RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 AOPEPQ8N6M6 819 aa16.78■□□□□ 0.28
CAPN3-207ENST00000397200 CNNM3Q8NE01 707 aa16.78■□□□□ 0.28
CAPN3-207ENST00000397200 NPLOC4Q8TAT6 608 aa16.78■□□□□ 0.28
CAPN3-207ENST00000397200 MAML3Q96JK9 1138 aa16.78■□□□□ 0.28
CAPN3-207ENST00000397200 ZFP91Q96JP5 570 aaPredicted RBP16.78■□□□□ 0.28
CAPN3-207ENST00000397200 CSRNP2Q9H175 543 aa16.78■□□□□ 0.28
CAPN3-207ENST00000397200 CEP350Q5VT06 3117 aa16.77■□□□□ 0.27
CAPN3-207ENST00000397200 BECN2A8MW95 431 aa16.77■□□□□ 0.27
CAPN3-207ENST00000397200 FAM86B1E9PN63 330 aa16.77■□□□□ 0.27
CAPN3-207ENST00000397200 IKBKBO14920 756 aa16.77■□□□□ 0.27
CAPN3-207ENST00000397200 ACTN4O43707 911 aaKnown RBP16.77■□□□□ 0.27
CAPN3-207ENST00000397200 NEMFO60524 1076 aa16.77■□□□□ 0.27
CAPN3-207ENST00000397200 GNRH1P01148 92 aa16.77■□□□□ 0.27
CAPN3-207ENST00000397200 FAM86B2P0C5J1 330 aa16.77■□□□□ 0.27
CAPN3-207ENST00000397200 PRR16Q569H4 304 aa16.77■□□□□ 0.27
CAPN3-207ENST00000397200 MBOAT7Q96N66 472 aa16.77■□□□□ 0.27
CAPN3-207ENST00000397200 MXRA8Q9BRK3 442 aa16.77■□□□□ 0.27
CAPN3-207ENST00000397200 CASP8AP2Q9UKL3 1982 aa16.77■□□□□ 0.27
CAPN3-207ENST00000397200 KIAA1217Q5T5P2 1943 aa16.76■□□□□ 0.27
CAPN3-207ENST00000397200 SLC37A4O43826 429 aa16.76■□□□□ 0.27
CAPN3-207ENST00000397200 EIF3JO75822 258 aaKnown RBP16.76■□□□□ 0.27
CAPN3-207ENST00000397200 SETQ01105 290 aaPredicted RBP16.76■□□□□ 0.27
CAPN3-207ENST00000397200 CAP1Q01518 475 aa16.76■□□□□ 0.27
CAPN3-207ENST00000397200 PRKCZQ05513 592 aa16.76■□□□□ 0.27
CAPN3-207ENST00000397200 PNOCQ13519 176 aa16.76■□□□□ 0.27
CAPN3-207ENST00000397200 NCAPHQ15003 741 aa16.76■□□□□ 0.27
CAPN3-207ENST00000397200 ZRSR1Q15695 479 aaKnown RBP16.76■□□□□ 0.27
CAPN3-207ENST00000397200 Q4G0T1 1027 aa16.76■□□□□ 0.27
CAPN3-207ENST00000397200 ARMCX2Q7L311 632 aa16.76■□□□□ 0.27
CAPN3-207ENST00000397200 CYP2W1Q8TAV3 490 aa16.76■□□□□ 0.27
CAPN3-207ENST00000397200 MORC4Q8TE76 937 aa16.76■□□□□ 0.27
CAPN3-207ENST00000397200 TRIM5Q9C035 493 aa16.76■□□□□ 0.27
CAPN3-207ENST00000397200 KCNF1Q9H3M0 494 aa16.76■□□□□ 0.27
CAPN3-207ENST00000397200 HOOK1Q9UJC3 728 aaKnown RBP16.76■□□□□ 0.27
CAPN3-207ENST00000397200 GABRQQ9UN88 632 aa16.76■□□□□ 0.27
CAPN3-207ENST00000397200 UBIAD1Q9Y5Z9 338 aa16.76■□□□□ 0.27
CAPN3-207ENST00000397200 IGLV3-22A0A075B6J6 115 aa16.75■□□□□ 0.27
CAPN3-207ENST00000397200 MEIS1O00470 390 aa16.75■□□□□ 0.27
CAPN3-207ENST00000397200 OFD1O75665 1012 aa16.75■□□□□ 0.27
CAPN3-207ENST00000397200 ITGB5P18084 799 aa16.75■□□□□ 0.27
CAPN3-207ENST00000397200 FLT3LGP49771 235 aa16.75■□□□□ 0.27
CAPN3-207ENST00000397200 PTGDRQ13258 359 aa16.75■□□□□ 0.27
CAPN3-207ENST00000397200 GNPTABQ3T906 1256 aa16.75■□□□□ 0.27
CAPN3-207ENST00000397200 KANK3Q6NY19 840 aa16.75■□□□□ 0.27
CAPN3-207ENST00000397200 MAMDC4Q6UXC1 1216 aa16.75■□□□□ 0.27
CAPN3-207ENST00000397200 NIPA1Q7RTP0 329 aa16.75■□□□□ 0.27
CAPN3-207ENST00000397200 NLRX1Q86UT6 975 aa16.75■□□□□ 0.27
CAPN3-207ENST00000397200 POTEDQ86YR6 584 aa16.75■□□□□ 0.27
CAPN3-207ENST00000397200 MSL3Q8N5Y2 521 aaKnown RBP16.75■□□□□ 0.27
CAPN3-207ENST00000397200 SPATA20Q8TB22 786 aa16.75■□□□□ 0.27
CAPN3-207ENST00000397200 TINF2Q9BSI4 451 aa16.75■□□□□ 0.27
CAPN3-207ENST00000397200 JADE2Q9NQC1 790 aa16.75■□□□□ 0.27
CAPN3-207ENST00000397200 SRRDQ9UH36 339 aa16.75■□□□□ 0.27
CAPN3-207ENST00000397200 SYNGAP1Q96PV0 1343 aa16.75■□□□□ 0.27
CAPN3-207ENST00000397200 LAD1O00515 517 aa16.74■□□□□ 0.27
CAPN3-207ENST00000397200 POLR2DO15514 142 aaKnown RBP16.74■□□□□ 0.27
CAPN3-207ENST00000397200 MARCH6O60337 910 aa16.74■□□□□ 0.27
CAPN3-207ENST00000397200 XRCC5P13010 732 aaKnown RBP16.74■□□□□ 0.27
CAPN3-207ENST00000397200 SARSP49591 514 aaKnown RBP16.74■□□□□ 0.27
CAPN3-207ENST00000397200 MTMR1Q13613 665 aa16.74■□□□□ 0.27
CAPN3-207ENST00000397200 POSTNQ15063 836 aa16.74■□□□□ 0.27
CAPN3-207ENST00000397200 CALCRLQ16602 461 aa16.74■□□□□ 0.27
CAPN3-207ENST00000397200 SPECC1Q5M775 1068 aa16.74■□□□□ 0.27
CAPN3-207ENST00000397200 OLFML2BQ68BL8 750 aa16.74■□□□□ 0.27
CAPN3-207ENST00000397200 LENG9Q96B70 501 aa16.74■□□□□ 0.27
CAPN3-207ENST00000397200 GPRASP2Q96D09 838 aa16.74■□□□□ 0.27
CAPN3-207ENST00000397200 INPP4AQ96PE3 977 aaPredicted RBP16.74■□□□□ 0.27
CAPN3-207ENST00000397200 WDR11Q9BZH6 1224 aa16.74■□□□□ 0.27
CAPN3-207ENST00000397200 TTC12Q9H892 705 aaPredicted RBP16.74■□□□□ 0.27
CAPN3-207ENST00000397200 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.74■□□□□ 0.27
CAPN3-207ENST00000397200 OR52Z1P0C646 297 aa16.74■□□□□ 0.27
CAPN3-207ENST00000397200 ARL6IP4Q66PJ3 421 aaKnown RBP16.74■□□□□ 0.27
CAPN3-207ENST00000397200 USP49Q70CQ1 688 aa16.74■□□□□ 0.27
CAPN3-207ENST00000397200 EEPD1Q7L9B9 569 aa16.74■□□□□ 0.27
CAPN3-207ENST00000397200 SH3RF1Q7Z6J0 888 aa16.74■□□□□ 0.27
CAPN3-207ENST00000397200 C4orf32Q8N8J7 132 aa16.74■□□□□ 0.27
CAPN3-207ENST00000397200 TRIML1Q8N9V2 468 aa16.74■□□□□ 0.27
CAPN3-207ENST00000397200 TMEM60Q9H2L4 133 aa16.74■□□□□ 0.27
CAPN3-207ENST00000397200 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.74■□□□□ 0.27
CAPN3-207ENST00000397200 SERTAD1Q9UHV2 236 aa16.74■□□□□ 0.27
CAPN3-207ENST00000397200 PCDHA5Q9Y5H7 936 aa16.74■□□□□ 0.27
CAPN3-207ENST00000397200 SMTNL1A8MU46 457 aa16.73■□□□□ 0.27
CAPN3-207ENST00000397200 BIN1O00499 593 aa16.73■□□□□ 0.27
CAPN3-207ENST00000397200 CCL14Q16627 93 aa16.73■□□□□ 0.27
CAPN3-207ENST00000397200 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.73■□□□□ 0.27
CAPN3-207ENST00000397200 SEPT14Q6ZU15 432 aa16.73■□□□□ 0.27
CAPN3-207ENST00000397200 SPC24Q8NBT2 197 aa16.73■□□□□ 0.27
CAPN3-207ENST00000397200 CDHR1Q96JP9 859 aa16.73■□□□□ 0.27
CAPN3-207ENST00000397200 FLRT1Q9NZU1 646 aa16.73■□□□□ 0.27
CAPN3-207ENST00000397200 A0A087X0B3 334 aa16.72■□□□□ 0.27
CAPN3-207ENST00000397200 TBX3O15119 743 aa16.72■□□□□ 0.27
CAPN3-207ENST00000397200 MSH4O15457 936 aa16.72■□□□□ 0.27
CAPN3-207ENST00000397200 MAFGO15525 162 aa16.72■□□□□ 0.27
CAPN3-207ENST00000397200 RGS20O76081 388 aa16.72■□□□□ 0.27
CAPN3-207ENST00000397200 ARP10275 920 aa16.72■□□□□ 0.27
CAPN3-207ENST00000397200 PRPHP41219 470 aa16.72■□□□□ 0.27
CAPN3-207ENST00000397200 IRF5Q13568 498 aa16.72■□□□□ 0.27
CAPN3-207ENST00000397200 FBXO16Q8IX29 292 aaPredicted RBP16.72■□□□□ 0.27
CAPN3-207ENST00000397200 TRMT44Q8IYL2 757 aaKnown RBP16.72■□□□□ 0.27
CAPN3-207ENST00000397200 ETNPPLQ8TBG4 499 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms