RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 PPTC7Q8NI37 304 aa11.71□□□□□ -0.53
TSPAN9-202ENST00000407263 TBCKQ8TEA7 893 aa11.71□□□□□ -0.53
TSPAN9-202ENST00000407263 CRYGNQ8WXF5 182 aa11.71□□□□□ -0.53
TSPAN9-202ENST00000407263 MTG1Q9BT17 334 aaPredicted RBP11.71□□□□□ -0.53
TSPAN9-202ENST00000407263 KCNH7Q9NS40 1196 aa11.71□□□□□ -0.53
TSPAN9-202ENST00000407263 GBF1Q92538 1859 aa11.7□□□□□ -0.54
TSPAN9-202ENST00000407263 ELP1O95163 1332 aa11.7□□□□□ -0.54
TSPAN9-202ENST00000407263 IGLV3-22A0A075B6J6 115 aa11.7□□□□□ -0.54
TSPAN9-202ENST00000407263 CCDC194A0A1B0GVG4 234 aa11.7□□□□□ -0.54
TSPAN9-202ENST00000407263 M0R2N6 131 aa11.7□□□□□ -0.54
TSPAN9-202ENST00000407263 TDP2O95551 362 aa11.7□□□□□ -0.54
TSPAN9-202ENST00000407263 MMP1P03956 469 aa11.7□□□□□ -0.54
TSPAN9-202ENST00000407263 HMGN5P82970 282 aaKnown RBP11.7□□□□□ -0.54
TSPAN9-202ENST00000407263 TLE2Q04725 743 aa11.7□□□□□ -0.54
TSPAN9-202ENST00000407263 NR5A1Q13285 461 aa11.7□□□□□ -0.54
TSPAN9-202ENST00000407263 ITGA7Q13683 1181 aa11.7□□□□□ -0.54
TSPAN9-202ENST00000407263 NEDD9Q14511 834 aa11.7□□□□□ -0.54
TSPAN9-202ENST00000407263 NONOQ15233 471 aaKnown RBP eCLIP11.7□□□□□ -0.54
TSPAN9-202ENST00000407263 CEP55Q53EZ4 464 aa11.7□□□□□ -0.54
TSPAN9-202ENST00000407263 PRR16Q569H4 304 aa11.7□□□□□ -0.54
TSPAN9-202ENST00000407263 UTP14CQ5TAP6 766 aaKnown RBP11.7□□□□□ -0.54
TSPAN9-202ENST00000407263 KRT40Q6A162 431 aa11.7□□□□□ -0.54
TSPAN9-202ENST00000407263 MCTP2Q6DN12 878 aa11.7□□□□□ -0.54
TSPAN9-202ENST00000407263 METTL7BQ6UX53 244 aa11.7□□□□□ -0.54
TSPAN9-202ENST00000407263 PIK3AP1Q6ZUJ8 805 aa11.7□□□□□ -0.54
TSPAN9-202ENST00000407263 KRT25Q7Z3Z0 450 aa11.7□□□□□ -0.54
TSPAN9-202ENST00000407263 PLA2G4DQ86XP0 818 aa11.7□□□□□ -0.54
TSPAN9-202ENST00000407263 EMID1Q96A84 441 aaPredicted RBP11.7□□□□□ -0.54
TSPAN9-202ENST00000407263 CDHR1Q96JP9 859 aa11.7□□□□□ -0.54
TSPAN9-202ENST00000407263 C8orf76Q96K31 380 aa11.7□□□□□ -0.54
TSPAN9-202ENST00000407263 LLPHQ9BRT6 129 aaKnown RBP11.7□□□□□ -0.54
TSPAN9-202ENST00000407263 BRMS1Q9HCU9 246 aa11.7□□□□□ -0.54
TSPAN9-202ENST00000407263 PDLIM7Q9NR12 457 aa11.7□□□□□ -0.54
TSPAN9-202ENST00000407263 NR2E3Q9Y5X4 410 aa11.7□□□□□ -0.54
TSPAN9-202ENST00000407263 EVPLQ92817 2033 aa11.69□□□□□ -0.54
TSPAN9-202ENST00000407263 GRIN2DO15399 1336 aa11.69□□□□□ -0.54
TSPAN9-202ENST00000407263 ARVCFO00192 962 aa11.69□□□□□ -0.54
TSPAN9-202ENST00000407263 CABYRO75952 493 aa11.69□□□□□ -0.54
TSPAN9-202ENST00000407263 LGALS2P05162 132 aa11.69□□□□□ -0.54
TSPAN9-202ENST00000407263 CYP3A4P08684 503 aa11.69□□□□□ -0.54
TSPAN9-202ENST00000407263 TGFB3P10600 412 aa11.69□□□□□ -0.54
TSPAN9-202ENST00000407263 MCM2P49736 904 aa11.69□□□□□ -0.54
TSPAN9-202ENST00000407263 SETQ01105 290 aaPredicted RBP11.69□□□□□ -0.54
TSPAN9-202ENST00000407263 ITGB3BPQ13352 177 aaPredicted RBP11.69□□□□□ -0.54
TSPAN9-202ENST00000407263 DGKDQ16760 1214 aa11.69□□□□□ -0.54
TSPAN9-202ENST00000407263 EARS2Q5JPH6 523 aaKnown RBP11.69□□□□□ -0.54
TSPAN9-202ENST00000407263 PRPF38BQ5VTL8 546 aaKnown RBP11.69□□□□□ -0.54
TSPAN9-202ENST00000407263 GALNT17Q6IS24 598 aa11.69□□□□□ -0.54
TSPAN9-202ENST00000407263 SH3RF1Q7Z6J0 888 aa11.69□□□□□ -0.54
TSPAN9-202ENST00000407263 DIS3L2Q8IYB7 885 aaKnown RBP11.69□□□□□ -0.54
TSPAN9-202ENST00000407263 FAM177A1Q8N128 213 aaPredicted RBP11.69□□□□□ -0.54
TSPAN9-202ENST00000407263 GPR20Q99678 358 aa11.69□□□□□ -0.54
TSPAN9-202ENST00000407263 SDF4Q9BRK5 362 aa11.69□□□□□ -0.54
TSPAN9-202ENST00000407263 AGO4Q9HCK5 861 aaKnown RBP11.69□□□□□ -0.54
TSPAN9-202ENST00000407263 JPH1Q9HDC5 661 aaPredicted RBP11.69□□□□□ -0.54
TSPAN9-202ENST00000407263 MROH7Q68CQ1 1323 aa11.68□□□□□ -0.54
TSPAN9-202ENST00000407263 EDIL3O43854 480 aa11.68□□□□□ -0.54
TSPAN9-202ENST00000407263 F2P00734 622 aa11.68□□□□□ -0.54
TSPAN9-202ENST00000407263 CLTBP09497 229 aa11.68□□□□□ -0.54
TSPAN9-202ENST00000407263 TCF7P36402 384 aaPredicted RBP11.68□□□□□ -0.54
TSPAN9-202ENST00000407263 MFSD10Q14728 455 aa11.68□□□□□ -0.54
TSPAN9-202ENST00000407263 LETM2Q2VYF4 491 aa11.68□□□□□ -0.54
TSPAN9-202ENST00000407263 NBPF20Q3BBV1 942 aa11.68□□□□□ -0.54
TSPAN9-202ENST00000407263 FAM126BQ8IXS8 530 aa11.68□□□□□ -0.54
TSPAN9-202ENST00000407263 KAT2BQ92831 832 aa11.68□□□□□ -0.54
TSPAN9-202ENST00000407263 GJA10Q969M2 543 aa11.68□□□□□ -0.54
TSPAN9-202ENST00000407263 ZNF577Q9BSK1 485 aa11.68□□□□□ -0.54
TSPAN9-202ENST00000407263 NFASCO94856 1347 aa11.67□□□□□ -0.54
TSPAN9-202ENST00000407263 PTPRSQ13332 1948 aa11.67□□□□□ -0.54
TSPAN9-202ENST00000407263 BTBD18B2RXH4 712 aa11.67□□□□□ -0.54
TSPAN9-202ENST00000407263 MEIS1O00470 390 aa11.67□□□□□ -0.54
TSPAN9-202ENST00000407263 TLR3O15455 904 aaKnown RBP11.67□□□□□ -0.54
TSPAN9-202ENST00000407263 SLC37A4O43826 429 aa11.67□□□□□ -0.54
TSPAN9-202ENST00000407263 B4GALT4O60513 344 aa11.67□□□□□ -0.54
TSPAN9-202ENST00000407263 KPNA6O60684 536 aa11.67□□□□□ -0.54
TSPAN9-202ENST00000407263 HOXD8P13378 290 aaPredicted RBP11.67□□□□□ -0.54
TSPAN9-202ENST00000407263 MARK3P27448 753 aa11.67□□□□□ -0.54
TSPAN9-202ENST00000407263 GJB2P29033 226 aa11.67□□□□□ -0.54
TSPAN9-202ENST00000407263 PSEN2P49810 448 aa11.67□□□□□ -0.54
TSPAN9-202ENST00000407263 MDM2Q00987 491 aaPredicted RBP11.67□□□□□ -0.54
TSPAN9-202ENST00000407263 KIAA0753Q2KHM9 967 aa11.67□□□□□ -0.54
TSPAN9-202ENST00000407263 C1orf53Q5VUE5 145 aa11.67□□□□□ -0.54
TSPAN9-202ENST00000407263 NIPA1Q7RTP0 329 aa11.67□□□□□ -0.54
TSPAN9-202ENST00000407263 NEK8Q86SG6 692 aa11.67□□□□□ -0.54
TSPAN9-202ENST00000407263 GIMAP8Q8ND71 665 aaPredicted RBP11.67□□□□□ -0.54
TSPAN9-202ENST00000407263 TNFRSF25Q93038 417 aa11.67□□□□□ -0.54
TSPAN9-202ENST00000407263 LENG9Q96B70 501 aa11.67□□□□□ -0.54
TSPAN9-202ENST00000407263 SENP7Q9BQF6 1050 aa11.67□□□□□ -0.54
TSPAN9-202ENST00000407263 KATNAL1Q9BW62 490 aa11.67□□□□□ -0.54
TSPAN9-202ENST00000407263 PPP1R12CQ9BZL4 782 aa11.67□□□□□ -0.54
TSPAN9-202ENST00000407263 TRPV6Q9H1D0 765 aa11.67□□□□□ -0.54
TSPAN9-202ENST00000407263 FOXD4L1Q9NU39 408 aa11.67□□□□□ -0.54
TSPAN9-202ENST00000407263 TRMT13Q9NUP7 481 aaKnown RBP11.67□□□□□ -0.54
TSPAN9-202ENST00000407263 SLC9A2Q9UBY0 812 aa11.67□□□□□ -0.54
TSPAN9-202ENST00000407263 PRKAG2Q9UGJ0 569 aa11.67□□□□□ -0.54
TSPAN9-202ENST00000407263 DCDC2CA8MYV0 355 aa11.66□□□□□ -0.54
TSPAN9-202ENST00000407263 KIF28PB7ZC32 967 aa11.66□□□□□ -0.54
TSPAN9-202ENST00000407263 IPO5O00410 1097 aaKnown RBP11.66□□□□□ -0.54
TSPAN9-202ENST00000407263 CHMP2AO43633 222 aa11.66□□□□□ -0.54
TSPAN9-202ENST00000407263 PDIA4P13667 645 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms