RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 TRIM29Q14134 588 aa17.94■□□□□ 0.46
MBD1-207ENST00000398488 NIPA1Q7RTP0 329 aa17.94■□□□□ 0.46
MBD1-207ENST00000398488 PPTC7Q8NI37 304 aa17.94■□□□□ 0.46
MBD1-207ENST00000398488 KAT2BQ92831 832 aa17.94■□□□□ 0.46
MBD1-207ENST00000398488 MBOAT7Q96N66 472 aa17.94■□□□□ 0.46
MBD1-207ENST00000398488 MLXIPQ9HAP2 919 aa17.94■□□□□ 0.46
MBD1-207ENST00000398488 SMC3Q9UQE7 1217 aa17.94■□□□□ 0.46
MBD1-207ENST00000398488 SLC37A4O43826 429 aa17.93■□□□□ 0.46
MBD1-207ENST00000398488 HOXD8P13378 290 aaPredicted RBP17.93■□□□□ 0.46
MBD1-207ENST00000398488 NEDD9Q14511 834 aa17.93■□□□□ 0.46
MBD1-207ENST00000398488 METTL7BQ6UX53 244 aa17.93■□□□□ 0.46
MBD1-207ENST00000398488 GPR20Q99678 358 aa17.93■□□□□ 0.46
MBD1-207ENST00000398488 STARD7Q9NQZ5 370 aa17.93■□□□□ 0.46
MBD1-207ENST00000398488 CYP3A7-CYP3A51PA0A087WV96 503 aa17.93■□□□□ 0.46
MBD1-207ENST00000398488 GSTTP1A0A1W2PQM5 241 aa17.93■□□□□ 0.46
MBD1-207ENST00000398488 MSH4O15457 936 aa17.93■□□□□ 0.46
MBD1-207ENST00000398488 ZNF286BP0CG31 522 aa17.93■□□□□ 0.46
MBD1-207ENST00000398488 CYP3A7P24462 503 aa17.93■□□□□ 0.46
MBD1-207ENST00000398488 SNX17Q15036 470 aa17.93■□□□□ 0.46
MBD1-207ENST00000398488 LETM2Q2VYF4 491 aa17.93■□□□□ 0.46
MBD1-207ENST00000398488 TRIM60Q495X7 471 aa17.93■□□□□ 0.46
MBD1-207ENST00000398488 CDHR1Q96JP9 859 aa17.93■□□□□ 0.46
MBD1-207ENST00000398488 DDX39AO00148 427 aaKnown RBP17.92■□□□□ 0.46
MBD1-207ENST00000398488 MAFGO15525 162 aa17.92■□□□□ 0.46
MBD1-207ENST00000398488 CCNE2O96020 404 aa17.92■□□□□ 0.46
MBD1-207ENST00000398488 CDK7P50613 346 aa17.92■□□□□ 0.46
MBD1-207ENST00000398488 RTP1P59025 263 aa17.92■□□□□ 0.46
MBD1-207ENST00000398488 NEK8Q86SG6 692 aa17.92■□□□□ 0.46
MBD1-207ENST00000398488 GLT1D1Q96MS3 346 aa17.92■□□□□ 0.46
MBD1-207ENST00000398488 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.92■□□□□ 0.46
MBD1-207ENST00000398488 RBAK-RBAKDNI3L0D1 243 aa17.91■□□□□ 0.46
MBD1-207ENST00000398488 ZEB2O60315 1214 aa17.91■□□□□ 0.46
MBD1-207ENST00000398488 ELP1O95163 1332 aa17.91■□□□□ 0.46
MBD1-207ENST00000398488 Q4G0T1 1027 aa17.91■□□□□ 0.46
MBD1-207ENST00000398488 TRIM50Q86XT4 487 aa17.91■□□□□ 0.46
MBD1-207ENST00000398488 SLC43A3Q8NBI5 491 aa17.91■□□□□ 0.46
MBD1-207ENST00000398488 DPF3Q92784 378 aa17.91■□□□□ 0.46
MBD1-207ENST00000398488 VTI1AQ96AJ9 217 aa17.91■□□□□ 0.46
MBD1-207ENST00000398488 C16orf70Q9BSU1 422 aa17.91■□□□□ 0.46
MBD1-207ENST00000398488 MTG1Q9BT17 334 aaPredicted RBP17.91■□□□□ 0.46
MBD1-207ENST00000398488 BRMS1Q9HCU9 246 aa17.91■□□□□ 0.46
MBD1-207ENST00000398488 POLR3EQ9NVU0 708 aa17.91■□□□□ 0.46
MBD1-207ENST00000398488 ATP11BQ9Y2G3 1177 aa17.91■□□□□ 0.46
MBD1-207ENST00000398488 SCN10AQ9Y5Y9 1956 aa17.9■□□□□ 0.46
MBD1-207ENST00000398488 NFASCO94856 1347 aa17.9■□□□□ 0.46
MBD1-207ENST00000398488 IPO5O00410 1097 aaKnown RBP17.9■□□□□ 0.46
MBD1-207ENST00000398488 PPFIA4O75335 1185 aa17.9■□□□□ 0.46
MBD1-207ENST00000398488 TLE2Q04725 743 aa17.9■□□□□ 0.46
MBD1-207ENST00000398488 ITGA7Q13683 1181 aa17.9■□□□□ 0.46
MBD1-207ENST00000398488 DGKDQ16760 1214 aa17.9■□□□□ 0.46
MBD1-207ENST00000398488 NBPF20Q3BBV1 942 aa17.9■□□□□ 0.46
MBD1-207ENST00000398488 C7orf61Q8IZ16 206 aa17.9■□□□□ 0.46
MBD1-207ENST00000398488 PCYT2Q99447 389 aa17.9■□□□□ 0.46
MBD1-207ENST00000398488 ZNF577Q9BSK1 485 aa17.9■□□□□ 0.46
MBD1-207ENST00000398488 HTATIP2Q9BUP3 242 aa17.9■□□□□ 0.46
MBD1-207ENST00000398488 FOXP1Q9H334 677 aaPredicted RBP17.9■□□□□ 0.46
MBD1-207ENST00000398488 ARVCFO00192 962 aa17.89■□□□□ 0.45
MBD1-207ENST00000398488 CCNT1O60563 726 aaKnown RBP17.89■□□□□ 0.45
MBD1-207ENST00000398488 LGALS2P05162 132 aa17.89■□□□□ 0.45
MBD1-207ENST00000398488 ATP2B1P20020 1258 aa17.89■□□□□ 0.45
MBD1-207ENST00000398488 U2AF2P26368 475 aaKnown RBP eCLIP17.89■□□□□ 0.453e-7■■□□□ 12.2
MBD1-207ENST00000398488 CHMP4BP1P59074 171 aa17.89■□□□□ 0.45
MBD1-207ENST00000398488 HIC1Q14526 733 aa17.89■□□□□ 0.45
MBD1-207ENST00000398488 SAFBQ15424 915 aaKnown RBP eCLIP17.89■□□□□ 0.45
MBD1-207ENST00000398488 UTP14CQ5TAP6 766 aaKnown RBP17.89■□□□□ 0.45
MBD1-207ENST00000398488 LARP1BQ659C4 914 aaKnown RBP17.89■□□□□ 0.45
MBD1-207ENST00000398488 MOXD1Q6UVY6 613 aa17.89■□□□□ 0.45
MBD1-207ENST00000398488 HSCBQ8IWL3 235 aa17.89■□□□□ 0.45
MBD1-207ENST00000398488 ETNPPLQ8TBG4 499 aa17.89■□□□□ 0.45
MBD1-207ENST00000398488 SLC5A5Q92911 643 aa17.89■□□□□ 0.45
MBD1-207ENST00000398488 INTS4Q96HW7 963 aaKnown RBP17.89■□□□□ 0.45
MBD1-207ENST00000398488 JPH1Q9HDC5 661 aaPredicted RBP17.89■□□□□ 0.45
MBD1-207ENST00000398488 SLC9A2Q9UBY0 812 aa17.89■□□□□ 0.45
MBD1-207ENST00000398488 DDX25Q9UHL0 483 aaKnown RBP17.89■□□□□ 0.45
MBD1-207ENST00000398488 A0A0U1RQG5 324 aaPredicted RBP17.88■□□□□ 0.45
MBD1-207ENST00000398488 HAS3O00219 553 aa17.88■□□□□ 0.45
MBD1-207ENST00000398488 CABYRO75952 493 aa17.88■□□□□ 0.45
MBD1-207ENST00000398488 F2P00734 622 aa17.88■□□□□ 0.45
MBD1-207ENST00000398488 TOB1P50616 345 aaPredicted RBP17.88■□□□□ 0.45
MBD1-207ENST00000398488 ACTR2P61160 394 aa17.88■□□□□ 0.45
MBD1-207ENST00000398488 SETQ01105 290 aaPredicted RBP17.88■□□□□ 0.45
MBD1-207ENST00000398488 NBR1Q14596 966 aa17.88■□□□□ 0.45
MBD1-207ENST00000398488 BRDTQ58F21 947 aaPredicted RBP17.88■□□□□ 0.45
MBD1-207ENST00000398488 C1orf53Q5VUE5 145 aa17.88■□□□□ 0.45
MBD1-207ENST00000398488 PPP4R3AQ6IN85 833 aa17.88■□□□□ 0.45
MBD1-207ENST00000398488 SH3RF1Q7Z6J0 888 aa17.88■□□□□ 0.45
MBD1-207ENST00000398488 POTEDQ86YR6 584 aa17.88■□□□□ 0.45
MBD1-207ENST00000398488 GIMAP8Q8ND71 665 aaPredicted RBP17.88■□□□□ 0.45
MBD1-207ENST00000398488 HAS1Q92839 578 aa17.88■□□□□ 0.45
MBD1-207ENST00000398488 NOP56O00567 594 aaKnown RBP17.88■□□□□ 0.45
MBD1-207ENST00000398488 KPNA6O60684 536 aa17.88■□□□□ 0.45
MBD1-207ENST00000398488 PQBP1O60828 265 aaKnown RBP17.88■□□□□ 0.45
MBD1-207ENST00000398488 TCF7P36402 384 aaPredicted RBP17.88■□□□□ 0.45
MBD1-207ENST00000398488 PSEN2P49810 448 aa17.88■□□□□ 0.45
MBD1-207ENST00000398488 NOSTRINQ8IVI9 506 aa17.88■□□□□ 0.45
MBD1-207ENST00000398488 SPRYD3Q8NCJ5 442 aa17.88■□□□□ 0.45
MBD1-207ENST00000398488 SEPT1Q8WYJ6 367 aa17.88■□□□□ 0.45
MBD1-207ENST00000398488 SDF4Q9BRK5 362 aa17.88■□□□□ 0.45
MBD1-207ENST00000398488 TRPV6Q9H1D0 765 aa17.88■□□□□ 0.45
MBD1-207ENST00000398488 PDE4DIPQ5VU43 2346 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms