RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 CCND2P30279 289 aa13.83□□□□□ -0.2
LINC00544-201ENST00000400540 HOXC8P31273 242 aa13.83□□□□□ -0.2
LINC00544-201ENST00000400540 GRM4Q14833 912 aa13.83□□□□□ -0.2
LINC00544-201ENST00000400540 KCNV1Q6PIU1 500 aa13.83□□□□□ -0.2
LINC00544-201ENST00000400540 FBXO22Q8NEZ5 403 aa13.83□□□□□ -0.2
LINC00544-201ENST00000400540 ATP6V0A1Q93050 837 aa13.83□□□□□ -0.2
LINC00544-201ENST00000400540 MLXIPQ9HAP2 919 aa13.83□□□□□ -0.2
LINC00544-201ENST00000400540 MAP3K20Q9NYL2 800 aaKnown RBP13.83□□□□□ -0.2
LINC00544-201ENST00000400540 TAF6LQ9Y6J9 622 aa13.83□□□□□ -0.2
LINC00544-201ENST00000400540 EMSYQ7Z589 1322 aa13.83□□□□□ -0.2
LINC00544-201ENST00000400540 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.82□□□□□ -0.2
LINC00544-201ENST00000400540 H3BRB1 525 aa13.82□□□□□ -0.2
LINC00544-201ENST00000400540 GCOM1H8Y6P7 765 aaPredicted RBP13.82□□□□□ -0.2
LINC00544-201ENST00000400540 AMHP03971 560 aa13.82□□□□□ -0.2
LINC00544-201ENST00000400540 POLR2MP0CAP2 368 aa13.82□□□□□ -0.2
LINC00544-201ENST00000400540 GSPT1P15170 499 aaKnown RBP13.82□□□□□ -0.2
LINC00544-201ENST00000400540 MRPS9P82933 396 aaKnown RBP13.82□□□□□ -0.2
LINC00544-201ENST00000400540 HTRA4P83105 476 aaPredicted RBP13.82□□□□□ -0.2
LINC00544-201ENST00000400540 SEMA3FQ13275 785 aa13.82□□□□□ -0.2
LINC00544-201ENST00000400540 PLEKHG4Q58EX7 1191 aa13.82□□□□□ -0.2
LINC00544-201ENST00000400540 TRIM50Q86XT4 487 aa13.82□□□□□ -0.2
LINC00544-201ENST00000400540 EXOC6Q8TAG9 804 aa13.82□□□□□ -0.2
LINC00544-201ENST00000400540 SP7Q8TDD2 431 aaPredicted RBP13.82□□□□□ -0.2
LINC00544-201ENST00000400540 TUT1Q9H6E5 874 aaKnown RBP13.82□□□□□ -0.2
LINC00544-201ENST00000400540 RIOX1Q9H6W3 641 aa13.82□□□□□ -0.2
LINC00544-201ENST00000400540 INSL6Q9Y581 213 aa13.82□□□□□ -0.2
LINC00544-201ENST00000400540 FRMPD4Q14CM0 1322 aa13.82□□□□□ -0.2
LINC00544-201ENST00000400540 CYP21A2P08686 494 aa13.81□□□□□ -0.2
LINC00544-201ENST00000400540 IL9P15248 144 aa13.81□□□□□ -0.2
LINC00544-201ENST00000400540 KCNA5P22460 613 aa13.81□□□□□ -0.2
LINC00544-201ENST00000400540 TMEM31Q5JXX7 168 aa13.81□□□□□ -0.2
LINC00544-201ENST00000400540 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.81□□□□□ -0.2
LINC00544-201ENST00000400540 PIBF1Q8WXW3 757 aa13.81□□□□□ -0.2
LINC00544-201ENST00000400540 RNPEPQ9H4A4 650 aa13.81□□□□□ -0.2
LINC00544-201ENST00000400540 SUPT16HQ9Y5B9 1047 aaKnown RBP13.81□□□□□ -0.2
LINC00544-201ENST00000400540 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.8□□□□□ -0.2
LINC00544-201ENST00000400540 IFIT3O14879 490 aaKnown RBP13.8□□□□□ -0.2
LINC00544-201ENST00000400540 UPP2O95045 317 aa13.8□□□□□ -0.2
LINC00544-201ENST00000400540 TGFB3P10600 412 aa13.8□□□□□ -0.2
LINC00544-201ENST00000400540 PDE4AP27815 886 aa13.8□□□□□ -0.2
LINC00544-201ENST00000400540 PTH1RQ03431 593 aa13.8□□□□□ -0.2
LINC00544-201ENST00000400540 TROAPQ12815 778 aa13.8□□□□□ -0.2
LINC00544-201ENST00000400540 AAMPQ13685 434 aa13.8□□□□□ -0.2
LINC00544-201ENST00000400540 LEXMQ3ZCV2 418 aa13.8□□□□□ -0.2
LINC00544-201ENST00000400540 EPC2Q52LR7 807 aa13.8□□□□□ -0.2
LINC00544-201ENST00000400540 CYFIP1Q7L576 1253 aa13.8□□□□□ -0.2
LINC00544-201ENST00000400540 SAMD3Q8N6K7 520 aa13.8□□□□□ -0.2
LINC00544-201ENST00000400540 GPR20Q99678 358 aa13.8□□□□□ -0.2
LINC00544-201ENST00000400540 SETD4Q9NVD3 440 aa13.8□□□□□ -0.2
LINC00544-201ENST00000400540 RTEL1Q9NZ71 1219 aa13.8□□□□□ -0.2
LINC00544-201ENST00000400540 MYO7AQ13402 2215 aa13.79□□□□□ -0.2
LINC00544-201ENST00000400540 PLXNA4Q9HCM2 1894 aa13.79□□□□□ -0.2
LINC00544-201ENST00000400540 PNMA6FA0A0J9YX94 578 aa13.79□□□□□ -0.2
LINC00544-201ENST00000400540 NOP56O00567 594 aaKnown RBP13.79□□□□□ -0.2
LINC00544-201ENST00000400540 SP4Q02446 784 aa13.79□□□□□ -0.2
LINC00544-201ENST00000400540 SEPT8Q92599 483 aa13.79□□□□□ -0.2
LINC00544-201ENST00000400540 TOP1MTQ969P6 601 aa13.79□□□□□ -0.2
LINC00544-201ENST00000400540 MRPL38Q96DV4 380 aaKnown RBP13.79□□□□□ -0.2
LINC00544-201ENST00000400540 INPP4AQ96PE3 977 aaPredicted RBP13.79□□□□□ -0.2
LINC00544-201ENST00000400540 YME1L1Q96TA2 773 aa13.79□□□□□ -0.2
LINC00544-201ENST00000400540 HCN4Q9Y3Q4 1203 aa13.79□□□□□ -0.2
LINC00544-201ENST00000400540 SPATA31C2B4DYI2 1134 aa13.78□□□□□ -0.2
LINC00544-201ENST00000400540 PI4K2BG5E9Z4 385 aa13.78□□□□□ -0.2
LINC00544-201ENST00000400540 H3BQ06 376 aaPredicted RBP13.78□□□□□ -0.2
LINC00544-201ENST00000400540 GPR37L1O60883 481 aa13.78□□□□□ -0.2
LINC00544-201ENST00000400540 ICAM3P32942 547 aa13.78□□□□□ -0.2
LINC00544-201ENST00000400540 ANTXR2P58335 489 aa13.78□□□□□ -0.2
LINC00544-201ENST00000400540 TRDNQ13061 729 aa13.78□□□□□ -0.2
LINC00544-201ENST00000400540 WTAPQ15007 396 aa13.78□□□□□ -0.2
LINC00544-201ENST00000400540 GNPTABQ3T906 1256 aa13.78□□□□□ -0.2
LINC00544-201ENST00000400540 TTC22Q5TAA0 569 aa13.78□□□□□ -0.2
LINC00544-201ENST00000400540 UTP14CQ5TAP6 766 aaKnown RBP13.78□□□□□ -0.2
LINC00544-201ENST00000400540 PTCRAQ6ISU1 281 aaPredicted RBP13.78□□□□□ -0.2
LINC00544-201ENST00000400540 METTL7BQ6UX53 244 aa13.78□□□□□ -0.2
LINC00544-201ENST00000400540 FAM178BQ8IXR5 827 aa13.78□□□□□ -0.2
LINC00544-201ENST00000400540 LMBR1Q8WVP7 490 aa13.78□□□□□ -0.2
LINC00544-201ENST00000400540 MYL10Q9BUA6 226 aa13.78□□□□□ -0.2
LINC00544-201ENST00000400540 E7EWF7 191 aa13.77□□□□□ -0.21
LINC00544-201ENST00000400540 H3BNC9 293 aa13.77□□□□□ -0.21
LINC00544-201ENST00000400540 FIBPO43427 364 aa13.77□□□□□ -0.21
LINC00544-201ENST00000400540 HOXD11P31277 338 aaPredicted RBP13.77□□□□□ -0.21
LINC00544-201ENST00000400540 TTC3P53804 2025 aa13.77□□□□□ -0.21
LINC00544-201ENST00000400540 ADAM17P78536 824 aa13.77□□□□□ -0.21
LINC00544-201ENST00000400540 ARHGAP4P98171 946 aa13.77□□□□□ -0.21
LINC00544-201ENST00000400540 GPM6BQ13491 265 aa13.77□□□□□ -0.21
LINC00544-201ENST00000400540 NEDD9Q14511 834 aa13.77□□□□□ -0.21
LINC00544-201ENST00000400540 TCEAL5Q5H9L2 206 aa13.77□□□□□ -0.21
LINC00544-201ENST00000400540 USP17L6PQ6QN14 398 aa13.77□□□□□ -0.21
LINC00544-201ENST00000400540 RUFY4Q6ZNE9 571 aa13.77□□□□□ -0.21
LINC00544-201ENST00000400540 TMEM192Q8IY95 271 aa13.77□□□□□ -0.21
LINC00544-201ENST00000400540 GJD3Q8N144 294 aa13.77□□□□□ -0.21
LINC00544-201ENST00000400540 NEK9Q8TD19 979 aa13.77□□□□□ -0.21
LINC00544-201ENST00000400540 YTHDC1Q96MU7 727 aaKnown RBP13.77□□□□□ -0.21
LINC00544-201ENST00000400540 USP26Q9BXU7 913 aa13.77□□□□□ -0.21
LINC00544-201ENST00000400540 IFIH1Q9BYX4 1025 aaKnown RBP13.77□□□□□ -0.21
LINC00544-201ENST00000400540 ERICH2A1L162 156 aa13.76□□□□□ -0.21
LINC00544-201ENST00000400540 GRXCR2A6NFK2 248 aa13.76□□□□□ -0.21
LINC00544-201ENST00000400540 CAND2O75155 1236 aa13.76□□□□□ -0.21
LINC00544-201ENST00000400540 SSTR3P32745 418 aaPredicted RBP13.76□□□□□ -0.21
LINC00544-201ENST00000400540 TRAF1Q13077 416 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms