RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 PVALEFA0A1B0GWK0 134 aa28.65■■■□□ 2.18
CPNE1-205ENST00000401607 GOLGA6L6A8MZA4 724 aa28.65■■■□□ 2.18
CPNE1-205ENST00000401607 PEX10O60683 326 aa28.65■■■□□ 2.18
CPNE1-205ENST00000401607 GJA5P36382 358 aa28.65■■■□□ 2.18
CPNE1-205ENST00000401607 HSP90AA4PQ58FG1 418 aa28.65■■■□□ 2.18
CPNE1-205ENST00000401607 ARHGEF16Q5VV41 709 aa28.65■■■□□ 2.18
CPNE1-205ENST00000401607 NELFBQ8WX92 580 aa28.65■■■□□ 2.18
CPNE1-205ENST00000401607 RIT2Q99578 217 aa28.65■■■□□ 2.18
CPNE1-205ENST00000401607 TEKT3Q9BXF9 490 aa28.65■■■□□ 2.18
CPNE1-205ENST00000401607 UNC45AQ9H3U1 944 aa28.65■■■□□ 2.18
CPNE1-205ENST00000401607 CYP39A1Q9NYL5 469 aa28.65■■■□□ 2.18
CPNE1-205ENST00000401607 AGTPBP1Q9UPW5 1226 aa28.65■■■□□ 2.18
CPNE1-205ENST00000401607 CHMP2AO43633 222 aa28.64■■■□□ 2.18
CPNE1-205ENST00000401607 MB21D1Q8N884 522 aa28.64■■■□□ 2.18
CPNE1-205ENST00000401607 DNAJC19Q96DA6 116 aa28.64■■■□□ 2.18
CPNE1-205ENST00000401607 HSD17B14Q9BPX1 270 aa28.64■■■□□ 2.18
CPNE1-205ENST00000401607 MAF1Q9H063 256 aa28.64■■■□□ 2.18
CPNE1-205ENST00000401607 NRBP1Q9UHY1 535 aa28.64■■■□□ 2.18
CPNE1-205ENST00000401607 FCER1AP12319 257 aa28.63■■■□□ 2.17
CPNE1-205ENST00000401607 MYCLP12524 364 aaPredicted RBP28.63■■■□□ 2.17
CPNE1-205ENST00000401607 SLC12A3P55017 1021 aa28.63■■■□□ 2.17
CPNE1-205ENST00000401607 PSMC6P62333 389 aa28.63■■■□□ 2.17
CPNE1-205ENST00000401607 CYP4A11Q02928 519 aa28.63■■■□□ 2.17
CPNE1-205ENST00000401607 STK4Q13043 487 aa28.63■■■□□ 2.17
CPNE1-205ENST00000401607 ASCC2Q9H1I8 757 aaPredicted RBP28.63■■■□□ 2.17
CPNE1-205ENST00000401607 AGO4Q9HCK5 861 aaKnown RBP28.63■■■□□ 2.17
CPNE1-205ENST00000401607 RGL1Q9NZL6 768 aa28.63■■■□□ 2.17
CPNE1-205ENST00000401607 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.63■■■□□ 2.172e-10■□□□□ 8.4
CPNE1-205ENST00000401607 COBLO75128 1261 aa28.62■■■□□ 2.17
CPNE1-205ENST00000401607 IRX3P78415 501 aaPredicted RBP28.62■■■□□ 2.17
CPNE1-205ENST00000401607 CHST13Q8NET6 341 aa28.62■■■□□ 2.17
CPNE1-205ENST00000401607 ZNF408Q9H9D4 720 aa28.62■■■□□ 2.17
CPNE1-205ENST00000401607 ZKSCAN5Q9Y2L8 839 aa28.62■■■□□ 2.17
CPNE1-205ENST00000401607 DHX15O43143 795 aaKnown RBP28.62■■■□□ 2.17
CPNE1-205ENST00000401607 SERPINC1P01008 464 aa28.62■■■□□ 2.17
CPNE1-205ENST00000401607 SSBP05455 408 aaKnown RBP eCLIP28.62■■■□□ 2.17
CPNE1-205ENST00000401607 EHHADHQ08426 723 aa28.62■■■□□ 2.17
CPNE1-205ENST00000401607 CCDC144BQ3MJ40 725 aa28.62■■■□□ 2.17
CPNE1-205ENST00000401607 CDKAL1Q5VV42 579 aa28.62■■■□□ 2.17
CPNE1-205ENST00000401607 KIAA0895Q8NCT3 520 aa28.62■■■□□ 2.17
CPNE1-205ENST00000401607 HPS3Q969F9 1004 aa28.62■■■□□ 2.17
CPNE1-205ENST00000401607 RRAGCQ9HB90 399 aa28.62■■■□□ 2.17
CPNE1-205ENST00000401607 TUFT1Q9NNX1 390 aa28.62■■■□□ 2.17
CPNE1-205ENST00000401607 LCTP09848 1927 aa28.62■■■□□ 2.17
CPNE1-205ENST00000401607 CYP11B2P19099 503 aa28.61■■■□□ 2.17
CPNE1-205ENST00000401607 ITGB3BPQ13352 177 aaPredicted RBP28.61■■■□□ 2.17
CPNE1-205ENST00000401607 MTMR1Q13613 665 aa28.61■■■□□ 2.17
CPNE1-205ENST00000401607 XRRA1Q6P2D8 792 aa28.61■■■□□ 2.17
CPNE1-205ENST00000401607 RIOX2Q8IUF8 465 aa28.61■■■□□ 2.17
CPNE1-205ENST00000401607 DYDC2Q96IM9 177 aa28.61■■■□□ 2.17
CPNE1-205ENST00000401607 ZNF830Q96NB3 372 aaPredicted RBP28.61■■■□□ 2.17
CPNE1-205ENST00000401607 GTPBP4Q9BZE4 634 aaKnown RBP28.61■■■□□ 2.17
CPNE1-205ENST00000401607 PKD2L1Q9P0L9 805 aa28.61■■■□□ 2.17
CPNE1-205ENST00000401607 DNM3Q9UQ16 869 aa28.61■■■□□ 2.17
CPNE1-205ENST00000401607 SLITRK3O94933 977 aa28.6■■■□□ 2.17
CPNE1-205ENST00000401607 UBASH3AP57075 661 aa28.6■■■□□ 2.17
CPNE1-205ENST00000401607 HERVK_113P62684 666 aa28.6■■■□□ 2.17
CPNE1-205ENST00000401607 COBLL1Q53SF7 1204 aa28.6■■■□□ 2.17
CPNE1-205ENST00000401607 GPAT2Q6NUI2 795 aa28.6■■■□□ 2.17
CPNE1-205ENST00000401607 CCDC186Q7Z3E2 898 aa28.6■■■□□ 2.17
CPNE1-205ENST00000401607 GPBP1Q86WP2 473 aa28.6■■■□□ 2.17
CPNE1-205ENST00000401607 NAP1L5Q96NT1 182 aaPredicted RBP28.6■■■□□ 2.17
CPNE1-205ENST00000401607 CNMDO75829 334 aa28.6■■■□□ 2.17
CPNE1-205ENST00000401607 NR3C2P08235 984 aa28.6■■■□□ 2.17
CPNE1-205ENST00000401607 PTGS1P23219 599 aa28.6■■■□□ 2.17
CPNE1-205ENST00000401607 CCND2P30279 289 aa28.6■■■□□ 2.17
CPNE1-205ENST00000401607 STIM1Q13586 685 aa28.6■■■□□ 2.17
CPNE1-205ENST00000401607 CTTNQ14247 550 aaKnown RBP28.6■■■□□ 2.17
CPNE1-205ENST00000401607 EPHA7Q15375 998 aa28.6■■■□□ 2.17
CPNE1-205ENST00000401607 FASTKD5Q7L8L6 764 aaKnown RBP28.6■■■□□ 2.17
CPNE1-205ENST00000401607 VSIG10LQ86VR7 867 aa28.6■■■□□ 2.17
CPNE1-205ENST00000401607 KCTD17Q8N5Z5 321 aa28.6■■■□□ 2.17
CPNE1-205ENST00000401607 SYT2Q8N9I0 419 aaPredicted RBP28.6■■■□□ 2.17
CPNE1-205ENST00000401607 RRAGDQ9NQL2 400 aaPredicted RBP28.6■■■□□ 2.17
CPNE1-205ENST00000401607 UNCXA6NJT0 531 aa28.59■■■□□ 2.17
CPNE1-205ENST00000401607 TPM3P06753 285 aa28.59■■■□□ 2.17
CPNE1-205ENST00000401607 IDEP14735 1019 aa28.59■■■□□ 2.17
CPNE1-205ENST00000401607 PMS1P54277 932 aaKnown RBP28.59■■■□□ 2.17
CPNE1-205ENST00000401607 PABPC4Q13310 644 aaKnown RBP eCLIP28.59■■■□□ 2.177e-7■■■□□ 14.8
CPNE1-205ENST00000401607 ARSHQ5FYA8 562 aa28.59■■■□□ 2.17
CPNE1-205ENST00000401607 NSUN6Q8TEA1 469 aaKnown RBP28.59■■■□□ 2.17
CPNE1-205ENST00000401607 SLC10A4Q96EP9 437 aa28.59■■■□□ 2.17
CPNE1-205ENST00000401607 SPATC1LQ9H0A9 340 aa28.59■■■□□ 2.17
CPNE1-205ENST00000401607 TRIM49BA6NDI0 452 aa28.58■■■□□ 2.17
CPNE1-205ENST00000401607 DDX39AO00148 427 aaKnown RBP28.58■■■□□ 2.17
CPNE1-205ENST00000401607 CBFA2T2O43439 604 aa28.58■■■□□ 2.17
CPNE1-205ENST00000401607 CDK11BP21127 795 aaKnown RBP28.58■■■□□ 2.17
CPNE1-205ENST00000401607 DHTKD1Q96HY7 919 aaPredicted RBP28.58■■■□□ 2.17
CPNE1-205ENST00000401607 KCNF1Q9H3M0 494 aa28.58■■■□□ 2.17
CPNE1-205ENST00000401607 SLC39A2Q9NP94 309 aa28.58■■■□□ 2.17
CPNE1-205ENST00000401607 BMP2KQ9NSY1 1161 aaPredicted RBP28.58■■■□□ 2.17
CPNE1-205ENST00000401607 INTS13Q9NVM9 706 aa28.58■■■□□ 2.17
CPNE1-205ENST00000401607 NPHP3-ACAD11A0A0J9YXS1 232 aa28.57■■■□□ 2.16
CPNE1-205ENST00000401607 PSMA7O14818 248 aa28.57■■■□□ 2.16
CPNE1-205ENST00000401607 COASYQ13057 564 aa28.57■■■□□ 2.16
CPNE1-205ENST00000401607 APTXQ7Z2E3 356 aaKnown RBP28.57■■■□□ 2.16
CPNE1-205ENST00000401607 FAM43AQ8N2R8 423 aa28.57■■■□□ 2.16
CPNE1-205ENST00000401607 EYA4O95677 639 aa28.57■■■□□ 2.16
CPNE1-205ENST00000401607 PPP1R2P41236 205 aa28.57■■■□□ 2.16
CPNE1-205ENST00000401607 SNAPC2Q13487 334 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms