RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 SNHG28P0DPA3 235 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 TOP1P11387 765 aaKnown RBP4.39□□□□□ -1.71
UBE3A-202ENST00000397954 PTPN11Q06124 597 aaPredicted RBP4.39□□□□□ -1.71
UBE3A-202ENST00000397954 APOBRQ0VD83 1088 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 IFRD2Q12894 506 aaPredicted RBP4.39□□□□□ -1.71
UBE3A-202ENST00000397954 FOXD4Q12950 439 aaPredicted RBP4.39□□□□□ -1.71
UBE3A-202ENST00000397954 COG2Q14746 738 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 IMMTQ16891 758 aaKnown RBP4.39□□□□□ -1.71
UBE3A-202ENST00000397954 CTC1Q2NKJ3 1217 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 MTERF2Q49AM1 385 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 AXDND1Q5T1B0 1012 aaPredicted RBP4.39□□□□□ -1.71
UBE3A-202ENST00000397954 CCDC129Q6ZRS4 1044 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 DDX42Q86XP3 938 aaKnown RBP eCLIP4.39□□□□□ -1.71
UBE3A-202ENST00000397954 NME8Q8N427 588 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 GOLM1Q8NBJ4 401 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 CCDC136Q96JN2 1154 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 TMEM87BQ96K49 555 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 RHOVQ96L33 236 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 HTATIP2Q9BUP3 242 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 RSRP1Q9BUV0 290 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 DDX4Q9NQI0 724 aaKnown RBP4.39□□□□□ -1.71
UBE3A-202ENST00000397954 LATS2Q9NRM7 1088 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 SHTN1A0MZ66 631 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 SOWAHBA6NEL2 793 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 DDTLA6NHG4 134 aaPredicted RBP4.38□□□□□ -1.71
UBE3A-202ENST00000397954 GSG1L2A8MUP6 293 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 B2RBV5 119 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 TSPAN6O43657 245 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 DDAH1O94760 285 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 SCGB1D2O95969 90 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 CDK8P49336 464 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 GRB14Q14449 540 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 NFE2Q16621 373 aaPredicted RBP4.38□□□□□ -1.71
UBE3A-202ENST00000397954 C2orf27AQ580R0 203 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 MAP3K21Q5TCX8 1036 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 LARP1BQ659C4 914 aaKnown RBP4.38□□□□□ -1.71
UBE3A-202ENST00000397954 CTR9Q6PD62 1173 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 MAMDC4Q6UXC1 1216 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 C14orf80Q86SX3 495 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 IQCA1Q86XH1 822 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 IFNL3Q8IZI9 196 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 ZNF444Q8N0Y2 327 aaPredicted RBP4.38□□□□□ -1.71
UBE3A-202ENST00000397954 FBXO27Q8NI29 283 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 TGFBRAP1Q8WUH2 860 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 CCDC8Q9H0W5 538 aaPredicted RBP4.38□□□□□ -1.71
UBE3A-202ENST00000397954 DIAPH3Q9NSV4 1193 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 ABCB11O95342 1321 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 MROH7Q68CQ1 1323 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 F8W031 263 aaPredicted RBP4.38□□□□□ -1.71
UBE3A-202ENST00000397954 EREGO14944 169 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 ZBED4O75132 1171 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 CABYRO75952 493 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 LDHAP00338 332 aaKnown RBP4.38□□□□□ -1.71
UBE3A-202ENST00000397954 SDSP20132 328 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 GARTP22102 1010 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 CST5P28325 142 aaPredicted RBP4.38□□□□□ -1.71
UBE3A-202ENST00000397954 TXLNAP40222 546 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 ICA1Q05084 483 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 PPARAQ07869 468 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 NFIAQ12857 509 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 CRHR2Q13324 411 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 CBX2Q14781 532 aaPredicted RBP4.38□□□□□ -1.71
UBE3A-202ENST00000397954 FBXW10Q5XX13 1052 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 OTOP1Q7RTM1 612 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 THNSL2Q86YJ6 484 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 GLIS3Q8NEA6 775 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 DNERQ8NFT8 737 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 ZNF333Q96JL9 665 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 CCDC113Q9H0I3 377 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 RBM28Q9NW13 759 aaKnown RBP4.38□□□□□ -1.71
UBE3A-202ENST00000397954 MCM9Q9NXL9 1143 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 PPP1R9AQ9ULJ8 1098 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 STRIP2Q9ULQ0 834 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 LCTP09848 1927 aa4.38□□□□□ -1.71
UBE3A-202ENST00000397954 TMEM265A0A087WTH1 108 aa4.37□□□□□ -1.71
UBE3A-202ENST00000397954 IGF2BP3O00425 579 aaKnown RBP eCLIP4.37□□□□□ -1.71
UBE3A-202ENST00000397954 GIPC1O14908 333 aa4.37□□□□□ -1.71
UBE3A-202ENST00000397954 ADH1BP00325 375 aa4.37□□□□□ -1.71
UBE3A-202ENST00000397954 PF4P02776 101 aa4.37□□□□□ -1.71
UBE3A-202ENST00000397954 GJB1P08034 283 aa4.37□□□□□ -1.71
UBE3A-202ENST00000397954 TDO2P48775 406 aa4.37□□□□□ -1.71
UBE3A-202ENST00000397954 WNT7BP56706 349 aa4.37□□□□□ -1.71
UBE3A-202ENST00000397954 AKNAD1Q5T1N1 836 aa4.37□□□□□ -1.71
UBE3A-202ENST00000397954 MFSD14CQ5VZR4 134 aa4.37□□□□□ -1.71
UBE3A-202ENST00000397954 CCDC174Q6PII3 467 aa4.37□□□□□ -1.71
UBE3A-202ENST00000397954 ZNF438Q7Z4V0 828 aa4.37□□□□□ -1.71
UBE3A-202ENST00000397954 PLEKHH3Q7Z736 793 aa4.37□□□□□ -1.71
UBE3A-202ENST00000397954 RELL1Q8IUW5 271 aa4.37□□□□□ -1.71
UBE3A-202ENST00000397954 SNX29Q8TEQ0 813 aa4.37□□□□□ -1.71
UBE3A-202ENST00000397954 OTUD5Q96G74 571 aa4.37□□□□□ -1.71
UBE3A-202ENST00000397954 ABHD8Q96I13 439 aa4.37□□□□□ -1.71
UBE3A-202ENST00000397954 SLF1Q9BQI6 1058 aa4.37□□□□□ -1.71
UBE3A-202ENST00000397954 MXD3Q9BW11 206 aa4.37□□□□□ -1.71
UBE3A-202ENST00000397954 NT5C1AQ9BXI3 368 aa4.37□□□□□ -1.71
UBE3A-202ENST00000397954 MCOLN1Q9GZU1 580 aa4.37□□□□□ -1.71
UBE3A-202ENST00000397954 UBA5Q9GZZ9 404 aa4.37□□□□□ -1.71
UBE3A-202ENST00000397954 RBSNQ9H1K0 784 aa4.37□□□□□ -1.71
UBE3A-202ENST00000397954 EHMT1Q9H9B1 1298 aa4.37□□□□□ -1.71
UBE3A-202ENST00000397954 TLR7Q9NYK1 1049 aaKnown RBP4.37□□□□□ -1.71
UBE3A-202ENST00000397954 CDV3Q9UKY7 258 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms