RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 TREHO43280 583 aa18.73■□□□□ 0.59
CUX2-202ENST00000397643 DHX16O60231 1041 aaKnown RBP18.73■□□□□ 0.59
CUX2-202ENST00000397643 SMIM10L2AP0DMW4 78 aa18.73■□□□□ 0.59
CUX2-202ENST00000397643 SMIM10L2BP0DMW5 78 aa18.73■□□□□ 0.59
CUX2-202ENST00000397643 SDSP20132 328 aa18.73■□□□□ 0.59
CUX2-202ENST00000397643 ZP2Q05996 745 aa18.73■□□□□ 0.59
CUX2-202ENST00000397643 SLC35G1Q2M3R5 365 aa18.73■□□□□ 0.59
CUX2-202ENST00000397643 KCNV1Q6PIU1 500 aa18.73■□□□□ 0.59
CUX2-202ENST00000397643 ATP6V0A1Q93050 837 aa18.73■□□□□ 0.59
CUX2-202ENST00000397643 YME1L1Q96TA2 773 aa18.73■□□□□ 0.59
CUX2-202ENST00000397643 BCAS3Q9H6U6 928 aa18.73■□□□□ 0.59
CUX2-202ENST00000397643 ZSWIM5Q9P217 1185 aa18.73■□□□□ 0.59
CUX2-202ENST00000397643 ZBTB47Q9UFB7 747 aaPredicted RBP18.73■□□□□ 0.59
CUX2-202ENST00000397643 C5orf42Q9H799 3197 aa18.72■□□□□ 0.59
CUX2-202ENST00000397643 C17orf102A2RUQ5 167 aa18.72■□□□□ 0.59
CUX2-202ENST00000397643 C19orf67A6NJJ6 358 aa18.72■□□□□ 0.59
CUX2-202ENST00000397643 DCXO43602 365 aa18.72■□□□□ 0.59
CUX2-202ENST00000397643 LGALS2P05162 132 aa18.72■□□□□ 0.59
CUX2-202ENST00000397643 HOXA13P31271 388 aaPredicted RBP18.72■□□□□ 0.59
CUX2-202ENST00000397643 MFAP1P55081 439 aaKnown RBP18.72■□□□□ 0.59
CUX2-202ENST00000397643 GPM6BQ13491 265 aa18.72■□□□□ 0.59
CUX2-202ENST00000397643 TMEM192Q8IY95 271 aa18.72■□□□□ 0.59
CUX2-202ENST00000397643 SEPT8Q92599 483 aa18.72■□□□□ 0.59
CUX2-202ENST00000397643 ZFP91Q96JP5 570 aaPredicted RBP18.72■□□□□ 0.59
CUX2-202ENST00000397643 RNPEPQ9H4A4 650 aa18.72■□□□□ 0.59
CUX2-202ENST00000397643 NSUN3Q9H649 340 aaKnown RBP18.72■□□□□ 0.59
CUX2-202ENST00000397643 MAP3K20Q9NYL2 800 aaKnown RBP18.72■□□□□ 0.59
CUX2-202ENST00000397643 TRIM6-TRIM34B2RNG4 842 aa18.71■□□□□ 0.59
CUX2-202ENST00000397643 H3BRB1 525 aa18.71■□□□□ 0.59
CUX2-202ENST00000397643 CAND2O75155 1236 aa18.71■□□□□ 0.59
CUX2-202ENST00000397643 CTSHP09668 335 aa18.71■□□□□ 0.59
CUX2-202ENST00000397643 LINC00271P0C7V0 271 aa18.71■□□□□ 0.59
CUX2-202ENST00000397643 TGFB3P10600 412 aa18.71■□□□□ 0.59
CUX2-202ENST00000397643 RILPL2Q969X0 211 aa18.71■□□□□ 0.59
CUX2-202ENST00000397643 TUT1Q9H6E5 874 aaKnown RBP18.71■□□□□ 0.59
CUX2-202ENST00000397643 PPP4R2Q9NY27 417 aa18.71■□□□□ 0.59
CUX2-202ENST00000397643 TRIOO75962 3097 aa18.71■□□□□ 0.59
CUX2-202ENST00000397643 ZBTB5O15062 677 aa18.7■□□□□ 0.58
CUX2-202ENST00000397643 LTBRP36941 435 aa18.7■□□□□ 0.58
CUX2-202ENST00000397643 CCDC136Q96JN2 1154 aa18.7■□□□□ 0.58
CUX2-202ENST00000397643 UIMC1Q96RL1 719 aa18.7■□□□□ 0.58
CUX2-202ENST00000397643 LNPKQ9C0E8 428 aa18.7■□□□□ 0.58
CUX2-202ENST00000397643 PRKAG3Q9UGI9 489 aa18.7■□□□□ 0.58
CUX2-202ENST00000397643 MAD2L2Q9UI95 211 aa18.7■□□□□ 0.58
CUX2-202ENST00000397643 PCDHA1Q9Y5I3 950 aa18.7■□□□□ 0.58
CUX2-202ENST00000397643 KLRF2D3W0D1 207 aa18.69■□□□□ 0.58
CUX2-202ENST00000397643 UPP2O95045 317 aa18.69■□□□□ 0.58
CUX2-202ENST00000397643 IGHDP01880 384 aa18.69■□□□□ 0.58
CUX2-202ENST00000397643 CCND2P30279 289 aa18.69■□□□□ 0.58
CUX2-202ENST00000397643 ADAM17P78536 824 aa18.69■□□□□ 0.58
CUX2-202ENST00000397643 NHLH1Q02575 133 aa18.69■□□□□ 0.58
CUX2-202ENST00000397643 SEMA3FQ13275 785 aa18.69■□□□□ 0.58
CUX2-202ENST00000397643 SEC23AQ15436 765 aa18.69■□□□□ 0.58
CUX2-202ENST00000397643 CTC1Q2NKJ3 1217 aa18.69■□□□□ 0.58
CUX2-202ENST00000397643 SAMD3Q8N6K7 520 aa18.69■□□□□ 0.58
CUX2-202ENST00000397643 IFIH1Q9BYX4 1025 aaKnown RBP18.69■□□□□ 0.58
CUX2-202ENST00000397643 MLXIPQ9HAP2 919 aa18.69■□□□□ 0.58
CUX2-202ENST00000397643 RC3H2Q9HBD1 1191 aaKnown RBP18.69■□□□□ 0.58
CUX2-202ENST00000397643 TELO2Q9Y4R8 837 aa18.69■□□□□ 0.58
CUX2-202ENST00000397643 FRMPD4Q14CM0 1322 aa18.69■□□□□ 0.58
CUX2-202ENST00000397643 DOCK5Q9H7D0 1870 aa18.69■□□□□ 0.58
CUX2-202ENST00000397643 PALM3A6NDB9 673 aaPredicted RBP18.68■□□□□ 0.58
CUX2-202ENST00000397643 C5orf67F2Z3F1 127 aa18.68■□□□□ 0.58
CUX2-202ENST00000397643 MRE11P49959 708 aa18.68■□□□□ 0.58
CUX2-202ENST00000397643 CWC27Q6UX04 472 aaKnown RBP18.68■□□□□ 0.58
CUX2-202ENST00000397643 RPAINQ86UA6 219 aa18.68■□□□□ 0.58
CUX2-202ENST00000397643 TRIM50Q86XT4 487 aa18.68■□□□□ 0.58
CUX2-202ENST00000397643 ADHFE1Q8IWW8 467 aa18.68■□□□□ 0.58
CUX2-202ENST00000397643 FBXL18Q96ME1 805 aa18.68■□□□□ 0.58
CUX2-202ENST00000397643 DSCC1Q9BVC3 393 aa18.68■□□□□ 0.58
CUX2-202ENST00000397643 SETD4Q9NVD3 440 aa18.68■□□□□ 0.58
CUX2-202ENST00000397643 CLDND1Q9NY35 253 aa18.68■□□□□ 0.58
CUX2-202ENST00000397643 BAZ2BQ9UIF8 2168 aaKnown RBP18.68■□□□□ 0.58
CUX2-202ENST00000397643 ICAM3P32942 547 aa18.67■□□□□ 0.58
CUX2-202ENST00000397643 IRS1P35568 1242 aa18.67■□□□□ 0.58
CUX2-202ENST00000397643 MRPS9P82933 396 aaKnown RBP18.67■□□□□ 0.58
CUX2-202ENST00000397643 DLX2Q07687 328 aaPredicted RBP18.67■□□□□ 0.58
CUX2-202ENST00000397643 CSPP1Q1MSJ5 1256 aa18.67■□□□□ 0.58
CUX2-202ENST00000397643 FAM26DQ5JW98 314 aa18.67■□□□□ 0.58
CUX2-202ENST00000397643 IFIT1BQ5T764 474 aaKnown RBP18.67■□□□□ 0.58
CUX2-202ENST00000397643 METTL7BQ6UX53 244 aa18.67■□□□□ 0.58
CUX2-202ENST00000397643 APBB2Q92870 758 aa18.67■□□□□ 0.58
CUX2-202ENST00000397643 INPP4AQ96PE3 977 aaPredicted RBP18.67■□□□□ 0.58
CUX2-202ENST00000397643 GPR20Q99678 358 aa18.67■□□□□ 0.58
CUX2-202ENST00000397643 UBAC1Q9BSL1 405 aa18.67■□□□□ 0.58
CUX2-202ENST00000397643 TECTAO75443 2155 aa18.66■□□□□ 0.58
CUX2-202ENST00000397643 GCOM1H8Y6P7 765 aaPredicted RBP18.66■□□□□ 0.58
CUX2-202ENST00000397643 POLR2MP0CAP2 368 aa18.66■□□□□ 0.58
CUX2-202ENST00000397643 HYAL1Q12794 435 aa18.66■□□□□ 0.58
CUX2-202ENST00000397643 SMAD2Q15796 467 aaKnown RBP18.66■□□□□ 0.58
CUX2-202ENST00000397643 EP400NLQ6ZTU2 488 aa18.66■□□□□ 0.58
CUX2-202ENST00000397643 FCHSD1Q86WN1 690 aa18.66■□□□□ 0.58
CUX2-202ENST00000397643 LMBR1Q8WVP7 490 aa18.66■□□□□ 0.58
CUX2-202ENST00000397643 USP26Q9BXU7 913 aa18.66■□□□□ 0.58
CUX2-202ENST00000397643 KRT23Q9C075 422 aa18.66■□□□□ 0.58
CUX2-202ENST00000397643 KCNH6Q9H252 994 aa18.66■□□□□ 0.58
CUX2-202ENST00000397643 RIOX1Q9H6W3 641 aa18.66■□□□□ 0.58
CUX2-202ENST00000397643 FAM50BQ9Y247 325 aa18.66■□□□□ 0.58
CUX2-202ENST00000397643 SPATA31C2B4DYI2 1134 aa18.65■□□□□ 0.58
CUX2-202ENST00000397643 GRM6O15303 877 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms