RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 CDKL2Q92772 493 aa27.23■■□□□ 1.95
SPIRE1-202ENST00000409402 FAM167AQ96KS9 214 aa27.23■■□□□ 1.95
SPIRE1-202ENST00000409402 FAM49AQ9H0Q0 323 aaPredicted RBP27.23■■□□□ 1.95
SPIRE1-202ENST00000409402 PASKQ96RG2 1323 aa27.23■■□□□ 1.95
SPIRE1-202ENST00000409402 ELF1P32519 619 aa27.23■■□□□ 1.95
SPIRE1-202ENST00000409402 CCDC13Q8IYE1 715 aa27.23■■□□□ 1.95
SPIRE1-202ENST00000409402 CPSF3Q9UKF6 684 aaKnown RBP27.23■■□□□ 1.95
SPIRE1-202ENST00000409402 CSPG5O95196 566 aa27.22■■□□□ 1.95
SPIRE1-202ENST00000409402 MAPK4P31152 587 aa27.22■■□□□ 1.95
SPIRE1-202ENST00000409402 RASSF7Q02833 373 aa27.22■■□□□ 1.95
SPIRE1-202ENST00000409402 JCADQ9P266 1359 aa27.22■■□□□ 1.95
SPIRE1-202ENST00000409402 ZBTB5O15062 677 aa27.22■■□□□ 1.95
SPIRE1-202ENST00000409402 ARMCX2Q7L311 632 aa27.22■■□□□ 1.95
SPIRE1-202ENST00000409402 GCNAQ96QF7 691 aa27.22■■□□□ 1.95
SPIRE1-202ENST00000409402 PKP1Q13835 747 aa27.22■■□□□ 1.95
SPIRE1-202ENST00000409402 SKA2Q8WVK7 121 aaPredicted RBP27.22■■□□□ 1.95
SPIRE1-202ENST00000409402 DPH5Q9H2P9 285 aa27.22■■□□□ 1.95
SPIRE1-202ENST00000409402 SRPRBQ9Y5M8 271 aaKnown RBP27.22■■□□□ 1.95
SPIRE1-202ENST00000409402 MAD1L1Q9Y6D9 718 aa27.22■■□□□ 1.95
SPIRE1-202ENST00000409402 K7ERI5 159 aa27.22■■□□□ 1.95
SPIRE1-202ENST00000409402 IGKV5-2P06315 115 aa27.22■■□□□ 1.95
SPIRE1-202ENST00000409402 PLCG1P19174 1290 aa27.22■■□□□ 1.95
SPIRE1-202ENST00000409402 SIX6OS1Q8N1H7 587 aa27.22■■□□□ 1.95
SPIRE1-202ENST00000409402 LINC00301Q8NCQ3 95 aa27.21■■□□□ 1.95
SPIRE1-202ENST00000409402 MSTO1Q9BUK6 570 aa27.21■■□□□ 1.95
SPIRE1-202ENST00000409402 MROH7-TTC4A0A0A0MT08 1334 aa27.21■■□□□ 1.95
SPIRE1-202ENST00000409402 USP17L10C9JJH3 530 aa27.21■■□□□ 1.95
SPIRE1-202ENST00000409402 TROVE2P10155 538 aaKnown RBP eCLIP27.21■■□□□ 1.95
SPIRE1-202ENST00000409402 CYP2D6P10635 497 aa27.21■■□□□ 1.95
SPIRE1-202ENST00000409402 CASP14P31944 242 aa27.21■■□□□ 1.95
SPIRE1-202ENST00000409402 DDIT3P35638 169 aa27.21■■□□□ 1.95
SPIRE1-202ENST00000409402 DSTYKQ6XUX3 929 aa27.21■■□□□ 1.95
SPIRE1-202ENST00000409402 TAB3Q8N5C8 712 aaPredicted RBP27.21■■□□□ 1.95
SPIRE1-202ENST00000409402 RMDN3Q96TC7 470 aa27.21■■□□□ 1.95
SPIRE1-202ENST00000409402 UBN2Q6ZU65 1347 aa27.21■■□□□ 1.95
SPIRE1-202ENST00000409402 GOLGA8SH3BPF8 625 aa27.21■■□□□ 1.95
SPIRE1-202ENST00000409402 HGSO14964 777 aaPredicted RBP27.21■■□□□ 1.95
SPIRE1-202ENST00000409402 GBP1P32455 592 aa27.21■■□□□ 1.95
SPIRE1-202ENST00000409402 MTMR1Q13613 665 aa27.21■■□□□ 1.95
SPIRE1-202ENST00000409402 ARL6IP4Q66PJ3 421 aaKnown RBP27.21■■□□□ 1.95
SPIRE1-202ENST00000409402 CATSPER4Q7RTX7 472 aa27.21■■□□□ 1.95
SPIRE1-202ENST00000409402 MGARPQ8TDB4 240 aa27.21■■□□□ 1.95
SPIRE1-202ENST00000409402 ARHGEF2Q92974 986 aaKnown RBP27.21■■□□□ 1.95
SPIRE1-202ENST00000409402 RAVER2Q9HCJ3 691 aaKnown RBP27.21■■□□□ 1.95
SPIRE1-202ENST00000409402 PCDHA6Q9UN73 950 aa27.21■■□□□ 1.95
SPIRE1-202ENST00000409402 PCDHA8Q9Y5H6 950 aa27.21■■□□□ 1.95
SPIRE1-202ENST00000409402 KRT10P13645 584 aa27.2■■□□□ 1.95
SPIRE1-202ENST00000409402 SNRNP48Q6IEG0 339 aaKnown RBP27.2■■□□□ 1.95
SPIRE1-202ENST00000409402 UTYO14607 1347 aa27.2■■□□□ 1.95
SPIRE1-202ENST00000409402 PLEKHA8P1O95397 391 aa27.2■■□□□ 1.94
SPIRE1-202ENST00000409402 MXI1P50539 228 aa27.2■■□□□ 1.94
SPIRE1-202ENST00000409402 EN1Q05925 392 aaPredicted RBP27.2■■□□□ 1.94
SPIRE1-202ENST00000409402 RNF40O75150 1001 aa27.2■■□□□ 1.94
SPIRE1-202ENST00000409402 SMYD4Q8IYR2 804 aaPredicted RBP27.2■■□□□ 1.94
SPIRE1-202ENST00000409402 ZBED2Q9BTP6 218 aa27.2■■□□□ 1.94
SPIRE1-202ENST00000409402 GCNT4Q9P109 453 aa27.2■■□□□ 1.94
SPIRE1-202ENST00000409402 LRRN2O75325 713 aa27.2■■□□□ 1.94
SPIRE1-202ENST00000409402 ARL4AP40617 200 aa27.2■■□□□ 1.94
SPIRE1-202ENST00000409402 PSMD6Q15008 389 aa27.2■■□□□ 1.94
SPIRE1-202ENST00000409402 RPUSD2Q8IZ73 545 aaKnown RBP27.2■■□□□ 1.94
SPIRE1-202ENST00000409402 PKNOX2Q96KN3 472 aa27.2■■□□□ 1.94
SPIRE1-202ENST00000409402 SP8Q8IXZ3 490 aa27.19■■□□□ 1.94
SPIRE1-202ENST00000409402 CACNA2D3Q8IZS8 1091 aa27.19■■□□□ 1.94
SPIRE1-202ENST00000409402 GPSM2P81274 684 aa27.19■■□□□ 1.94
SPIRE1-202ENST00000409402 TMTC3Q6ZXV5 915 aa27.19■■□□□ 1.94
SPIRE1-202ENST00000409402 TRIM56Q9BRZ2 755 aaKnown RBP27.19■■□□□ 1.94
SPIRE1-202ENST00000409402 UBE2TQ9NPD8 197 aaPredicted RBP27.19■■□□□ 1.94
SPIRE1-202ENST00000409402 CAPN12Q6ZSI9 719 aa27.19■■□□□ 1.94
SPIRE1-202ENST00000409402 MRPL47Q9HD33 250 aaKnown RBP27.19■■□□□ 1.94
SPIRE1-202ENST00000409402 CPDO75976 1380 aa27.19■■□□□ 1.94
SPIRE1-202ENST00000409402 GSTA1P08263 222 aa27.19■■□□□ 1.94
SPIRE1-202ENST00000409402 GSTA2P09210 222 aa27.19■■□□□ 1.94
SPIRE1-202ENST00000409402 HOXD10P28358 340 aa27.19■■□□□ 1.94
SPIRE1-202ENST00000409402 DNAJC24Q6P3W2 148 aa27.19■■□□□ 1.94
SPIRE1-202ENST00000409402 RWDD2AQ9UIY3 292 aa27.19■■□□□ 1.94
SPIRE1-202ENST00000409402 CYP2E1P05181 493 aaPredicted RBP27.19■■□□□ 1.94
SPIRE1-202ENST00000409402 EHHADHQ08426 723 aa27.19■■□□□ 1.94
SPIRE1-202ENST00000409402 EPHA10Q5JZY3 1008 aa27.19■■□□□ 1.94
SPIRE1-202ENST00000409402 MAN1B1Q9UKM7 699 aa27.19■■□□□ 1.94
SPIRE1-202ENST00000409402 PCDHB6Q9Y5E3 794 aa27.19■■□□□ 1.94
SPIRE1-202ENST00000409402 RCSD1Q6JBY9 416 aa27.18■■□□□ 1.94
SPIRE1-202ENST00000409402 SGK1O00141 431 aa27.18■■□□□ 1.94
SPIRE1-202ENST00000409402 CDC25AP30304 524 aa27.18■■□□□ 1.94
SPIRE1-202ENST00000409402 S100BP04271 92 aaPredicted RBP27.18■■□□□ 1.94
SPIRE1-202ENST00000409402 SAT1P21673 171 aa27.18■■□□□ 1.94
SPIRE1-202ENST00000409402 IQCA1LA6NCM1 817 aa27.18■■□□□ 1.94
SPIRE1-202ENST00000409402 NFX1Q12986 1120 aaKnown RBP27.18■■□□□ 1.94
SPIRE1-202ENST00000409402 ANKRD13CQ8N6S4 541 aa27.18■■□□□ 1.94
SPIRE1-202ENST00000409402 TMEM47Q9BQJ4 181 aa27.18■■□□□ 1.94
SPIRE1-202ENST00000409402 HOMER3Q9NSC5 361 aa27.18■■□□□ 1.94
SPIRE1-202ENST00000409402 PPFIA4O75335 1185 aa27.17■■□□□ 1.94
SPIRE1-202ENST00000409402 RNF139Q8WU17 664 aa27.17■■□□□ 1.94
SPIRE1-202ENST00000409402 CABS1Q96KC9 395 aa27.17■■□□□ 1.94
SPIRE1-202ENST00000409402 LDHAP00338 332 aaKnown RBP27.17■■□□□ 1.94
SPIRE1-202ENST00000409402 OR6B2Q6IFH4 312 aa27.17■■□□□ 1.94
SPIRE1-202ENST00000409402 MICAL1Q8TDZ2 1067 aa27.17■■□□□ 1.94
SPIRE1-202ENST00000409402 NSUN6Q8TEA1 469 aaKnown RBP27.17■■□□□ 1.94
SPIRE1-202ENST00000409402 HEXIM2Q96MH2 286 aaKnown RBP27.17■■□□□ 1.94
SPIRE1-202ENST00000409402 ATP6V0A4Q9HBG4 840 aa27.17■■□□□ 1.94
SPIRE1-202ENST00000409402 ABCB11O95342 1321 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms