ9P1A2 415 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 CGGBP1Q9UFW8 167 aaPredicted RBP3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 SFMBT1Q9UHJ3 866 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 DBR1Q9UK59 544 aaKnown RBP3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 EMC9Q9Y3B6 208 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 BACE2Q9Y5Z0 518 aa3.63□□□□□ -1.83
RNU6-1140P-201ENST00000410517 SYNJ2O15056 1496 aa3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 TOPBP1Q92547 1522 aa3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 hCG_2014768A0A024R1R8 64 aa3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 A0A1W2PQU0 124 aa3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 NPEPPSL1A6NEC2 478 aa3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 MROH6A6NGR9 719 aa3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 MUSKO15146 869 aa3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 GSTA4O15217 222 aa3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 RFPL3O75679 317 aa3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 KCNH1O95259 989 aa3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 ABHD18Q0P651 414 aa3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 SMAD4Q13485 552 aaKnown RBP3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 PPP2R5DQ14738 602 aa3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 ACBD5Q5T8D3 534 aaPredicted RBP3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 EGFLAMQ63HQ2 1017 aa3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 BICRALQ6AI39 1079 aa3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 MRM1Q6IN84 353 aaKnown RBP3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 DPY19L2P1Q6NXN4 242 aa3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 RSPO2Q6UXX9 243 aaPredicted RBP3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 SPATC1Q76KD6 591 aa3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 PPM1KQ8N3J5 372 aa3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 ADCY4Q8NFM4 1077 aa3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 ALG3Q92685 438 aa3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 MFSD3Q96ES6 412 aa3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 ZDHHC15Q96MV8 337 aa3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 NKX2-4Q9H2Z4 354 aa3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 CYP26B1Q9NR63 512 aa3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 INTS7Q9NVH2 962 aaKnown RBP3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 TCAF1Q9Y4C2 921 aa3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 ZNF451Q9Y4E5 1061 aa3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 NUB1Q9Y5A7 615 aa3.62□□□□□ -1.83
RNU6-1140P-201ENST00000410517 GRIN2BQ13224 1484 aa3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 GAPVD1Q14C86 1478 aa3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 TOP2AP11388 1531 aaKnown RBP3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 ZNF608Q9ULD9 1512 aaPredicted RBP3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 DNMBPQ6XZF7 1577 aa3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 LOC105371045A0A1W2PR82 267 aa3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 ESYT3A0FGR9 886 aa3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 MEFVO15553 781 aaPredicted RBP3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 PRODHO43272 600 aa3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 SRGAP3O43295 1099 aa3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 LAMTOR5O43504 91 aa3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 PRAMEF1O95521 474 aa3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 ASMTLO95671 621 aa3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 ITGAVP06756 1048 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms