RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 PUS7LQ9H0K6 701 aaKnown RBP11.88□□□□□ -0.51
MSL3-207ENST00000398527 NCOA5Q9HCD5 579 aaKnown RBP11.88□□□□□ -0.51
MSL3-207ENST00000398527 DNAAF2Q9NVR5 837 aaKnown RBP11.88□□□□□ -0.51
MSL3-207ENST00000398527 DDX56Q9NY93 547 aaKnown RBP11.88□□□□□ -0.51
MSL3-207ENST00000398527 COL4A5P29400 1685 aa11.88□□□□□ -0.51
MSL3-207ENST00000398527 GOLGA8BA8MQT2 603 aa11.87□□□□□ -0.51
MSL3-207ENST00000398527 SH2B2O14492 632 aaPredicted RBP11.87□□□□□ -0.51
MSL3-207ENST00000398527 CEP104O60308 925 aa11.87□□□□□ -0.51
MSL3-207ENST00000398527 LIFRP42702 1097 aa11.87□□□□□ -0.51
MSL3-207ENST00000398527 ME1P48163 572 aa11.87□□□□□ -0.51
MSL3-207ENST00000398527 HSD17B7P56937 341 aa11.87□□□□□ -0.51
MSL3-207ENST00000398527 GSDMDP57764 484 aa11.87□□□□□ -0.51
MSL3-207ENST00000398527 NCBP1Q09161 790 aaKnown RBP11.87□□□□□ -0.51
MSL3-207ENST00000398527 PABPC4Q13310 644 aaKnown RBP eCLIP11.87□□□□□ -0.51
MSL3-207ENST00000398527 ZRSR1Q15695 479 aaKnown RBP11.87□□□□□ -0.51
MSL3-207ENST00000398527 SUSD4Q5VX71 490 aa11.87□□□□□ -0.51
MSL3-207ENST00000398527 DHX40Q8IX18 779 aaKnown RBP11.87□□□□□ -0.51
MSL3-207ENST00000398527 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.87□□□□□ -0.51
MSL3-207ENST00000398527 GIMAP8Q8ND71 665 aaPredicted RBP11.87□□□□□ -0.51
MSL3-207ENST00000398527 LPIN2Q92539 896 aa11.87□□□□□ -0.51
MSL3-207ENST00000398527 RABGGTAQ92696 567 aa11.87□□□□□ -0.51
MSL3-207ENST00000398527 SPAG5Q96R06 1193 aa11.87□□□□□ -0.51
MSL3-207ENST00000398527 TANGO6Q9C0B7 1094 aa11.87□□□□□ -0.51
MSL3-207ENST00000398527 KCTD5Q9NXV2 234 aa11.87□□□□□ -0.51
MSL3-207ENST00000398527 TRPC6Q9Y210 931 aa11.87□□□□□ -0.51
MSL3-207ENST00000398527 SNED1Q8TER0 1413 aa11.87□□□□□ -0.51
MSL3-207ENST00000398527 ECM29Q5VYK3 1845 aa11.87□□□□□ -0.51
MSL3-207ENST00000398527 TCRBV5S4A2TA0A5A2 114 aa11.87□□□□□ -0.51
MSL3-207ENST00000398527 SART1O43290 800 aaKnown RBP11.87□□□□□ -0.51
MSL3-207ENST00000398527 KDM1AO60341 852 aa11.87□□□□□ -0.51
MSL3-207ENST00000398527 DTNBO60941 627 aa11.87□□□□□ -0.51
MSL3-207ENST00000398527 PSMA3P25788 255 aa11.87□□□□□ -0.51
MSL3-207ENST00000398527 KIF23Q02241 960 aaPredicted RBP11.87□□□□□ -0.51
MSL3-207ENST00000398527 PUM3Q15397 648 aaKnown RBP11.87□□□□□ -0.51
MSL3-207ENST00000398527 SLFNL1Q499Z3 407 aa11.87□□□□□ -0.51
MSL3-207ENST00000398527 KAZNQ674X7 775 aa11.87□□□□□ -0.51
MSL3-207ENST00000398527 ARHGAP22Q7Z5H3 698 aa11.87□□□□□ -0.51
MSL3-207ENST00000398527 TMCO5AQ8N6Q1 288 aa11.87□□□□□ -0.51
MSL3-207ENST00000398527 GIPC2Q8TF65 315 aa11.87□□□□□ -0.51
MSL3-207ENST00000398527 SYNCQ9H7C4 482 aa11.87□□□□□ -0.51
MSL3-207ENST00000398527 CROTQ9UKG9 612 aa11.87□□□□□ -0.51
MSL3-207ENST00000398527 TTF2Q9UNY4 1162 aaKnown RBP11.87□□□□□ -0.51
MSL3-207ENST00000398527 NEDD4P46934 1319 aa11.86□□□□□ -0.51
MSL3-207ENST00000398527 IFRD1O00458 451 aaPredicted RBP11.86□□□□□ -0.51
MSL3-207ENST00000398527 CPLX1O14810 134 aa11.86□□□□□ -0.51
MSL3-207ENST00000398527 TUBB4AP04350 444 aa11.86□□□□□ -0.51
MSL3-207ENST00000398527 FXR1P51114 621 aaKnown RBP eCLIP11.86□□□□□ -0.51
MSL3-207ENST00000398527 SCNN1BP51168 640 aa11.86□□□□□ -0.51
MSL3-207ENST00000398527 SLC39A14Q15043 492 aa11.86□□□□□ -0.51
MSL3-207ENST00000398527 STK38Q15208 465 aa11.86□□□□□ -0.51
MSL3-207ENST00000398527 C14orf80Q86SX3 495 aa11.86□□□□□ -0.51
MSL3-207ENST00000398527 WDR75Q8IWA0 830 aaKnown RBP11.86□□□□□ -0.51
MSL3-207ENST00000398527 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.86□□□□□ -0.514e-7■□□□□ 8.1
MSL3-207ENST00000398527 DNAI2Q9GZS0 605 aa11.86□□□□□ -0.51
MSL3-207ENST00000398527 VCX3BQ9H321 246 aa11.86□□□□□ -0.51
MSL3-207ENST00000398527 A0A1B0GUA9 196 aa11.86□□□□□ -0.51
MSL3-207ENST00000398527 KLRG2A4D1S0 409 aaPredicted RBP11.86□□□□□ -0.51
MSL3-207ENST00000398527 SMTNL1A8MU46 457 aa11.86□□□□□ -0.51
MSL3-207ENST00000398527 EIF3CLB5ME19 914 aaKnown RBP11.86□□□□□ -0.51
MSL3-207ENST00000398527 MRPL28Q13084 256 aaKnown RBP11.86□□□□□ -0.51
MSL3-207ENST00000398527 ANO1Q5XXA6 986 aa11.86□□□□□ -0.51
MSL3-207ENST00000398527 PDXDC2PQ6P474 469 aa11.86□□□□□ -0.51
MSL3-207ENST00000398527 C11orf57Q6ZUT1 292 aaPredicted RBP11.86□□□□□ -0.51
MSL3-207ENST00000398527 NANOGNBQ7Z5D8 188 aa11.86□□□□□ -0.51
MSL3-207ENST00000398527 RAVER1Q8IY67 606 aaKnown RBP11.86□□□□□ -0.51
MSL3-207ENST00000398527 ZNF713Q8N859 430 aaPredicted RBP11.86□□□□□ -0.51
MSL3-207ENST00000398527 GBP7Q8N8V2 638 aaPredicted RBP11.86□□□□□ -0.51
MSL3-207ENST00000398527 IPCEF1Q8WWN9 437 aaPredicted RBP11.86□□□□□ -0.51
MSL3-207ENST00000398527 EIF3CQ99613 913 aaKnown RBP11.86□□□□□ -0.51
MSL3-207ENST00000398527 CNNM2Q9H8M5 875 aa11.86□□□□□ -0.51
MSL3-207ENST00000398527 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.86□□□□□ -0.51
MSL3-207ENST00000398527 FBXL5Q9UKA1 691 aa11.86□□□□□ -0.51
MSL3-207ENST00000398527 BECN2A8MW95 431 aa11.85□□□□□ -0.51
MSL3-207ENST00000398527 RASA4BC9J798 803 aa11.85□□□□□ -0.51
MSL3-207ENST00000398527 KIF2AO00139 706 aaPredicted RBP11.85□□□□□ -0.51
MSL3-207ENST00000398527 IKBKBO14920 756 aa11.85□□□□□ -0.51
MSL3-207ENST00000398527 HALP42357 657 aa11.85□□□□□ -0.51
MSL3-207ENST00000398527 ARPC4P59998 168 aa11.85□□□□□ -0.51
MSL3-207ENST00000398527 GPS2Q13227 327 aa11.85□□□□□ -0.51
MSL3-207ENST00000398527 CCDC122Q5T0U0 273 aa11.85□□□□□ -0.51
MSL3-207ENST00000398527 RNF168Q8IYW5 571 aaPredicted RBP11.85□□□□□ -0.51
MSL3-207ENST00000398527 LINC00469Q8N7U9 141 aa11.85□□□□□ -0.51
MSL3-207ENST00000398527 SPDYE1Q8NFV5 336 aaPredicted RBP11.85□□□□□ -0.51
MSL3-207ENST00000398527 WHAMMQ8TF30 809 aa11.85□□□□□ -0.51
MSL3-207ENST00000398527 GLIS2Q9BZE0 524 aaPredicted RBP11.85□□□□□ -0.51
MSL3-207ENST00000398527 ADARB2Q9NS39 739 aaKnown RBP11.85□□□□□ -0.51
MSL3-207ENST00000398527 NOSIPQ9Y314 301 aaKnown RBP11.85□□□□□ -0.51
MSL3-207ENST00000398527 GOLGA6L10A0A0M3HER8 536 aa11.85□□□□□ -0.51
MSL3-207ENST00000398527 SPDYE3A6NKU9 549 aa11.85□□□□□ -0.51
MSL3-207ENST00000398527 PDE6AP16499 860 aa11.85□□□□□ -0.51
MSL3-207ENST00000398527 NLRP12P59046 1061 aa11.85□□□□□ -0.51
MSL3-207ENST00000398527 ZBTB17Q13105 803 aa11.85□□□□□ -0.51
MSL3-207ENST00000398527 BTG3Q14201 252 aaPredicted RBP11.85□□□□□ -0.51
MSL3-207ENST00000398527 CDCA2Q69YH5 1023 aaPredicted RBP11.85□□□□□ -0.51
MSL3-207ENST00000398527 KIAA1328Q86T90 577 aa11.85□□□□□ -0.51
MSL3-207ENST00000398527 LRRC8AQ8IWT6 810 aa11.85□□□□□ -0.51
MSL3-207ENST00000398527 WASF1Q92558 559 aa11.85□□□□□ -0.51
MSL3-207ENST00000398527 STRBPQ96SI9 672 aaKnown RBP11.85□□□□□ -0.51
MSL3-207ENST00000398527 NELL2Q99435 816 aa11.85□□□□□ -0.51
MSL3-207ENST00000398527 DMGDHQ9UI17 866 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms