RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 FBXL21Q9UKT6 434 aa6.46□□□□□ -1.37
CLK1-202ENST00000409403 SUGT1Q9Y2Z0 365 aa6.46□□□□□ -1.37
CLK1-202ENST00000409403 CACNA1AO00555 2505 aa6.46□□□□□ -1.38
CLK1-202ENST00000409403 NPC1L1Q9UHC9 1359 aa6.46□□□□□ -1.38
CLK1-202ENST00000409403 SBNO2Q9Y2G9 1366 aa6.46□□□□□ -1.38
CLK1-202ENST00000409403 PIK3C2GO75747 1445 aa6.46□□□□□ -1.38
CLK1-202ENST00000409403 DAPK1P53355 1430 aa6.46□□□□□ -1.38
CLK1-202ENST00000409403 CRB1P82279 1406 aa6.46□□□□□ -1.38
CLK1-202ENST00000409403 ANKRD62A6NC57 917 aa6.45□□□□□ -1.38
CLK1-202ENST00000409403 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.45□□□□□ -1.38
CLK1-202ENST00000409403 ADCY3O60266 1144 aa6.45□□□□□ -1.38
CLK1-202ENST00000409403 MBD3O95983 291 aa6.45□□□□□ -1.38
CLK1-202ENST00000409403 ADMP35318 185 aa6.45□□□□□ -1.38
CLK1-202ENST00000409403 KIR3DL1P43629 444 aa6.45□□□□□ -1.38
CLK1-202ENST00000409403 CYP27A1Q02318 531 aa6.45□□□□□ -1.38
CLK1-202ENST00000409403 ZSCAN23Q3MJ62 389 aa6.45□□□□□ -1.38
CLK1-202ENST00000409403 CYP27C1Q4G0S4 372 aa6.45□□□□□ -1.38
CLK1-202ENST00000409403 PRR23CQ6ZRP0 262 aa6.45□□□□□ -1.38
CLK1-202ENST00000409403 WAPLQ7Z5K2 1190 aa6.45□□□□□ -1.38
CLK1-202ENST00000409403 COL23A1Q86Y22 540 aaPredicted RBP6.45□□□□□ -1.38
CLK1-202ENST00000409403 ZBTB38Q8NAP3 1195 aaPredicted RBP6.45□□□□□ -1.38
CLK1-202ENST00000409403 FAM184AQ8NB25 1140 aa6.45□□□□□ -1.38
CLK1-202ENST00000409403 LRRN4CLQ8ND94 238 aa6.45□□□□□ -1.38
CLK1-202ENST00000409403 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.45□□□□□ -1.38
CLK1-202ENST00000409403 C5P01031 1676 aa6.45□□□□□ -1.38
CLK1-202ENST00000409403 CNTNAP4Q9C0A0 1308 aa6.45□□□□□ -1.38
CLK1-202ENST00000409403 A0A1W2PQU0 124 aa6.45□□□□□ -1.38
CLK1-202ENST00000409403 LRRN2O75325 713 aa6.45□□□□□ -1.38
CLK1-202ENST00000409403 ITGB2P05107 769 aa6.45□□□□□ -1.38
CLK1-202ENST00000409403 FAM153BP0C7A2 387 aa6.45□□□□□ -1.38
CLK1-202ENST00000409403 KCNJ4P48050 445 aa6.45□□□□□ -1.38
CLK1-202ENST00000409403 ZC3H12BQ5HYM0 836 aaKnown RBP6.45□□□□□ -1.38
CLK1-202ENST00000409403 NOL9Q5SY16 702 aaKnown RBP6.45□□□□□ -1.38
CLK1-202ENST00000409403 LRSAM1Q6UWE0 723 aa6.45□□□□□ -1.38
CLK1-202ENST00000409403 FAM214BQ7L5A3 538 aa6.45□□□□□ -1.38
CLK1-202ENST00000409403 ZNF513Q8N8E2 541 aaPredicted RBP6.45□□□□□ -1.38
CLK1-202ENST00000409403 ANKRD7Q92527 254 aa6.45□□□□□ -1.38
CLK1-202ENST00000409403 PRR13Q9NZ81 148 aa6.45□□□□□ -1.38
CLK1-202ENST00000409403 RNF181Q9P0P0 153 aa6.45□□□□□ -1.38
CLK1-202ENST00000409403 KCNH3Q9ULD8 1083 aa6.45□□□□□ -1.38
CLK1-202ENST00000409403 RGPD5Q99666 1765 aa6.45□□□□□ -1.38
CLK1-202ENST00000409403 KIF1BO60333 1816 aa6.45□□□□□ -1.38
CLK1-202ENST00000409403 TAF1LQ8IZX4 1826 aa6.44□□□□□ -1.38
CLK1-202ENST00000409403 A0A087WZG4 1122 aa6.44□□□□□ -1.38
CLK1-202ENST00000409403 VGLL3A8MV65 326 aa6.44□□□□□ -1.38
CLK1-202ENST00000409403 IGF2BP3O00425 579 aaKnown RBP eCLIP6.44□□□□□ -1.38
CLK1-202ENST00000409403 NOP56O00567 594 aaKnown RBP6.44□□□□□ -1.38
CLK1-202ENST00000409403 BAG4O95429 457 aaKnown RBP6.44□□□□□ -1.38
CLK1-202ENST00000409403 CBX7O95931 251 aa6.44□□□□□ -1.38
CLK1-202ENST00000409403 ITGAVP06756 1048 aa6.44□□□□□ -1.38
CLK1-202ENST00000409403 SNW1Q13573 536 aaKnown RBP6.44□□□□□ -1.38
CLK1-202ENST00000409403 TMEM67Q5HYA8 995 aa6.44□□□□□ -1.38
CLK1-202ENST00000409403 RNF43Q68DV7 783 aa6.44□□□□□ -1.38
CLK1-202ENST00000409403 C22orf34Q6ZV56 151 aa6.44□□□□□ -1.38
CLK1-202ENST00000409403 C16orf86Q6ZW13 317 aa6.44□□□□□ -1.38
CLK1-202ENST00000409403 ZNF227Q86WZ6 799 aa6.44□□□□□ -1.38
CLK1-202ENST00000409403 CRACR2BQ8N4Y2 399 aaPredicted RBP6.44□□□□□ -1.38
CLK1-202ENST00000409403 FBXL6Q8N531 539 aa6.44□□□□□ -1.38
CLK1-202ENST00000409403 DTWD2Q8NBA8 298 aa6.44□□□□□ -1.38
CLK1-202ENST00000409403 BVESQ8NE79 360 aa6.44□□□□□ -1.38
CLK1-202ENST00000409403 ADCY4Q8NFM4 1077 aa6.44□□□□□ -1.38
CLK1-202ENST00000409403 RCC1LQ96I51 464 aaKnown RBP6.44□□□□□ -1.38
CLK1-202ENST00000409403 Q96M66 194 aa6.44□□□□□ -1.38
CLK1-202ENST00000409403 MFSD14AQ96MC6 490 aa6.44□□□□□ -1.38
CLK1-202ENST00000409403 HEXIM2Q96MH2 286 aaKnown RBP6.44□□□□□ -1.38
CLK1-202ENST00000409403 PRDM14Q9GZV8 571 aa6.44□□□□□ -1.38
CLK1-202ENST00000409403 PANK3Q9H999 370 aa6.44□□□□□ -1.38
CLK1-202ENST00000409403 SPTLC3Q9NUV7 552 aa6.44□□□□□ -1.38
CLK1-202ENST00000409403 GEMIN8Q9NWZ8 242 aaKnown RBP6.44□□□□□ -1.38
CLK1-202ENST00000409403 FHOD1Q9Y613 1164 aa6.44□□□□□ -1.38
CLK1-202ENST00000409403 MSTNO14793 375 aa6.43□□□□□ -1.38
CLK1-202ENST00000409403 ZNF865P0CJ78 1059 aaPredicted RBP6.43□□□□□ -1.38
CLK1-202ENST00000409403 MAP2K1Q02750 393 aaPredicted RBP6.43□□□□□ -1.38
CLK1-202ENST00000409403 ATP2B3Q16720 1220 aa6.43□□□□□ -1.38
CLK1-202ENST00000409403 POMZP3Q6PJE2 187 aa6.43□□□□□ -1.38
CLK1-202ENST00000409403 ZNF765Q7L2R6 523 aa6.43□□□□□ -1.38
CLK1-202ENST00000409403 SYNPOQ8N3V7 929 aa6.43□□□□□ -1.38
CLK1-202ENST00000409403 ZNF622Q969S3 477 aaKnown RBP eCLIP6.43□□□□□ -1.388e-9■■■■□ 20.1
CLK1-202ENST00000409403 ARHGEF4Q9NR80 690 aa6.43□□□□□ -1.38
CLK1-202ENST00000409403 USP6P35125 1406 aa6.43□□□□□ -1.38
CLK1-202ENST00000409403 ST20-MTHFSA0A0A6YYL1 179 aa6.42□□□□□ -1.38
CLK1-202ENST00000409403 TRAV20A0A0B4J274 112 aa6.42□□□□□ -1.38
CLK1-202ENST00000409403 FAM170BA6NMN3 283 aa6.42□□□□□ -1.38
CLK1-202ENST00000409403 TULP2O00295 520 aa6.42□□□□□ -1.38
CLK1-202ENST00000409403 MMP14P50281 582 aa6.42□□□□□ -1.38
CLK1-202ENST00000409403 PPP2R2AP63151 447 aa6.42□□□□□ -1.38
CLK1-202ENST00000409403 NOLC1Q14978 699 aaKnown RBP eCLIP6.42□□□□□ -1.38
CLK1-202ENST00000409403 CAVIN1Q6NZI2 390 aaKnown RBP6.42□□□□□ -1.38
CLK1-202ENST00000409403 KIAA0907Q7Z7F0 614 aaPredicted RBP6.42□□□□□ -1.38
CLK1-202ENST00000409403 MFSD4AQ8N468 514 aa6.42□□□□□ -1.38
CLK1-202ENST00000409403 ARHGEF39Q8N4T4 335 aa6.42□□□□□ -1.38
CLK1-202ENST00000409403 PIWIL2Q8TC59 973 aaKnown RBP6.42□□□□□ -1.38
CLK1-202ENST00000409403 SYTL5Q8TDW5 730 aaPredicted RBP6.42□□□□□ -1.38
CLK1-202ENST00000409403 BRF1Q92994 677 aa6.42□□□□□ -1.38
CLK1-202ENST00000409403 PUS7Q96PZ0 661 aaKnown RBP6.42□□□□□ -1.38
CLK1-202ENST00000409403 SPOCK3Q9BQ16 436 aa6.42□□□□□ -1.38
CLK1-202ENST00000409403 AARSD1Q9BTE6 412 aaKnown RBP6.42□□□□□ -1.38
CLK1-202ENST00000409403 ASCC2Q9H1I8 757 aaPredicted RBP6.42□□□□□ -1.38
CLK1-202ENST00000409403 TPSG1Q9NRR2 321 aa6.42□□□□□ -1.38
CLK1-202ENST00000409403 GFOD1Q9NXC2 390 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms