RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 SLC5A4Q9NY91 659 aa16.7■□□□□ 0.26
TM9SF1-202ENST00000396854 GJD2Q9UKL4 321 aa16.7■□□□□ 0.26
TM9SF1-202ENST00000396854 ASB14A6NK59 587 aa16.69■□□□□ 0.26
TM9SF1-202ENST00000396854 EIF3JO75822 258 aaKnown RBP16.69■□□□□ 0.26
TM9SF1-202ENST00000396854 IQCB1Q15051 598 aa16.69■□□□□ 0.26
TM9SF1-202ENST00000396854 STX1AQ16623 288 aa16.69■□□□□ 0.26
TM9SF1-202ENST00000396854 ENGASEQ8NFI3 743 aa16.69■□□□□ 0.26
TM9SF1-202ENST00000396854 HAS1Q92839 578 aa16.69■□□□□ 0.26
TM9SF1-202ENST00000396854 GPR25O00155 361 aa16.69■□□□□ 0.26
TM9SF1-202ENST00000396854 MSH4O15457 936 aa16.69■□□□□ 0.26
TM9SF1-202ENST00000396854 CUTAO60888 179 aa16.69■□□□□ 0.26
TM9SF1-202ENST00000396854 PSMC4P43686 418 aa16.69■□□□□ 0.26
TM9SF1-202ENST00000396854 FAM160A1Q05DH4 1040 aa16.69■□□□□ 0.26
TM9SF1-202ENST00000396854 PDE4DQ08499 809 aa16.69■□□□□ 0.26
TM9SF1-202ENST00000396854 MAMDC4Q6UXC1 1216 aa16.69■□□□□ 0.26
TM9SF1-202ENST00000396854 SLFN12Q8IYM2 578 aa16.69■□□□□ 0.26
TM9SF1-202ENST00000396854 DNAJC5GQ8N7S2 189 aa16.69■□□□□ 0.26
TM9SF1-202ENST00000396854 FSIP1Q8NA03 581 aa16.69■□□□□ 0.26
TM9SF1-202ENST00000396854 GPRASP2Q96D09 838 aa16.69■□□□□ 0.26
TM9SF1-202ENST00000396854 MAML3Q96JK9 1138 aa16.69■□□□□ 0.26
TM9SF1-202ENST00000396854 ZFP91Q96JP5 570 aaPredicted RBP16.69■□□□□ 0.26
TM9SF1-202ENST00000396854 TRIM47Q96LD4 638 aa16.69■□□□□ 0.26
TM9SF1-202ENST00000396854 FAM20AQ96MK3 541 aa16.69■□□□□ 0.26
TM9SF1-202ENST00000396854 MAFGO15525 162 aa16.68■□□□□ 0.26
TM9SF1-202ENST00000396854 RGS2P41220 211 aa16.68■□□□□ 0.26
TM9SF1-202ENST00000396854 MTMR1Q13613 665 aa16.68■□□□□ 0.26
TM9SF1-202ENST00000396854 KIF22Q14807 665 aa16.68■□□□□ 0.26
TM9SF1-202ENST00000396854 IL17AQ16552 155 aa16.68■□□□□ 0.26
TM9SF1-202ENST00000396854 DTHD1Q6ZMT9 781 aa16.68■□□□□ 0.26
TM9SF1-202ENST00000396854 CCDC186Q7Z3E2 898 aa16.68■□□□□ 0.26
TM9SF1-202ENST00000396854 NLRX1Q86UT6 975 aa16.68■□□□□ 0.26
TM9SF1-202ENST00000396854 MSL3Q8N5Y2 521 aaKnown RBP16.68■□□□□ 0.26
TM9SF1-202ENST00000396854 ZNF579Q8NAF0 562 aaKnown RBP16.68■□□□□ 0.26
TM9SF1-202ENST00000396854 NPLOC4Q8TAT6 608 aa16.68■□□□□ 0.26
TM9SF1-202ENST00000396854 WDR11Q9BZH6 1224 aa16.68■□□□□ 0.26
TM9SF1-202ENST00000396854 ARHGAP39Q9C0H5 1083 aa16.68■□□□□ 0.26
TM9SF1-202ENST00000396854 DOCK5Q9H7D0 1870 aa16.68■□□□□ 0.26
TM9SF1-202ENST00000396854 PCNTO95613 3336 aa16.68■□□□□ 0.26
TM9SF1-202ENST00000396854 RGS20O76081 388 aa16.68■□□□□ 0.26
TM9SF1-202ENST00000396854 ARP10275 920 aa16.68■□□□□ 0.26
TM9SF1-202ENST00000396854 FXR2P51116 673 aaKnown RBP eCLIP16.68■□□□□ 0.26
TM9SF1-202ENST00000396854 GRIN1Q05586 938 aa16.68■□□□□ 0.26
TM9SF1-202ENST00000396854 GNPTABQ3T906 1256 aa16.68■□□□□ 0.26
TM9SF1-202ENST00000396854 SLC5A5Q92911 643 aa16.68■□□□□ 0.26
TM9SF1-202ENST00000396854 KCNH7Q9NS40 1196 aa16.68■□□□□ 0.26
TM9SF1-202ENST00000396854 VWA3AA6NCI4 1184 aa16.67■□□□□ 0.26
TM9SF1-202ENST00000396854 KINO60870 393 aaKnown RBP16.67■□□□□ 0.26
TM9SF1-202ENST00000396854 ICAM3P32942 547 aa16.67■□□□□ 0.26
TM9SF1-202ENST00000396854 ARMCX2Q7L311 632 aa16.67■□□□□ 0.26
TM9SF1-202ENST00000396854 DRC7Q8IY82 874 aa16.67■□□□□ 0.26
TM9SF1-202ENST00000396854 CDHR1Q96JP9 859 aa16.67■□□□□ 0.26
TM9SF1-202ENST00000396854 CLIC6Q96NY7 704 aa16.67■□□□□ 0.26
TM9SF1-202ENST00000396854 APBA2Q99767 749 aa16.67■□□□□ 0.26
TM9SF1-202ENST00000396854 SYNGAP1Q96PV0 1343 aa16.67■□□□□ 0.26
TM9SF1-202ENST00000396854 FAM237AA0A1B0GTK4 181 aa16.66■□□□□ 0.26
TM9SF1-202ENST00000396854 ECM2O94769 699 aaPredicted RBP16.66■□□□□ 0.26
TM9SF1-202ENST00000396854 CMA1P23946 247 aa16.66■□□□□ 0.26
TM9SF1-202ENST00000396854 LONP1P36776 959 aaKnown RBP16.66■□□□□ 0.26
TM9SF1-202ENST00000396854 TXKP42681 527 aa16.66■□□□□ 0.26
TM9SF1-202ENST00000396854 C11orf57Q6ZUT1 292 aaPredicted RBP16.66■□□□□ 0.26
TM9SF1-202ENST00000396854 FMR1NBQ8N0W7 255 aaPredicted RBP16.66■□□□□ 0.26
TM9SF1-202ENST00000396854 AGO4Q9HCK5 861 aaKnown RBP16.66■□□□□ 0.26
TM9SF1-202ENST00000396854 GOLGA6L19H0YKK7 550 aa16.66■□□□□ 0.26
TM9SF1-202ENST00000396854 CAP1Q01518 475 aa16.66■□□□□ 0.26
TM9SF1-202ENST00000396854 SEMA3FQ13275 785 aa16.66■□□□□ 0.26
TM9SF1-202ENST00000396854 TMEM266Q2M3C6 531 aa16.66■□□□□ 0.26
TM9SF1-202ENST00000396854 IGSF22Q8N9C0 903 aa16.66■□□□□ 0.26
TM9SF1-202ENST00000396854 MRFAP1L1Q96HT8 127 aa16.66■□□□□ 0.26
TM9SF1-202ENST00000396854 TINF2Q9BSI4 451 aa16.66■□□□□ 0.26
TM9SF1-202ENST00000396854 ZNF577Q9BSK1 485 aa16.66■□□□□ 0.26
TM9SF1-202ENST00000396854 BEGAINQ9BUH8 593 aa16.66■□□□□ 0.26
TM9SF1-202ENST00000396854 CSRNP2Q9H175 543 aa16.66■□□□□ 0.26
TM9SF1-202ENST00000396854 WBP1LQ9NX94 342 aa16.66■□□□□ 0.26
TM9SF1-202ENST00000396854 PCDHA12Q9UN75 941 aa16.66■□□□□ 0.26
TM9SF1-202ENST00000396854 WDR81Q562E7 1941 aa16.65■□□□□ 0.26
TM9SF1-202ENST00000396854 SPATA31C2B4DYI2 1134 aa16.65■□□□□ 0.26
TM9SF1-202ENST00000396854 IPO5O00410 1097 aaKnown RBP16.65■□□□□ 0.26
TM9SF1-202ENST00000396854 MARCH6O60337 910 aa16.65■□□□□ 0.26
TM9SF1-202ENST00000396854 IGHA2P01877 340 aa16.65■□□□□ 0.26
TM9SF1-202ENST00000396854 XRCC5P13010 732 aaKnown RBP16.65■□□□□ 0.26
TM9SF1-202ENST00000396854 OLFML2BQ68BL8 750 aa16.65■□□□□ 0.26
TM9SF1-202ENST00000396854 SHC4Q6S5L8 630 aa16.65■□□□□ 0.26
TM9SF1-202ENST00000396854 ERO1AQ96HE7 468 aa16.65■□□□□ 0.26
TM9SF1-202ENST00000396854 AK8Q96MA6 479 aa16.65■□□□□ 0.26
TM9SF1-202ENST00000396854 RIT2Q99578 217 aa16.65■□□□□ 0.26
TM9SF1-202ENST00000396854 ANO10Q9NW15 660 aa16.65■□□□□ 0.26
TM9SF1-202ENST00000396854 NRBP1Q9UHY1 535 aa16.65■□□□□ 0.26
TM9SF1-202ENST00000396854 FKTNO75072 461 aa16.65■□□□□ 0.26
TM9SF1-202ENST00000396854 PSMD10O75832 226 aa16.65■□□□□ 0.26
TM9SF1-202ENST00000396854 GNRH1P01148 92 aa16.65■□□□□ 0.26
TM9SF1-202ENST00000396854 TECP42680 631 aa16.65■□□□□ 0.26
TM9SF1-202ENST00000396854 PDIA5Q14554 519 aa16.65■□□□□ 0.26
TM9SF1-202ENST00000396854 RESP18Q5W5W9 173 aa16.65■□□□□ 0.26
TM9SF1-202ENST00000396854 CD99L2Q8TCZ2 262 aa16.65■□□□□ 0.26
TM9SF1-202ENST00000396854 GJA10Q969M2 543 aa16.65■□□□□ 0.26
TM9SF1-202ENST00000396854 RAB34Q9BZG1 259 aa16.65■□□□□ 0.26
TM9SF1-202ENST00000396854 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.65■□□□□ 0.26
TM9SF1-202ENST00000396854 VAV3Q9UKW4 847 aa16.65■□□□□ 0.26
TM9SF1-202ENST00000396854 CYP2B6P20813 491 aa16.64■□□□□ 0.25
TM9SF1-202ENST00000396854 SPIRE1Q08AE8 756 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms