RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 PBX4Q9BYU1 374 aa18.19■□□□□ 0.5
ATG4B-203ENST00000400772 SCN5AQ14524 2016 aa18.18■□□□□ 0.5
ATG4B-203ENST00000400772 CCDC196A0A1B0GTZ2 297 aa18.18■□□□□ 0.5
ATG4B-203ENST00000400772 hCG_1984214I3L0E3 225 aa18.18■□□□□ 0.5
ATG4B-203ENST00000400772 KCNA2P16389 499 aa18.18■□□□□ 0.5
ATG4B-203ENST00000400772 DNAJB2P25686 324 aa18.18■□□□□ 0.5
ATG4B-203ENST00000400772 CLK2P49760 499 aaKnown RBP18.18■□□□□ 0.5
ATG4B-203ENST00000400772 TOB2Q14106 344 aaPredicted RBP18.18■□□□□ 0.5
ATG4B-203ENST00000400772 NTRK3Q16288 839 aa18.18■□□□□ 0.5
ATG4B-203ENST00000400772 PKN1Q16512 942 aa18.18■□□□□ 0.5
ATG4B-203ENST00000400772 PFKFB3Q16875 520 aaPredicted RBP18.18■□□□□ 0.5
ATG4B-203ENST00000400772 ZNF713Q8N859 430 aaPredicted RBP18.18■□□□□ 0.5
ATG4B-203ENST00000400772 RETREG2Q8NC44 543 aa18.18■□□□□ 0.5
ATG4B-203ENST00000400772 CAGE1Q8TC20 777 aa18.18■□□□□ 0.5
ATG4B-203ENST00000400772 WNT8BQ93098 351 aa18.18■□□□□ 0.5
ATG4B-203ENST00000400772 PGBD1Q96JS3 809 aa18.18■□□□□ 0.5
ATG4B-203ENST00000400772 JADE2Q9NQC1 790 aa18.18■□□□□ 0.5
ATG4B-203ENST00000400772 TRIP12Q14669 1992 aaPredicted RBP18.18■□□□□ 0.5
ATG4B-203ENST00000400772 DOCK5Q9H7D0 1870 aa18.18■□□□□ 0.5
ATG4B-203ENST00000400772 H3BRB1 525 aa18.17■□□□□ 0.5
ATG4B-203ENST00000400772 RBAK-RBAKDNI3L0D1 243 aa18.17■□□□□ 0.5
ATG4B-203ENST00000400772 NOP56O00567 594 aaKnown RBP18.17■□□□□ 0.5
ATG4B-203ENST00000400772 ADAMTS3O15072 1205 aa18.17■□□□□ 0.5
ATG4B-203ENST00000400772 PRPF3O43395 683 aaKnown RBP18.17■□□□□ 0.5
ATG4B-203ENST00000400772 PFKMP08237 780 aa18.17■□□□□ 0.5
ATG4B-203ENST00000400772 PDIA3P30101 505 aaKnown RBP18.17■□□□□ 0.5
ATG4B-203ENST00000400772 HOXC8P31273 242 aa18.17■□□□□ 0.5
ATG4B-203ENST00000400772 RFC2P35250 354 aa18.17■□□□□ 0.5
ATG4B-203ENST00000400772 ADCY7P51828 1080 aa18.17■□□□□ 0.5
ATG4B-203ENST00000400772 RBL2Q08999 1139 aa18.17■□□□□ 0.5
ATG4B-203ENST00000400772 TRIM71Q2Q1W2 868 aaKnown RBP18.17■□□□□ 0.5
ATG4B-203ENST00000400772 TEX2Q8IWB9 1127 aa18.17■□□□□ 0.5
ATG4B-203ENST00000400772 CYP2W1Q8TAV3 490 aa18.17■□□□□ 0.5
ATG4B-203ENST00000400772 CDX2Q99626 313 aaPredicted RBP18.17■□□□□ 0.5
ATG4B-203ENST00000400772 TUT1Q9H6E5 874 aaKnown RBP18.17■□□□□ 0.5
ATG4B-203ENST00000400772 TMEM260Q9NX78 707 aa18.17■□□□□ 0.5
ATG4B-203ENST00000400772 TMEM265A0A087WTH1 108 aa18.16■□□□□ 0.5
ATG4B-203ENST00000400772 CKBP12277 381 aa18.16■□□□□ 0.5
ATG4B-203ENST00000400772 SCG2P13521 617 aa18.16■□□□□ 0.5
ATG4B-203ENST00000400772 PTK7Q13308 1070 aa18.16■□□□□ 0.5
ATG4B-203ENST00000400772 TRAF7Q6Q0C0 670 aa18.16■□□□□ 0.5
ATG4B-203ENST00000400772 AFAP1L1Q8TED9 768 aa18.16■□□□□ 0.5
ATG4B-203ENST00000400772 CDHR1Q96JP9 859 aa18.16■□□□□ 0.5
ATG4B-203ENST00000400772 MXRA8Q9BRK3 442 aa18.16■□□□□ 0.5
ATG4B-203ENST00000400772 TM6SF1Q9BZW5 370 aa18.16■□□□□ 0.5
ATG4B-203ENST00000400772 MTIF3Q9H2K0 278 aaKnown RBP18.16■□□□□ 0.5
ATG4B-203ENST00000400772 GSTTP1A0A1W2PQM5 241 aa18.15■□□□□ 0.5
ATG4B-203ENST00000400772 MAFGO15525 162 aa18.15■□□□□ 0.5
ATG4B-203ENST00000400772 PPFIA3O75145 1194 aa18.15■□□□□ 0.5
ATG4B-203ENST00000400772 FOSP01100 380 aaPredicted RBP18.15■□□□□ 0.5
ATG4B-203ENST00000400772 SMIM10L2AP0DMW4 78 aa18.15■□□□□ 0.5
ATG4B-203ENST00000400772 SMIM10L2BP0DMW5 78 aa18.15■□□□□ 0.5
ATG4B-203ENST00000400772 SELPP16109 830 aa18.15■□□□□ 0.5
ATG4B-203ENST00000400772 CCT2P78371 535 aaKnown RBP18.15■□□□□ 0.5
ATG4B-203ENST00000400772 SP4Q02446 784 aa18.15■□□□□ 0.5
ATG4B-203ENST00000400772 MTMR1Q13613 665 aa18.15■□□□□ 0.5
ATG4B-203ENST00000400772 TRIM50Q86XT4 487 aa18.15■□□□□ 0.5
ATG4B-203ENST00000400772 CCDC155Q8N6L0 562 aa18.15■□□□□ 0.5
ATG4B-203ENST00000400772 GIMAP8Q8ND71 665 aaPredicted RBP18.15■□□□□ 0.5
ATG4B-203ENST00000400772 TET1Q8NFU7 2136 aa18.15■□□□□ 0.5
ATG4B-203ENST00000400772 PHKBQ93100 1093 aa18.15■□□□□ 0.5
ATG4B-203ENST00000400772 TIFAQ96CG3 184 aa18.15■□□□□ 0.5
ATG4B-203ENST00000400772 ANO3Q9BYT9 981 aa18.15■□□□□ 0.5
ATG4B-203ENST00000400772 RNPEPQ9H4A4 650 aa18.15■□□□□ 0.5
ATG4B-203ENST00000400772 CYP46A1Q9Y6A2 500 aa18.15■□□□□ 0.5
ATG4B-203ENST00000400772 GRIN2CQ14957 1233 aa18.14■□□□□ 0.49
ATG4B-203ENST00000400772 UTP14CQ5TAP6 766 aaKnown RBP18.14■□□□□ 0.49
ATG4B-203ENST00000400772 LRRC8DQ7L1W4 858 aa18.14■□□□□ 0.49
ATG4B-203ENST00000400772 SERINC5Q86VE9 423 aa18.14■□□□□ 0.49
ATG4B-203ENST00000400772 LARP6Q9BRS8 491 aaKnown RBP18.14■□□□□ 0.49
ATG4B-203ENST00000400772 UPF3BQ9BZI7 483 aaKnown RBP18.14■□□□□ 0.49
ATG4B-203ENST00000400772 ZMYND12Q9H0C1 365 aa18.14■□□□□ 0.49
ATG4B-203ENST00000400772 GLT8D2Q9H1C3 349 aa18.14■□□□□ 0.49
ATG4B-203ENST00000400772 ZNF576Q9H609 170 aa18.14■□□□□ 0.49
ATG4B-203ENST00000400772 EHMT1Q9H9B1 1298 aa18.14■□□□□ 0.49
ATG4B-203ENST00000400772 NCOA5Q9HCD5 579 aaKnown RBP18.14■□□□□ 0.49
ATG4B-203ENST00000400772 KCNH7Q9NS40 1196 aa18.14■□□□□ 0.49
ATG4B-203ENST00000400772 PKD2L1Q9P0L9 805 aa18.14■□□□□ 0.49
ATG4B-203ENST00000400772 YBX2Q9Y2T7 364 aaKnown RBP18.14■□□□□ 0.49
ATG4B-203ENST00000400772 SLC4A7Q9Y6M7 1214 aa18.14■□□□□ 0.49
ATG4B-203ENST00000400772 TANC1Q9C0D5 1861 aa18.14■□□□□ 0.49
ATG4B-203ENST00000400772 ESYT2A0FGR8 921 aa18.13■□□□□ 0.49
ATG4B-203ENST00000400772 C17orf102A2RUQ5 167 aa18.13■□□□□ 0.49
ATG4B-203ENST00000400772 ZBBXA8MT70 800 aa18.13■□□□□ 0.49
ATG4B-203ENST00000400772 NBNO60934 754 aa18.13■□□□□ 0.49
ATG4B-203ENST00000400772 ARP10275 920 aa18.13■□□□□ 0.49
ATG4B-203ENST00000400772 IFNAR1P17181 557 aa18.13■□□□□ 0.49
ATG4B-203ENST00000400772 SREBF1P36956 1147 aa18.13■□□□□ 0.49
ATG4B-203ENST00000400772 RABGGTBP53611 331 aa18.13■□□□□ 0.49
ATG4B-203ENST00000400772 AP3B2Q13367 1082 aa18.13■□□□□ 0.49
ATG4B-203ENST00000400772 ZNF618Q5T7W0 954 aa18.13■□□□□ 0.49
ATG4B-203ENST00000400772 JAKMIP3Q5VZ66 844 aa18.13■□□□□ 0.49
ATG4B-203ENST00000400772 CRYGNQ8WXF5 182 aa18.13■□□□□ 0.49
ATG4B-203ENST00000400772 MYLIPQ8WY64 445 aa18.13■□□□□ 0.49
ATG4B-203ENST00000400772 SEPT1Q8WYJ6 367 aa18.13■□□□□ 0.49
ATG4B-203ENST00000400772 FTOQ9C0B1 505 aaKnown RBP eCLIP18.13■□□□□ 0.49
ATG4B-203ENST00000400772 MEIS1O00470 390 aa18.12■□□□□ 0.49
ATG4B-203ENST00000400772 TREHO43280 583 aa18.12■□□□□ 0.49
ATG4B-203ENST00000400772 CXCL10P02778 98 aa18.12■□□□□ 0.49
ATG4B-203ENST00000400772 CENPBP07199 599 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms